| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008142
Identifier: 150008142
GI number: 150008142
Start: 1760665
End: 1763418
Strand: Reverse
Name: 150008142
Synonym: BDI_1508
Alternate gene names: NA
Gene position: 1763418-1760665 (Counterclockwise)
Preceding gene: 150008143
Following gene: 150008141
Centisome position: 36.65
GC content: 55.88
Gene sequence:
>2754_bases ATGAGAAAGAGCCTATATATCGGTATGGTAATGTGCCTGCTGTCCGGTTGGACGGCGAGGGCGCAGCGGACGGTCGATCT GGATTTCCGGCAAGTAACCTTAAATGTCGTGTTCGACGCTATCGAGCGGCAGACCGGACAGCCCGTCTACCGGCAACCCT TGGAGACGGACTCCATGGTCGTTAGCGTACACAGTGAGAAGGAAGAGCCCTTGGTGGCGTTGCGGCGTGCGTTGGAGGGA ACTCCCTTCCAAGTATCCTCGTATGGCGGCGCCTTCTTTGTGTTGAGAGATAACACCTTGATGACCTCCCTGCCCGAGAA CTTCTTCCTGCGGGAGAAGCGGAGAGAGGGCGATGGCGACGAGGAAGGCTCCGGTATCTCCCTGATGGCGGGCCGGAAGC AGCAGAAGGCTACCTCGGAGAACAAGGTCTACGAGATCGGCGACGCCTCGGGCAAGGCGGCGGACCGGGTCACGGTGACC GGCAATATCAGCGATTTCAAGACCGGCGAGCCGATGGTGGGCGTGGCCGTGTTCGTGAAGGACCCGATGATCGGGGCTAC TACCGACGCTTACGGCTATTATACGCTGCGCCTCCCTCCCGGACGACACGAGCTGTACATACAAGGCATGGGCATGAAGG ACACCCGGCGGCAGATCATGCTCCATTCCGACGGCAAGCTGGATATCGAGCTGGAGGAACAGGTCTACACCTTGAAGGAG GTCACGATCTCCTCCGAGAAGATCGCCAACGTGCGGAATACGACGATGGGCGTGGAACGCCTGAAGGTGAAGGATATAAA GAATATCCCGATGGCGTTCGGCGAGGTGGATATCATGAAGGTAGTCATGTCGCTCCCCGGCGTGAAGGCGGTGGGCGAGG CCTCTAGCGGCTTTAACGTGAGGGGCGGGGCGACGGACCAGAACTTAATCCTCTTCAACGACGGGACGGTCTATAACCCG ACCCACCTGTTCGGCTTCTTCTCCGTCTTCAACCCCGACGTGGTGAAGGACATGGAGCTGTACAAGAGCAGCATCCCCGC CAAGTATGGCGGACGTATCTCCTCCGTGCTCGACATCAACAGCCGGGAGGGTAACAAGAAGGAGTTCAAGGGATCGGCGA GCATCGGCTTGCTGACCAGCCGCCTTACCTTGGAGGGGCCTCTCTTCTCCGAGAAGACCTCCTTTATCGTGGGCGGACGT ACCACTTACTCGGACTGGATCTTGAAGAAACTCCCCGAGAAGAGCGGCTATAAGGATGGCAACGCCGGGTTCTACGACCT GAACGCCACGATCAACCATAAATTCGACGAGCGGAACAACCTCTATCTGAATGGCTACTACAGCCACGACCGTTTCCGCT TTAACGTGGATGAGCGATATGCCTACGAGAACGCCAACGCCTCGGTGAAATGGAGGCATATCTTCTCGGATCGTTTCACG GGGGTCCTCACCGCCGGCTACGACCATTATGGCTACAATACCCGTAATACGGATAACCCGGTGAACGCTTATTCCCTCGC TTTCCGTATCGACCAGATGTACGGGAAGATGGACTTCACGCATTACCTGAGCGATAAGCATACGCTGGATTTCGGCGCCA GCTCGTTGTTCTACGGCTTGGAGCCGGGGAAATACCTTCCCTATGGTGGGGAGTCGTTGGTGAAGGAGGACCGGATGGAG AAGGAGAAAGCGGTGGAGTCCGCTATCTATGTGGGCGATCGTTGGGATATCACCTCCCAACTCTCCTTGAACGTGGGAGT CCGTTATTCCATATTTAACGTATTGGGGCCCCGTACCTATAATCTCTATGCCGACGACCAGCTGCCTTCCTTGGCTACCG TGACGGGCACGGTGGATAAGACCGGGGCGTTCAAGACCTACCACGGGCCCGAGTTCCGCATATCCGCCCGCTACGCCTTT ACCGAGGACTTCTCCGTGAAGGCCGGCTTTAATACGATGCGGCAGAATATCCATAAGCTATCCAACACGACCATCATGTC GCCCACGGATACGTGGAAGTTGAGCGACGCTAACATCAAGCCGCAGACGGGTATGCAAGTGGCCGCCGGGCTATACCGGA ATTTCTTGAGCAATACAATCGAGGTCTCCTTGGAGGGATATTACAAGACGATGAAGGATTACCTGGATTACCGGAACGGC GCCGAGCTGCTGATGAACCACCACATCGAGACGGACGTGCTGAGGACCGAGGGGCGTGCCTATGGCGTGGAGCTGATGGT GAAGAAAACGCAAGGGAAGTTGAACGGCTGGGTAAGCTATACCTACTCTCGCACGCAACTGCGGCAGAACGACCCGATGA TCGTGAATCCCGTGAACAAGGGGGATTGGTACGCCGCCGACTTCGATAAGCCGCACGACCTGAAGTTCGTGGGCAACTAT AAGTTCACGCATCGTTTCAGCTTCTCGCTGAATTGCGACTATAGCACGGGACGGCCGATCACCTTGCCGGTCTCCAAATA TCATTACGGGGGCGGTGAGTTTGTCTACTATTCGGACCGTAATCAATACCGCATCCCGGACTTTTTCCGGATGGACGCCT CGTTCAACATCGAGCCGAGCCACCACCTGACGTTGCTCACGCATAGCACGATCTCTTTCGGGGTCTATAACCTGACGGGG CGAAAGAACGCCTACTCGGTGTATTATATATCGGAGAACGGGAAATTAAAGGGATATAAGATGGCGATATTCGGGGTGCC TATCCCGTTTGTCTCTTATAATATTAAATTTTAG
Upstream 100 bases:
>100_bases TGGCCCGGTATATCAAGCGGCGAAAGCTGGATTTCAAGCACGCTCCCGAGGAAGCCATCGTAGCCGTGGTGAGACAGTAT GAACAGTTAAACGAGATCCC
Downstream 100 bases:
>100_bases GGGGGAGTTGAGATGAGGAAAGAAGCGAAGATAAAAGATTCTATAAAAGGCTTTCATTGGTGGCTGGGGGCTTTGCTGTT GTTATTGTCCGCCTGTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NB-Dependent Receptor; Outer Membrane Protein; Nb-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; NB Dependent Outer Membrane Protein; Ferric Aerobactin Receptor; NB-Dependent Receptor Domain-Containing Protein; NB Family Protein; Nb Family Protein; NB-Dependent Receptor Domain Protein; NB Dependent Receptor Domain Protein; NB-Dependent Outer Membrane Receptor; NB Dependent Receptor Domain-Containing Protein
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MRKSLYIGMVMCLLSGWTARAQRTVDLDFRQVTLNVVFDAIERQTGQPVYRQPLETDSMVVSVHSEKEEPLVALRRALEG TPFQVSSYGGAFFVLRDNTLMTSLPENFFLREKRREGDGDEEGSGISLMAGRKQQKATSENKVYEIGDASGKAADRVTVT GNISDFKTGEPMVGVAVFVKDPMIGATTDAYGYYTLRLPPGRHELYIQGMGMKDTRRQIMLHSDGKLDIELEEQVYTLKE VTISSEKIANVRNTTMGVERLKVKDIKNIPMAFGEVDIMKVVMSLPGVKAVGEASSGFNVRGGATDQNLILFNDGTVYNP THLFGFFSVFNPDVVKDMELYKSSIPAKYGGRISSVLDINSREGNKKEFKGSASIGLLTSRLTLEGPLFSEKTSFIVGGR TTYSDWILKKLPEKSGYKDGNAGFYDLNATINHKFDERNNLYLNGYYSHDRFRFNVDERYAYENANASVKWRHIFSDRFT GVLTAGYDHYGYNTRNTDNPVNAYSLAFRIDQMYGKMDFTHYLSDKHTLDFGASSLFYGLEPGKYLPYGGESLVKEDRME KEKAVESAIYVGDRWDITSQLSLNVGVRYSIFNVLGPRTYNLYADDQLPSLATVTGTVDKTGAFKTYHGPEFRISARYAF TEDFSVKAGFNTMRQNIHKLSNTTIMSPTDTWKLSDANIKPQTGMQVAAGLYRNFLSNTIEVSLEGYYKTMKDYLDYRNG AELLMNHHIETDVLRTEGRAYGVELMVKKTQGKLNGWVSYTYSRTQLRQNDPMIVNPVNKGDWYAADFDKPHDLKFVGNY KFTHRFSFSLNCDYSTGRPITLPVSKYHYGGGEFVYYSDRNQYRIPDFFRMDASFNIEPSHHLTLLTHSTISFGVYNLTG RKNAYSVYYISENGKLKGYKMAIFGVPIPFVSYNIKF
Sequences:
>Translated_917_residues MRKSLYIGMVMCLLSGWTARAQRTVDLDFRQVTLNVVFDAIERQTGQPVYRQPLETDSMVVSVHSEKEEPLVALRRALEG TPFQVSSYGGAFFVLRDNTLMTSLPENFFLREKRREGDGDEEGSGISLMAGRKQQKATSENKVYEIGDASGKAADRVTVT GNISDFKTGEPMVGVAVFVKDPMIGATTDAYGYYTLRLPPGRHELYIQGMGMKDTRRQIMLHSDGKLDIELEEQVYTLKE VTISSEKIANVRNTTMGVERLKVKDIKNIPMAFGEVDIMKVVMSLPGVKAVGEASSGFNVRGGATDQNLILFNDGTVYNP THLFGFFSVFNPDVVKDMELYKSSIPAKYGGRISSVLDINSREGNKKEFKGSASIGLLTSRLTLEGPLFSEKTSFIVGGR TTYSDWILKKLPEKSGYKDGNAGFYDLNATINHKFDERNNLYLNGYYSHDRFRFNVDERYAYENANASVKWRHIFSDRFT GVLTAGYDHYGYNTRNTDNPVNAYSLAFRIDQMYGKMDFTHYLSDKHTLDFGASSLFYGLEPGKYLPYGGESLVKEDRME KEKAVESAIYVGDRWDITSQLSLNVGVRYSIFNVLGPRTYNLYADDQLPSLATVTGTVDKTGAFKTYHGPEFRISARYAF TEDFSVKAGFNTMRQNIHKLSNTTIMSPTDTWKLSDANIKPQTGMQVAAGLYRNFLSNTIEVSLEGYYKTMKDYLDYRNG AELLMNHHIETDVLRTEGRAYGVELMVKKTQGKLNGWVSYTYSRTQLRQNDPMIVNPVNKGDWYAADFDKPHDLKFVGNY KFTHRFSFSLNCDYSTGRPITLPVSKYHYGGGEFVYYSDRNQYRIPDFFRMDASFNIEPSHHLTLLTHSTISFGVYNLTG RKNAYSVYYISENGKLKGYKMAIFGVPIPFVSYNIKF >Mature_917_residues MRKSLYIGMVMCLLSGWTARAQRTVDLDFRQVTLNVVFDAIERQTGQPVYRQPLETDSMVVSVHSEKEEPLVALRRALEG TPFQVSSYGGAFFVLRDNTLMTSLPENFFLREKRREGDGDEEGSGISLMAGRKQQKATSENKVYEIGDASGKAADRVTVT GNISDFKTGEPMVGVAVFVKDPMIGATTDAYGYYTLRLPPGRHELYIQGMGMKDTRRQIMLHSDGKLDIELEEQVYTLKE VTISSEKIANVRNTTMGVERLKVKDIKNIPMAFGEVDIMKVVMSLPGVKAVGEASSGFNVRGGATDQNLILFNDGTVYNP THLFGFFSVFNPDVVKDMELYKSSIPAKYGGRISSVLDINSREGNKKEFKGSASIGLLTSRLTLEGPLFSEKTSFIVGGR TTYSDWILKKLPEKSGYKDGNAGFYDLNATINHKFDERNNLYLNGYYSHDRFRFNVDERYAYENANASVKWRHIFSDRFT GVLTAGYDHYGYNTRNTDNPVNAYSLAFRIDQMYGKMDFTHYLSDKHTLDFGASSLFYGLEPGKYLPYGGESLVKEDRME KEKAVESAIYVGDRWDITSQLSLNVGVRYSIFNVLGPRTYNLYADDQLPSLATVTGTVDKTGAFKTYHGPEFRISARYAF TEDFSVKAGFNTMRQNIHKLSNTTIMSPTDTWKLSDANIKPQTGMQVAAGLYRNFLSNTIEVSLEGYYKTMKDYLDYRNG AELLMNHHIETDVLRTEGRAYGVELMVKKTQGKLNGWVSYTYSRTQLRQNDPMIVNPVNKGDWYAADFDKPHDLKFVGNY KFTHRFSFSLNCDYSTGRPITLPVSKYHYGGGEFVYYSDRNQYRIPDFFRMDASFNIEPSHHLTLLTHSTISFGVYNLTG RKNAYSVYYISENGKLKGYKMAIFGVPIPFVSYNIKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103852; Mature: 103852
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLYIGMVMCLLSGWTARAQRTVDLDFRQVTLNVVFDAIERQTGQPVYRQPLETDSMV CCCCHHHHHHHHHHCCCCHHCCEEEECCHHEEEHHHHHHHHHHHCCCCHHHCCCCCCCEE VSVHSEKEEPLVALRRALEGTPFQVSSYGGAFFVLRDNTLMTSLPENFFLREKRREGDGD EEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCCHHHHHHHHCCCCCC EEGSGISLMAGRKQQKATSENKVYEIGDASGKAADRVTVTGNISDFKTGEPMVGVAVFVK CCCCCEEEEECCCHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEE DPMIGATTDAYGYYTLRLPPGRHELYIQGMGMKDTRRQIMLHSDGKLDIELEEQVYTLKE CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEHHHEEEEHH VTISSEKIANVRNTTMGVERLKVKDIKNIPMAFGEVDIMKVVMSLPGVKAVGEASSGFNV EEECHHHHHHHHHHHCCHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCEE RGGATDQNLILFNDGTVYNPTHLFGFFSVFNPDVVKDMELYKSSIPAKYGGRISSVLDIN ECCCCCCEEEEECCCCEECCHHHEEEHHHCCCCHHHHHHHHHHCCCHHHCCCEEEEEEEC SREGNKKEFKGSASIGLLTSRLTLEGPLFSEKTSFIVGGRTTYSDWILKKLPEKSGYKDG CCCCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHCCHHCCCCCC NAGFYDLNATINHKFDERNNLYLNGYYSHDRFRFNVDERYAYENANASVKWRHIFSDRFT CCCEEEECEEEECCCCCCCCEEEEEEECCCEEEEECCHHEEECCCCCEEEEEEECCCCCC GVLTAGYDHYGYNTRNTDNPVNAYSLAFRIDQMYGKMDFTHYLSDKHTLDFGASSLFYGL EEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHCCCCCEECCCCCCEEEEC EPGKYLPYGGESLVKEDRMEKEKAVESAIYVGDRWDITSQLSLNVGVRYSIFNVLGPRTY CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCEEEEEEHHCCCEEE NLYADDQLPSLATVTGTVDKTGAFKTYHGPEFRISARYAFTEDFSVKAGFNTMRQNIHKL EEEECCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHH SNTTIMSPTDTWKLSDANIKPQTGMQVAAGLYRNFLSNTIEVSLEGYYKTMKDYLDYRNG CCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCC AELLMNHHIETDVLRTEGRAYGVELMVKKTQGKLNGWVSYTYSRTQLRQNDPMIVNPVNK HHHHHHCCCCHHHEECCCCEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCCEEEECCCC GDWYAADFDKPHDLKFVGNYKFTHRFSFSLNCDYSTGRPITLPVSKYHYGGGEFVYYSDR CCEEEECCCCCCCEEEEECEEEEEEEEEEEEECCCCCCEEEEEHHHEECCCCEEEEECCC NQYRIPDFFRMDASFNIEPSHHLTLLTHSTISFGVYNLTGRKNAYSVYYISENGKLKGYK CCEECCCEEEECCEECCCCCCEEEEEEECEEEEEEEEECCCCCEEEEEEECCCCCEEEEE MAIFGVPIPFVSYNIKF EEEEECCCCEEEEEEEC >Mature Secondary Structure MRKSLYIGMVMCLLSGWTARAQRTVDLDFRQVTLNVVFDAIERQTGQPVYRQPLETDSMV CCCCHHHHHHHHHHCCCCHHCCEEEECCHHEEEHHHHHHHHHHHCCCCHHHCCCCCCCEE VSVHSEKEEPLVALRRALEGTPFQVSSYGGAFFVLRDNTLMTSLPENFFLREKRREGDGD EEEECCCCCHHHHHHHHHCCCCEEEECCCCEEEEEECCEEEECCCCHHHHHHHHCCCCCC EEGSGISLMAGRKQQKATSENKVYEIGDASGKAADRVTVTGNISDFKTGEPMVGVAVFVK CCCCCEEEEECCCHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEEE DPMIGATTDAYGYYTLRLPPGRHELYIQGMGMKDTRRQIMLHSDGKLDIELEEQVYTLKE CCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCEEEEEEHHHEEEEHH VTISSEKIANVRNTTMGVERLKVKDIKNIPMAFGEVDIMKVVMSLPGVKAVGEASSGFNV EEECHHHHHHHHHHHCCHHHEEECCCCCCCCCCCHHHHHHHHHHCCCCCEECCCCCCCEE RGGATDQNLILFNDGTVYNPTHLFGFFSVFNPDVVKDMELYKSSIPAKYGGRISSVLDIN ECCCCCCEEEEECCCCEECCHHHEEEHHHCCCCHHHHHHHHHHCCCHHHCCCEEEEEEEC SREGNKKEFKGSASIGLLTSRLTLEGPLFSEKTSFIVGGRTTYSDWILKKLPEKSGYKDG CCCCCHHHCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCHHHHHHHHCCHHCCCCCC NAGFYDLNATINHKFDERNNLYLNGYYSHDRFRFNVDERYAYENANASVKWRHIFSDRFT CCCEEEECEEEECCCCCCCCEEEEEEECCCEEEEECCHHEEECCCCCEEEEEEECCCCCC GVLTAGYDHYGYNTRNTDNPVNAYSLAFRIDQMYGKMDFTHYLSDKHTLDFGASSLFYGL EEEEECCCCCCCCCCCCCCCCCEEEEEEEEEHHHCCCCHHHHCCCCCEECCCCCCEEEEC EPGKYLPYGGESLVKEDRMEKEKAVESAIYVGDRWDITSQLSLNVGVRYSIFNVLGPRTY CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEEECCEEEEEEHHCCCEEE NLYADDQLPSLATVTGTVDKTGAFKTYHGPEFRISARYAFTEDFSVKAGFNTMRQNIHKL EEEECCCCCCEEEEEECCCCCCCEEECCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHH SNTTIMSPTDTWKLSDANIKPQTGMQVAAGLYRNFLSNTIEVSLEGYYKTMKDYLDYRNG CCCEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCCCC AELLMNHHIETDVLRTEGRAYGVELMVKKTQGKLNGWVSYTYSRTQLRQNDPMIVNPVNK HHHHHHCCCCHHHEECCCCEEEEEEEEEECCCCCCEEEEEEEEHHHHCCCCCEEEECCCC GDWYAADFDKPHDLKFVGNYKFTHRFSFSLNCDYSTGRPITLPVSKYHYGGGEFVYYSDR CCEEEECCCCCCCEEEEECEEEEEEEEEEEEECCCCCCEEEEEHHHEECCCCEEEEECCC NQYRIPDFFRMDASFNIEPSHHLTLLTHSTISFGVYNLTGRKNAYSVYYISENGKLKGYK CCEECCCEEEECCEECCCCCCEEEEEEECEEEEEEEEECCCCCEEEEEEECCCCCEEEEE MAIFGVPIPFVSYNIKF EEEEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA