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The map label for this gene is epsD [H]

Identifier: 150008046

GI number: 150008046

Start: 1636252

End: 1637409

Strand: Reverse

Name: epsD [H]

Synonym: BDI_1409

Alternate gene names: 150008046

Gene position: 1637409-1636252 (Counterclockwise)

Preceding gene: 150008047

Following gene: 150008045

Centisome position: 34.03

GC content: 32.3

Gene sequence:

>1158_bases
ATGAAAATCGTATACTTTGTTGATGGATTAAACAGAGGAGGCGTAGAGTCGGTTGTTTGTCATCTATCGTCAAGTTTCGC
CAAATTGAGGAATAAGATCTATATTATATGTTTGCACAAAGATATGAATGATCTGCACCTTGAAATACCTGAATATATCT
CTGTTTTTTACCTTCCTTTTGAAAGTAACAGGAATCATCATGTTAATTATATTCGTTATTTGCCGAATTTAGTGGATTTG
TTGAAAAAGATAAAACCGGATATTGTTCATGCGCACAATTCCTCATTTTCATATTTCTTTTTATCTATAGGTATATTGCT
ATCGAGAACTGTTCCGGTTAATATTAGAAGCATACATTTTAGTGGTTTTTTTCTGGAAAAAAGAACAATCGAAGATAAAA
TACGTTTTATCTTCGATTGGTGTGCATGTCGATTGTTAAAAACGATAATTATATCTGTTGGTCCTACGGTAAGTCGTGTT
GTTAAAAGATTATATACTTCTAATCAACATTTGACGATAGTAAATGGAATTGATACAAAAGAAAAATTTTGTAAACGTAA
TCTTACGAAATCGTGTATGGGGATTAGTGAAGATAAATATGTTGCTGTTTATGTTGCACGAATTTGTGAAGGAAAGAATC
ACGATACCCTAATCAAGGCGTGGGAAATAGTGACACAGTATCACCCTTCTGCCTTATTACTATTTATTGGAGATGGCCCA
CTTAAAGAACAATATCAATCTGTTGTTCATGAAAAATCATTAGATGATAAAATCACATTTACTGGTTCTATTCCCAATAT
TGTTGAATATCTGTCAATTGCAGATGTTGGAGTGTTTCCCTCAGAATCTGAAGGGCTACCATTGGTTCTTATGGAAATGA
TGGCTGTGGAACTACCTGTGGTTGCTTCTAAAATACCATCTTGCTGTGATCTAATAGAGGAGAATGTTAACGGTATTTTA
TATGAAACCTATGATTATAAAGATTTGGCTAACAAAATTCTGAGTGTTTTATGTGATAATGAGCTAAAGAAAAAACTTGG
AGAACAAGCTAAGTTGCTTGTTTGTAATCATTACTCCATTGAAAATATGATAAATCGGCATAATATTCTTTATCAGAAGT
TGCTATTAAAACAGAATTTTACAGATGCGTATAATTAA

Upstream 100 bases:

>100_bases
ACGGTGTTTTTTTATGCTTTGATATTATTAATTAAAGGGTATATTGATGTTGCATCATTGATATTCATTTATTTACATTA
TAAATCATTAGATTCAAAAT

Downstream 100 bases:

>100_bases
CAGATTTATTAGTACTGTGAAAGGTGAAGATTTTAAATTAGATTCAAGGGTTCCATTATCTTATGTTATCTTACTTTTCC
TGTCACGAGGACTATCCTTG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MKIVYFVDGLNRGGVESVVCHLSSSFAKLRNKIYIICLHKDMNDLHLEIPEYISVFYLPFESNRNHHVNYIRYLPNLVDL
LKKIKPDIVHAHNSSFSYFFLSIGILLSRTVPVNIRSIHFSGFFLEKRTIEDKIRFIFDWCACRLLKTIIISVGPTVSRV
VKRLYTSNQHLTIVNGIDTKEKFCKRNLTKSCMGISEDKYVAVYVARICEGKNHDTLIKAWEIVTQYHPSALLLFIGDGP
LKEQYQSVVHEKSLDDKITFTGSIPNIVEYLSIADVGVFPSESEGLPLVLMEMMAVELPVVASKIPSCCDLIEENVNGIL
YETYDYKDLANKILSVLCDNELKKKLGEQAKLLVCNHYSIENMINRHNILYQKLLLKQNFTDAYN

Sequences:

>Translated_385_residues
MKIVYFVDGLNRGGVESVVCHLSSSFAKLRNKIYIICLHKDMNDLHLEIPEYISVFYLPFESNRNHHVNYIRYLPNLVDL
LKKIKPDIVHAHNSSFSYFFLSIGILLSRTVPVNIRSIHFSGFFLEKRTIEDKIRFIFDWCACRLLKTIIISVGPTVSRV
VKRLYTSNQHLTIVNGIDTKEKFCKRNLTKSCMGISEDKYVAVYVARICEGKNHDTLIKAWEIVTQYHPSALLLFIGDGP
LKEQYQSVVHEKSLDDKITFTGSIPNIVEYLSIADVGVFPSESEGLPLVLMEMMAVELPVVASKIPSCCDLIEENVNGIL
YETYDYKDLANKILSVLCDNELKKKLGEQAKLLVCNHYSIENMINRHNILYQKLLLKQNFTDAYN
>Mature_385_residues
MKIVYFVDGLNRGGVESVVCHLSSSFAKLRNKIYIICLHKDMNDLHLEIPEYISVFYLPFESNRNHHVNYIRYLPNLVDL
LKKIKPDIVHAHNSSFSYFFLSIGILLSRTVPVNIRSIHFSGFFLEKRTIEDKIRFIFDWCACRLLKTIIISVGPTVSRV
VKRLYTSNQHLTIVNGIDTKEKFCKRNLTKSCMGISEDKYVAVYVARICEGKNHDTLIKAWEIVTQYHPSALLLFIGDGP
LKEQYQSVVHEKSLDDKITFTGSIPNIVEYLSIADVGVFPSESEGLPLVLMEMMAVELPVVASKIPSCCDLIEENVNGIL
YETYDYKDLANKILSVLCDNELKKKLGEQAKLLVCNHYSIENMINRHNILYQKLLLKQNFTDAYN

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 44168; Mature: 44168

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVYFVDGLNRGGVESVVCHLSSSFAKLRNKIYIICLHKDMNDLHLEIPEYISVFYLPF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEEEEE
ESNRNHHVNYIRYLPNLVDLLKKIKPDIVHAHNSSFSYFFLSIGILLSRTVPVNIRSIHF
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE
SGFFLEKRTIEDKIRFIFDWCACRLLKTIIISVGPTVSRVVKRLYTSNQHLTIVNGIDTK
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHH
EKFCKRNLTKSCMGISEDKYVAVYVARICEGKNHDTLIKAWEIVTQYHPSALLLFIGDGP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
LKEQYQSVVHEKSLDDKITFTGSIPNIVEYLSIADVGVFPSESEGLPLVLMEMMAVELPV
HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VASKIPSCCDLIEENVNGILYETYDYKDLANKILSVLCDNELKKKLGEQAKLLVCNHYSI
HHHHCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEECCCH
ENMINRHNILYQKLLLKQNFTDAYN
HHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIVYFVDGLNRGGVESVVCHLSSSFAKLRNKIYIICLHKDMNDLHLEIPEYISVFYLPF
CEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEEEEE
ESNRNHHVNYIRYLPNLVDLLKKIKPDIVHAHNSSFSYFFLSIGILLSRTVPVNIRSIHF
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEE
SGFFLEKRTIEDKIRFIFDWCACRLLKTIIISVGPTVSRVVKRLYTSNQHLTIVNGIDTK
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHH
EKFCKRNLTKSCMGISEDKYVAVYVARICEGKNHDTLIKAWEIVTQYHPSALLLFIGDGP
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCC
LKEQYQSVVHEKSLDDKITFTGSIPNIVEYLSIADVGVFPSESEGLPLVLMEMMAVELPV
HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
VASKIPSCCDLIEENVNGILYETYDYKDLANKILSVLCDNELKKKLGEQAKLLVCNHYSI
HHHHCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCHHHHHHCCCCCEEEEEECCCH
ENMINRHNILYQKLLLKQNFTDAYN
HHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]