Click here to switch to the map view.

The map label for this gene is wcaI [C]

Identifier: 150008210

GI number: 150008210

Start: 1846860

End: 1848050

Strand: Reverse

Name: wcaI [C]

Synonym: BDI_1576

Alternate gene names: 150008210

Gene position: 1848050-1846860 (Counterclockwise)

Preceding gene: 150008211

Following gene: 150008207

Centisome position: 38.41

GC content: 49.54

Gene sequence:

>1191_bases
ATGAGGGTCTTGATCGTTTCTCCCTCTTATCTTCCAGAGATCGGTGCGGCACCCTCACGCATTACGAACATGGCGGAGGG
ACTGTCTGGCTTAGGGATAAAGGTGGATGTGTTGACTTGCTTACCCAATTATCCCAAGGGACGTATCTTTGATGGATATA
GGGGGGCTTTTTCCAAGACAGAGGATGTAAACGGGATAACGGTCTTCAGGTACTGGACGTATGCCTCGATCTCGAAGAAA
CCGTTGGTCCGTCTTGCCAGTATGTGCGCTTTCGCCACGACCCTTTGGTGTTTCGCTCTCAAGCGTAAGCGTATAAAATC
TTATGATAAGGTGATCATCCAGACCCCTCCTGTTTTGGCGGCGGCCTCGGCCATGTTGCTTTTTCGTTGCTGCTACCGGA
AAAAGGTGGTACTGAACGTCTCAGACCTTTGGCCATTGTCGGCCGTGGAGCTGGGGGCCATGAAAGAGGGGGGCGTTTAT
CATGGGGTGATGGGGCGTATCGAGCGGTTCCTTTATCGTAAGGCCACGGCCTGTCAAGGGCAGAGTAAGGAGATCGTGGA
TTATATAAAACGGTATGAGCCGGGCAAGGCCTCGTTCTTGTATCGGAATTTGCAGCATCGTTTTGTTTTACCGAATCAAA
CCCCTTCTTCTCGAAAGCCTTTCAGGATCGTCTATGCCGGTTTGCTGGGCGTGGCGCAGAATATATTGGAGTTGATAGAG
TGTGTCGATTTTAAAGGGATGGGAGCGGAGCTTCATTTATTTGGAGGGGGCAATCAAGCCTTGGAGATAGAGGATTATGT
GAGGACACATGATAAAGGGGTCTTTTATCATGGCTCTTTGCCCAAGGAACGGATGCGTGAGGAGCTTACACGTTACCATG
CCTCCATTATCCCCTTGACGGTTCGTATAAGGGGGGCGGTACCTTCTAAATTATTTGATTTGCTGCCGTTAGGCGTTCCT
ATCTTGTTTTGTGGAGGCGGCGAGGGCGAGGAGATTGTAAAGGAGAATCAGTTGGGCCTTGTCTCGGCCCCCGGAGATTA
TGAGCGACTTTCTAAAAATGTACAAGCCATGAGCCACTTGCCGGATGAGGAGTATCGACAGCTAAAAGCGAACTGCTTAA
GATTATCCCAGACGACTTTCTGTTTTGAAAGGCAACTGGAGGTGTACAAACGTTTTTTATCGGCTTTCTAA

Upstream 100 bases:

>100_bases
TTGATGATACTGTTTATTACGATGCGATGAGCAAGGCGGTTAATCCCTATGGGGATGGATTGGCTTGCGGAAGGATCGTG
GAATTTTTGAACCGGAAGGA

Downstream 100 bases:

>100_bases
TTTCAGGATGAAATCCCTTAAACATTTTGCAGGGATGCCCTGTTATAGATATAGTAGTGTGTTTTTCATGGTATTAGATT
TTTAGATTAGTAATTAGGTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Capsular Polysaccharide Biosynthesis F; Glycosyl Transferase Group 1 Protein; Lipopolysaccharide Biosynthesis Protein; LPS Biosynthesis Related Glycosyltransferase; Group 1 Glycosyl Transferase; Group 1 Family Glycosyl Transferase; Glycosyltransferase Group 1 Family; Glycosyltransferase Group 1 Protein; Lipopolysaccharide Biosynthesis Glycosyltransferase; Glycosyltransferase Family 4 Protein; L-Fucosamine Transferase; Group Glycosyltransferase; Group 1 Family Glycosyltransferase; Glycosyl Transferase Family Protein; Glycosil Transferase; CapK Protein; Glycosyltransferase Group 1 Family Protein

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MRVLIVSPSYLPEIGAAPSRITNMAEGLSGLGIKVDVLTCLPNYPKGRIFDGYRGAFSKTEDVNGITVFRYWTYASISKK
PLVRLASMCAFATTLWCFALKRKRIKSYDKVIIQTPPVLAAASAMLLFRCCYRKKVVLNVSDLWPLSAVELGAMKEGGVY
HGVMGRIERFLYRKATACQGQSKEIVDYIKRYEPGKASFLYRNLQHRFVLPNQTPSSRKPFRIVYAGLLGVAQNILELIE
CVDFKGMGAELHLFGGGNQALEIEDYVRTHDKGVFYHGSLPKERMREELTRYHASIIPLTVRIRGAVPSKLFDLLPLGVP
ILFCGGGEGEEIVKENQLGLVSAPGDYERLSKNVQAMSHLPDEEYRQLKANCLRLSQTTFCFERQLEVYKRFLSAF

Sequences:

>Translated_396_residues
MRVLIVSPSYLPEIGAAPSRITNMAEGLSGLGIKVDVLTCLPNYPKGRIFDGYRGAFSKTEDVNGITVFRYWTYASISKK
PLVRLASMCAFATTLWCFALKRKRIKSYDKVIIQTPPVLAAASAMLLFRCCYRKKVVLNVSDLWPLSAVELGAMKEGGVY
HGVMGRIERFLYRKATACQGQSKEIVDYIKRYEPGKASFLYRNLQHRFVLPNQTPSSRKPFRIVYAGLLGVAQNILELIE
CVDFKGMGAELHLFGGGNQALEIEDYVRTHDKGVFYHGSLPKERMREELTRYHASIIPLTVRIRGAVPSKLFDLLPLGVP
ILFCGGGEGEEIVKENQLGLVSAPGDYERLSKNVQAMSHLPDEEYRQLKANCLRLSQTTFCFERQLEVYKRFLSAF
>Mature_396_residues
MRVLIVSPSYLPEIGAAPSRITNMAEGLSGLGIKVDVLTCLPNYPKGRIFDGYRGAFSKTEDVNGITVFRYWTYASISKK
PLVRLASMCAFATTLWCFALKRKRIKSYDKVIIQTPPVLAAASAMLLFRCCYRKKVVLNVSDLWPLSAVELGAMKEGGVY
HGVMGRIERFLYRKATACQGQSKEIVDYIKRYEPGKASFLYRNLQHRFVLPNQTPSSRKPFRIVYAGLLGVAQNILELIE
CVDFKGMGAELHLFGGGNQALEIEDYVRTHDKGVFYHGSLPKERMREELTRYHASIIPLTVRIRGAVPSKLFDLLPLGVP
ILFCGGGEGEEIVKENQLGLVSAPGDYERLSKNVQAMSHLPDEEYRQLKANCLRLSQTTFCFERQLEVYKRFLSAF

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44603; Mature: 44603

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLIVSPSYLPEIGAAPSRITNMAEGLSGLGIKVDVLTCLPNYPKGRIFDGYRGAFSKT
CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
EDVNGITVFRYWTYASISKKPLVRLASMCAFATTLWCFALKRKRIKSYDKVIIQTPPVLA
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHH
AASAMLLFRCCYRKKVVLNVSDLWPLSAVELGAMKEGGVYHGVMGRIERFLYRKATACQG
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QSKEIVDYIKRYEPGKASFLYRNLQHRFVLPNQTPSSRKPFRIVYAGLLGVAQNILELIE
CCHHHHHHHHHCCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CVDFKGMGAELHLFGGGNQALEIEDYVRTHDKGVFYHGSLPKERMREELTRYHASIIPLT
HHCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEEE
VRIRGAVPSKLFDLLPLGVPILFCGGGEGEEIVKENQLGLVSAPGDYERLSKNVQAMSHL
EEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
PDEEYRQLKANCLRLSQTTFCFERQLEVYKRFLSAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVLIVSPSYLPEIGAAPSRITNMAEGLSGLGIKVDVLTCLPNYPKGRIFDGYRGAFSKT
CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
EDVNGITVFRYWTYASISKKPLVRLASMCAFATTLWCFALKRKRIKSYDKVIIQTPPVLA
CCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHH
AASAMLLFRCCYRKKVVLNVSDLWPLSAVELGAMKEGGVYHGVMGRIERFLYRKATACQG
HHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
QSKEIVDYIKRYEPGKASFLYRNLQHRFVLPNQTPSSRKPFRIVYAGLLGVAQNILELIE
CCHHHHHHHHHCCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
CVDFKGMGAELHLFGGGNQALEIEDYVRTHDKGVFYHGSLPKERMREELTRYHASIIPLT
HHCCCCCCCEEEEEECCCCEEEHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHEEEE
VRIRGAVPSKLFDLLPLGVPILFCGGGEGEEIVKENQLGLVSAPGDYERLSKNVQAMSHL
EEEECCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
PDEEYRQLKANCLRLSQTTFCFERQLEVYKRFLSAF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA