Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is 150008221
Identifier: 150008221
GI number: 150008221
Start: 1861080
End: 1861430
Strand: Reverse
Name: 150008221
Synonym: BDI_1587
Alternate gene names: NA
Gene position: 1861430-1861080 (Counterclockwise)
Preceding gene: 150008222
Following gene: 150008220
Centisome position: 38.69
GC content: 40.46
Gene sequence:
>351_bases ATGAATGATTGCATAATTGGATATTTATTTGTTTCTTTGTCAATATTCTATTTTCTTATGAAGTCGAGACAAGAGATCCT AGCGTTATTAAGAGACTTCAAGGTTCGTAAAGGCAAAAAGTACGGAATCTTGAAGATGGGTATCTTTGGCTCTGTAGCTC GTGATCAACAGACGGAAAGCAGTGATGTGGACATTTATTACGAGGGTGAGGCGCAAGGGCTTTTCTCTCTCTCCCATTTG AAAAATGAATTGGAAGAATTGTTGGGAAGCCCGGTGGATATCATCCGTCTTAGAGACCGGATGAATCAGTTGCTTCGTAA ACGAATCGAGAGGGAGGGAATCTATGTTTGA
Upstream 100 bases:
>100_bases CATCATCCCCCTGCTCCCCTTCAAGCAAGGCAAGAGCTTGCGCAATATCCGGCGGGCGATCGTGAAGTATGTGCTGGGGG AGGGGTAGGTGTTTTGGTTT
Downstream 100 bases:
>100_bases TACGGAGTTGGCCTTGGATACCTTGTCGCAGATAAAGGATACTCTTTCAATGATAATGGCAAGAACTTCGCATATTCATA AGGTTGATGATTTTTATATG
Product: putative nucleotidyltransferase
Products: NA
Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Domain-Containing Protein Region; Nucleotidyltransferase; DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Subunit; DNA Polymerase Beta-Like Region; Nucleotidyltransferase Domain Protein
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV
Sequences:
>Translated_116_residues MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV >Mature_116_residues MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13542; Mature: 13542
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCC SDVDIYYEGEAQGLFSLSHLKNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTES CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCC SDVDIYYEGEAQGLFSLSHLKNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA