| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
Click here to switch to the map view.
The map label for this gene is 150008150
Identifier: 150008150
GI number: 150008150
Start: 1769514
End: 1771292
Strand: Reverse
Name: 150008150
Synonym: BDI_1516
Alternate gene names: NA
Gene position: 1771292-1769514 (Counterclockwise)
Preceding gene: 150008151
Following gene: 150008149
Centisome position: 36.81
GC content: 45.14
Gene sequence:
>1779_bases ATGAAACACAACAAATATATATTAGCGTTGGCTTTTGCCAGTATGCTGACTTTAGGGTCTTGTGGCGATGATTTCTTGGG AAAGGAGCCGCAAGGAGTTTTGACCCCGGAGGCTTTGGCGAATGCTCAAGGTGTGGAGTTGCTGGTTACTAGTGCTTATG CGGGTTTAGCCTCTCCTGTGGAAGGATACGATCCCTATCAAGCTTCTCCGTTTAACTGGGTATGGGGTGGTATTTATGGG GGTGATGCCAACAAGGGATCAGACCCTAACGACCAATCTACGGTGAATGAGATAGAATTGTATAATACATTGTCGACCAA TGGCTATATCAAGCAAAAATGGGTTTGGGTGTATCAAATGAGCAAACGTGTTAACTTGGCTCTTCAGGTCTTGGAAAAAG CGGAGGATATGAAGGAGGAAATTCGCCAAATGCGTAAAGGCGAGTTGAAATTCTTACGAGCCTTGGCTTATTTCGAGGGA ATGCGTGTGTTTGGTGTTTATCTCCCCTATATTGATGAGACTAATCAAGAGAATGACCCAAAGGTGCATAATGACAAAGA TATCTATAGTTTGGTCGTTGCCGACGTGGATGATGCTATAGCGAATTTATCGGATGATCCTAAGGTTGTTGGTGAGGTTG GTCGGGCGAATAAATCCGCAGCGAAGGCTTTGAAGGCTAAGATCTTGATGTGGCATGGTGATTTGGCGGAAGCGCAACCT ATCTTAGCGGATGTGTTGACAAATGGTGTTACGTCTAAGGGTATGGCTTATGGACTGGAAGATGATCTGGACAATAACTT CAATGCTTTGACAGAAAATGGTAAGGAATCCGTTTTTGCGGTACAATACTCAAATGCGGCAGAGAATATGGGGGGGGCTC CCTTCTGTTTAGCTTATCCGCATAATACAGGTCCCGGTGGATGTTGTGGTTTCTACCAGCCTTCTTTTGAGTTGGTGAAT TCGTTCCAAGTAGATGCGAATGGCCTTCCTTACTTGAACGGTGAATATCGTACGAAGAAGAGTGTATCAGTTCGTAACTC CGATAGTTCCCAAGATGCTGTGCTAGCCGTTAACGATAATAACATTGCGGTCGATCCTCGATTGGATTTTGCTGTAGGTC GTTTTGGTATTCCTTATAAGGATTGGGGATTCCCAGAGAATGGTTGGGTACGAGATGCTACGAATGGCGGTATCTTCATG CCGAAAAAGCATGTATATAGCAAGGCTGAGGATGCGGCTGGTATGAAAGCGTTATATGGTGGTTGGGCACCGGGTTCTGC TATGAACTTGCAATATTTAAGTGTTCGTGACTTAACTTTATTATATGCTGAATGCTTGGCTAACGCTGGGAATCTGAAAG GTGCGATGGAGCAGGTTAACAAGATTCGTCGTCGTGCGGCTTTGGATGTTAATATTGTTAAGTTAGATGATGGGACTCCA GCCGCTAATTATAAGATTGCCGAATATCCTTCTTCACATGCCGCATTCTCAAACAAAGATGTTTGTATCAAGGCGATTCG CATGGAGCGTAAGTTAGAGTTGGCTATGGAAGGTGAGCGCTGGTTCGATTTGTCCCGTTGGGGTGGTGATGTGATGGCTA GTGAGTTGAAAGCCTATGTGGACTATGAGAAACAGTATATCTCTAAGTTTGCGGGTGCCTCTTACCTGCCGGCAAATAAG ACAATGTTGCCCGTTCCTGACGATGAGATCTTGACTTTGGGTACAGATCCGGAAACAGGTACTCCGTACTTGGTACAGCC GGAAGCTTGGAGAAACTAA
Upstream 100 bases:
>100_bases TGATATGGGTGGATGGCCTTCAACGATGCGTTTCTTGTTCGGTGTAAATTTCGCTTTCTAATGTTTAGGGATTTGATTAA CTTTTAAAATGAATTTTATT
Downstream 100 bases:
>100_bases AGGTTTATGGCGATAAGGAAGGCAGGGGACTTCCTTATCGTTTTTATTTTGAATGGTGCTTACAGATTCTTGCTCTTAAA GAGTTTGTCTTCTTATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; Ragb/Susd Domain Protein; RagB/SusD Domain-Containing Protein; RagB/SusD Family Protein; SusD/RagB Family Protein; SusD Family Protein; Lipoprotein
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MKHNKYILALAFASMLTLGSCGDDFLGKEPQGVLTPEALANAQGVELLVTSAYAGLASPVEGYDPYQASPFNWVWGGIYG GDANKGSDPNDQSTVNEIELYNTLSTNGYIKQKWVWVYQMSKRVNLALQVLEKAEDMKEEIRQMRKGELKFLRALAYFEG MRVFGVYLPYIDETNQENDPKVHNDKDIYSLVVADVDDAIANLSDDPKVVGEVGRANKSAAKALKAKILMWHGDLAEAQP ILADVLTNGVTSKGMAYGLEDDLDNNFNALTENGKESVFAVQYSNAAENMGGAPFCLAYPHNTGPGGCCGFYQPSFELVN SFQVDANGLPYLNGEYRTKKSVSVRNSDSSQDAVLAVNDNNIAVDPRLDFAVGRFGIPYKDWGFPENGWVRDATNGGIFM PKKHVYSKAEDAAGMKALYGGWAPGSAMNLQYLSVRDLTLLYAECLANAGNLKGAMEQVNKIRRRAALDVNIVKLDDGTP AANYKIAEYPSSHAAFSNKDVCIKAIRMERKLELAMEGERWFDLSRWGGDVMASELKAYVDYEKQYISKFAGASYLPANK TMLPVPDDEILTLGTDPETGTPYLVQPEAWRN
Sequences:
>Translated_592_residues MKHNKYILALAFASMLTLGSCGDDFLGKEPQGVLTPEALANAQGVELLVTSAYAGLASPVEGYDPYQASPFNWVWGGIYG GDANKGSDPNDQSTVNEIELYNTLSTNGYIKQKWVWVYQMSKRVNLALQVLEKAEDMKEEIRQMRKGELKFLRALAYFEG MRVFGVYLPYIDETNQENDPKVHNDKDIYSLVVADVDDAIANLSDDPKVVGEVGRANKSAAKALKAKILMWHGDLAEAQP ILADVLTNGVTSKGMAYGLEDDLDNNFNALTENGKESVFAVQYSNAAENMGGAPFCLAYPHNTGPGGCCGFYQPSFELVN SFQVDANGLPYLNGEYRTKKSVSVRNSDSSQDAVLAVNDNNIAVDPRLDFAVGRFGIPYKDWGFPENGWVRDATNGGIFM PKKHVYSKAEDAAGMKALYGGWAPGSAMNLQYLSVRDLTLLYAECLANAGNLKGAMEQVNKIRRRAALDVNIVKLDDGTP AANYKIAEYPSSHAAFSNKDVCIKAIRMERKLELAMEGERWFDLSRWGGDVMASELKAYVDYEKQYISKFAGASYLPANK TMLPVPDDEILTLGTDPETGTPYLVQPEAWRN >Mature_592_residues MKHNKYILALAFASMLTLGSCGDDFLGKEPQGVLTPEALANAQGVELLVTSAYAGLASPVEGYDPYQASPFNWVWGGIYG GDANKGSDPNDQSTVNEIELYNTLSTNGYIKQKWVWVYQMSKRVNLALQVLEKAEDMKEEIRQMRKGELKFLRALAYFEG MRVFGVYLPYIDETNQENDPKVHNDKDIYSLVVADVDDAIANLSDDPKVVGEVGRANKSAAKALKAKILMWHGDLAEAQP ILADVLTNGVTSKGMAYGLEDDLDNNFNALTENGKESVFAVQYSNAAENMGGAPFCLAYPHNTGPGGCCGFYQPSFELVN SFQVDANGLPYLNGEYRTKKSVSVRNSDSSQDAVLAVNDNNIAVDPRLDFAVGRFGIPYKDWGFPENGWVRDATNGGIFM PKKHVYSKAEDAAGMKALYGGWAPGSAMNLQYLSVRDLTLLYAECLANAGNLKGAMEQVNKIRRRAALDVNIVKLDDGTP AANYKIAEYPSSHAAFSNKDVCIKAIRMERKLELAMEGERWFDLSRWGGDVMASELKAYVDYEKQYISKFAGASYLPANK TMLPVPDDEILTLGTDPETGTPYLVQPEAWRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65129; Mature: 65129
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNKYILALAFASMLTLGSCGDDFLGKEPQGVLTPEALANAQGVELLVTSAYAGLASPV CCCCCEEHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHCCCCCCEEEEEHHHHCCCCCC EGYDPYQASPFNWVWGGIYGGDANKGSDPNDQSTVNEIELYNTLSTNGYIKQKWVWVYQM CCCCCCCCCCCCEEECCEECCCCCCCCCCCCCHHHHHEEEEEEECCCCEEEEEEEEEEEH SKRVNLALQVLEKAEDMKEEIRQMRKGELKFLRALAYFEGMRVFGVYLPYIDETNQENDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC KVHNDKDIYSLVVADVDDAIANLSDDPKVVGEVGRANKSAAKALKAKILMWHGDLAEAQP CCCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHEEEEEECCHHHHHH ILADVLTNGVTSKGMAYGLEDDLDNNFNALTENGKESVFAVQYSNAAENMGGAPFCLAYP HHHHHHHCCCCCCCCEECCCCCCCCCCHHHCCCCCCCEEEEEECCHHHHCCCCCEEEECC HNTGPGGCCGFYQPSFELVNSFQVDANGLPYLNGEYRTKKSVSVRNSDSSQDAVLAVNDN CCCCCCCEECCCCCHHHHHHCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCC NIAVDPRLDFAVGRFGIPYKDWGFPENGWVRDATNGGIFMPKKHVYSKAEDAAGMKALYG CEEECCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHCCHHHHHC GWAPGSAMNLQYLSVRDLTLLYAECLANAGNLKGAMEQVNKIRRRAALDVNIVKLDDGTP CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCC AANYKIAEYPSSHAAFSNKDVCIKAIRMERKLELAMEGERWFDLSRWGGDVMASELKAYV CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEHHHCCCHHHHHHHHHHH DYEKQYISKFAGASYLPANKTMLPVPDDEILTLGTDPETGTPYLVQPEAWRN HHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCEEECCHHCCC >Mature Secondary Structure MKHNKYILALAFASMLTLGSCGDDFLGKEPQGVLTPEALANAQGVELLVTSAYAGLASPV CCCCCEEHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHCCCCCCEEEEEHHHHCCCCCC EGYDPYQASPFNWVWGGIYGGDANKGSDPNDQSTVNEIELYNTLSTNGYIKQKWVWVYQM CCCCCCCCCCCCEEECCEECCCCCCCCCCCCCHHHHHEEEEEEECCCCEEEEEEEEEEEH SKRVNLALQVLEKAEDMKEEIRQMRKGELKFLRALAYFEGMRVFGVYLPYIDETNQENDP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCC KVHNDKDIYSLVVADVDDAIANLSDDPKVVGEVGRANKSAAKALKAKILMWHGDLAEAQP CCCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHEEEEEECCHHHHHH ILADVLTNGVTSKGMAYGLEDDLDNNFNALTENGKESVFAVQYSNAAENMGGAPFCLAYP HHHHHHHCCCCCCCCEECCCCCCCCCCHHHCCCCCCCEEEEEECCHHHHCCCCCEEEECC HNTGPGGCCGFYQPSFELVNSFQVDANGLPYLNGEYRTKKSVSVRNSDSSQDAVLAVNDN CCCCCCCEECCCCCHHHHHHCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCC NIAVDPRLDFAVGRFGIPYKDWGFPENGWVRDATNGGIFMPKKHVYSKAEDAAGMKALYG CEEECCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHCCHHHHHC GWAPGSAMNLQYLSVRDLTLLYAECLANAGNLKGAMEQVNKIRRRAALDVNIVKLDDGTP CCCCCCCCEEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCEEEEEEECCCCC AANYKIAEYPSSHAAFSNKDVCIKAIRMERKLELAMEGERWFDLSRWGGDVMASELKAYV CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCEEEHHHCCCHHHHHHHHHHH DYEKQYISKFAGASYLPANKTMLPVPDDEILTLGTDPETGTPYLVQPEAWRN HHHHHHHHHHCCCCCCCCCCEEECCCCCCEEEECCCCCCCCCEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA