Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
---|---|
Accession | NC_009615 |
Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008217
Identifier: 150008217
GI number: 150008217
Start: 1856679
End: 1857860
Strand: Reverse
Name: 150008217
Synonym: BDI_1583
Alternate gene names: NA
Gene position: 1857860-1856679 (Counterclockwise)
Preceding gene: 150008218
Following gene: 150008216
Centisome position: 38.61
GC content: 33.67
Gene sequence:
>1182_bases ATGTCTGATGTCTCAAGAATAGATACATATGGTGCAAAGCTGGTTTTACTGCCATATATGTTGGCAATAATTGGCAGTTG TTTGTATACCATTATATTGGGAGTGTATAACGGGGATTTCATACAACGTGATGTGTTATTTCCGTTACCTGCTTTGTTGG TTATAGCTGTATTGACTATCATTCCTTATATAGGTATATATGGATTGTATAAACGGTATAGGTCTAAAGAGACAGAAAAT GTACCCGATAAGTTCAAGGTTGCGATAATTCGCAATATTACATGGCTTTTATTGTTGGTTCATATAGGTCTACTCTTTAC TGGATATGGCCAAATGGGAACTTCGATAGAAATAGACGGCGGATTTTTTTCTTATATCCGTTCGGCTTTCTTCAAGTTGA TGGTACGTCCATGGGTTATTGCTTATTTGCTGATTTCCAATAGCCGTAAAAATCTTGCTGTAACTGTTCTTTTGTTTTCT ATTCACACGATTCTTGCTCATTCTTTAGGAGGGTTCTTTATTCTATTACTCATCTTATTGTTTAGGCAAGGCAAGAAGGT GAAATCTTTTGTGAAGCGAAATTTCTTGTTTGTATTAGCGATACTCTATTTGGTTCCGATTGTTGTCTCTTCCGCTTATA ATGTTCGTGCACAATTAAGGGGACAAGGAGGGATGAGTGAAACTTCAAACATTGATATAATGGTTGGGAAATTATGTGGA CGAATAAGTAGTTTTTCCAACAGTGCCTATATTTTACAGAACTCGTCACAAAATGTTTATGATTTGGAATTAATCCCCGA TTTTTTTTACTTTTATGATACATTACATTATTGGGGATACAGACCTGAGTTTAAGAGTACTGGATTCTATGTGGAAGAGC AAATAAAGCATTCAAAATTAGAAAACAGTTCAACTATGCCTGGTGTCATAGGGGTTTTAATAATGTCATATGTTAAATCT CCTTACATATTTCTTTTTAACCTGTTTCTGATGACTTTTCTTCTTATTATAATATTTAATCTAACAAAGAGGATAGGATT TCCAAATGCTTCTGGAATTGCTTATATTTTAACAATAGAGTTTGCTACAAGTGGAGATATTTCAGCTCTTTCTAATACTA TATATACCCTGCTGATAATATGGTTTACATTGTCTATATCAAACATAATAATATGGAAATGA
Upstream 100 bases:
>100_bases GCATTCTATATATCACCTTATATTGCACGTTTTTTTTATACTTTTTGTCGTTAACTATTGTTGAATCTTATCATAAACAG TTAGCAATTTTATTAGTTTT
Downstream 100 bases:
>100_bases AAAAGAAAAAGAAAGTACTTGTGTTATATCCATCGGGGAATTATCTATATCCTACGACAGGAGGAGAATTATATGATTCT TATCTTTTTAAAAGAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSDVSRIDTYGAKLVLLPYMLAIIGSCLYTIILGVYNGDFIQRDVLFPLPALLVIAVLTIIPYIGIYGLYKRYRSKETEN VPDKFKVAIIRNITWLLLLVHIGLLFTGYGQMGTSIEIDGGFFSYIRSAFFKLMVRPWVIAYLLISNSRKNLAVTVLLFS IHTILAHSLGGFFILLLILLFRQGKKVKSFVKRNFLFVLAILYLVPIVVSSAYNVRAQLRGQGGMSETSNIDIMVGKLCG RISSFSNSAYILQNSSQNVYDLELIPDFFYFYDTLHYWGYRPEFKSTGFYVEEQIKHSKLENSSTMPGVIGVLIMSYVKS PYIFLFNLFLMTFLLIIIFNLTKRIGFPNASGIAYILTIEFATSGDISALSNTIYTLLIIWFTLSISNIIIWK
Sequences:
>Translated_393_residues MSDVSRIDTYGAKLVLLPYMLAIIGSCLYTIILGVYNGDFIQRDVLFPLPALLVIAVLTIIPYIGIYGLYKRYRSKETEN VPDKFKVAIIRNITWLLLLVHIGLLFTGYGQMGTSIEIDGGFFSYIRSAFFKLMVRPWVIAYLLISNSRKNLAVTVLLFS IHTILAHSLGGFFILLLILLFRQGKKVKSFVKRNFLFVLAILYLVPIVVSSAYNVRAQLRGQGGMSETSNIDIMVGKLCG RISSFSNSAYILQNSSQNVYDLELIPDFFYFYDTLHYWGYRPEFKSTGFYVEEQIKHSKLENSSTMPGVIGVLIMSYVKS PYIFLFNLFLMTFLLIIIFNLTKRIGFPNASGIAYILTIEFATSGDISALSNTIYTLLIIWFTLSISNIIIWK >Mature_392_residues SDVSRIDTYGAKLVLLPYMLAIIGSCLYTIILGVYNGDFIQRDVLFPLPALLVIAVLTIIPYIGIYGLYKRYRSKETENV PDKFKVAIIRNITWLLLLVHIGLLFTGYGQMGTSIEIDGGFFSYIRSAFFKLMVRPWVIAYLLISNSRKNLAVTVLLFSI HTILAHSLGGFFILLLILLFRQGKKVKSFVKRNFLFVLAILYLVPIVVSSAYNVRAQLRGQGGMSETSNIDIMVGKLCGR ISSFSNSAYILQNSSQNVYDLELIPDFFYFYDTLHYWGYRPEFKSTGFYVEEQIKHSKLENSSTMPGVIGVLIMSYVKSP YIFLFNLFLMTFLLIIIFNLTKRIGFPNASGIAYILTIEFATSGDISALSNTIYTLLIIWFTLSISNIIIWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44622; Mature: 44490
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVSRIDTYGAKLVLLPYMLAIIGSCLYTIILGVYNGDFIQRDVLFPLPALLVIAVLTI CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH IPYIGIYGLYKRYRSKETENVPDKFKVAIIRNITWLLLLVHIGLLFTGYGQMGTSIEIDG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GFFSYIRSAFFKLMVRPWVIAYLLISNSRKNLAVTVLLFSIHTILAHSLGGFFILLLILL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRQGKKVKSFVKRNFLFVLAILYLVPIVVSSAYNVRAQLRGQGGMSETSNIDIMVGKLCG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCEEHHHHHH RISSFSNSAYILQNSSQNVYDLELIPDFFYFYDTLHYWGYRPEFKSTGFYVEEQIKHSKL HHHHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC ENSSTMPGVIGVLIMSYVKSPYIFLFNLFLMTFLLIIIFNLTKRIGFPNASGIAYILTIE CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE FATSGDISALSNTIYTLLIIWFTLSISNIIIWK EECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure SDVSRIDTYGAKLVLLPYMLAIIGSCLYTIILGVYNGDFIQRDVLFPLPALLVIAVLTI CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHH IPYIGIYGLYKRYRSKETENVPDKFKVAIIRNITWLLLLVHIGLLFTGYGQMGTSIEIDG HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GFFSYIRSAFFKLMVRPWVIAYLLISNSRKNLAVTVLLFSIHTILAHSLGGFFILLLILL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRQGKKVKSFVKRNFLFVLAILYLVPIVVSSAYNVRAQLRGQGGMSETSNIDIMVGKLCG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEECCCCCCCCCCCCCEEHHHHHH RISSFSNSAYILQNSSQNVYDLELIPDFFYFYDTLHYWGYRPEFKSTGFYVEEQIKHSKL HHHHCCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHC ENSSTMPGVIGVLIMSYVKSPYIFLFNLFLMTFLLIIIFNLTKRIGFPNASGIAYILTIE CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEE FATSGDISALSNTIYTLLIIWFTLSISNIIIWK EECCCCHHHHHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA