Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150009753
Identifier: 150009753
GI number: 150009753
Start: 3832679
End: 3833974
Strand: Direct
Name: 150009753
Synonym: BDI_3168
Alternate gene names: NA
Gene position: 3832679-3833974 (Clockwise)
Preceding gene: 150009752
Following gene: 150009754
Centisome position: 79.66
GC content: 55.4
Gene sequence:
>1296_bases TTGGAGAAGGGAAATAAGGACATAGAGCTGAGGAGCGAGGAGGTGCAGGAGGTGATGGGGCAAGTGCCGGCCTGGATCGT ACGGTGGGGGATAACGCTGTTATTCCTCGTGGTCGTAGCGTTGCTGGTGGGGAGCTGTTTCTTCAAGTATCCTGACGTGA TCACGGCTGACATGACATTGACGGGGCAACATCCCGCAACGGCGGTGGTGACACGGGCGGCGGGGAAGATACAGGAGCTG CTCGTCAGGGATAATCGTCCGGTAAGGCAGGGGGATTGGCTGGCGGTCATAGAGAATCACGCCGACACGGACGATGCCAT CTATCTGGATAAGGCGTTGGAACGATCCGGAAGCGACGTGGATAGCCTGGACAAGGCATTATCAAAGTACAAGGAGCTAT CGCTGGGTGATATGCAAGCGGCTTACTCGGGACTACTGTCGGCGCTCCATGCCTGCGTCAATTACAGGGAGATCGATTAT TATCCGCAAAAAATGGCCTCCATCCGCAAACAGATAGCGTTGTATAAGGCTTACTATAACGAGACCGAACGGCAGCGGAA GACCCTCTCGGAGCAATTCGCCTTGACAAGGCGGCAATACGCCCGGGATTCATTATTGTATAGCCGGTCCGTGATTTCTT CCTACGAGCATGAGACCGCACGGGCTTCCCTGCTGCAAAGCCGTTATTCGCTGGAAGGGGCGTCAGCCTCGGCCGAGAAT CTCCGGATACAGATCGGGGAGCAAGAGCAATCCTTGCTGGATCTGACGCTGGAGCGGAGCGAGAAAGAATTTACGCTACG GCAGGAATTACAGACCGCCCGGGAACAATTGCTGAACAGCATGAACGAGTGGAGGTTGCGTTATTGCCTCATCGCCCCGG TAGGGGGTGTCGTGACTTTCACCAAGTACTGGAATGAGAACCAATATATCCCATCCGGAGAGGTGGCTTTCACCGTCGTG CCGCAAGGCGAGGGCCGGCTGGTGGGGAAGGTGCGCATACCGATAGCACGCTCGGGAAAAGTCCAGAGAGGCCAGCGGGC GATCGTCCGTTTCTCCAATTTCCCGGATCAGGAGTTTGGAGTGGTAAACGGCGTGGTATCGAATATCTCATTGGTCCCCA CCGACGAGTACTATACGGCGGATATCGATTTTCCAGAGGGGCTGAGAACCAATTACGGTATCGACCTGCCCGTCTCGCCC GAGACGCAAGCCTCCGCGGAGATCGTAACGGAAGAATTACGCCTGATCGAACGATTCTTCCTCCCGATCAAACGGATCGT GAAGGAAGGATTTTAA
Upstream 100 bases:
>100_bases AGGGACGCATCAGGAACTCACGGCCTTGCGGGGGACTTATTATAAGTTGGTGAAGAACCAGTTGGAGCTTGGGAATTGAA AATTGAGAATTGAAAATTAG
Downstream 100 bases:
>100_bases AGTCGCTAGGGTCCGTCATGCACCTTGTTTAGAACTATTATAGTTTAATAGCTGTACTGTTAAAACTAAAAACTTATATT TGCATGTTGATAAATAAGAG
Product: putative hemolysin secretion transport system membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MEKGNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQEL LVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDY YPQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAEN LRIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVV PQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSP ETQASAEIVTEELRLIERFFLPIKRIVKEGF
Sequences:
>Translated_431_residues MEKGNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQEL LVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDY YPQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAEN LRIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVV PQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSP ETQASAEIVTEELRLIERFFLPIKRIVKEGF >Mature_431_residues MEKGNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTLTGQHPATAVVTRAAGKIQEL LVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDVDSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDY YPQKMASIRKQIALYKAYYNETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAEN LRIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTFTKYWNENQYIPSGEVAFTVV PQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFGVVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSP ETQASAEIVTEELRLIERFFLPIKRIVKEGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48861; Mature: 48861
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKGNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTL CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEE TGQHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDV ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCH DSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYKAYYN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHH ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LRIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTF EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE TKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFG HEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECEECCCCCCCCHHHHHEECCCCCHHHH VVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPETQASAEIVTEELRLIERFF HHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPIKRIVKEGF HHHHHHHHCCC >Mature Secondary Structure MEKGNKDIELRSEEVQEVMGQVPAWIVRWGITLLFLVVVALLVGSCFFKYPDVITADMTL CCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECEEE TGQHPATAVVTRAAGKIQELLVRDNRPVRQGDWLAVIENHADTDDAIYLDKALERSGSDV ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCH DSLDKALSKYKELSLGDMQAAYSGLLSALHACVNYREIDYYPQKMASIRKQIALYKAYYN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHH ETERQRKTLSEQFALTRRQYARDSLLYSRSVISSYEHETARASLLQSRYSLEGASASAEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC LRIQIGEQEQSLLDLTLERSEKEFTLRQELQTAREQLLNSMNEWRLRYCLIAPVGGVVTF EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE TKYWNENQYIPSGEVAFTVVPQGEGRLVGKVRIPIARSGKVQRGQRAIVRFSNFPDQEFG HEECCCCCCCCCCCEEEEEEECCCCEEEEEEEECEECCCCCCCCHHHHHEECCCCCHHHH VVNGVVSNISLVPTDEYYTADIDFPEGLRTNYGIDLPVSPETQASAEIVTEELRLIERFF HHHHHHHCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LPIKRIVKEGF HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA