| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008043
Identifier: 150008043
GI number: 150008043
Start: 1633510
End: 1634601
Strand: Reverse
Name: 150008043
Synonym: BDI_1406
Alternate gene names: NA
Gene position: 1634601-1633510 (Counterclockwise)
Preceding gene: 150008044
Following gene: 150008040
Centisome position: 33.97
GC content: 33.42
Gene sequence:
>1092_bases ATGAAATATATAACAATCATTGGTACGGTTGGAGTACCTGCTAATTATGGAGGTTTTGAAACCTTAGTCGAAAATGTGAT AGGTGAAAATGCTTCTAAGGATGGGAATTATACGGTATATTGTAGTAGTAAAAGTTATCCTAAGAGGCTTAGTTTGTATA AAGGTGCTTCGTTAAAGTATATTCCTTTAGATGCTAATGGCATTCAAAGTATCTTTTATGATATTTTGTCTTTGATTCAA GCTACACGGAGAAGTGATGTTGTTCTGATATTAGGTGTCTCTGGATGTTGCTTTTTACCCATTTATCGTTTGTTCTCAAA AAAGAAATTGATAATTAATATTGATGGATTGGAACACCGAAGAAATAAATGGGGAAAGTGGACACGGCGATTCTTGAGGT TCTCAGAAAAAATGGCTGTGAAATATGCAGATGTAGTGGTGGCCGATAATAAGGGAATTCAAGATTATGTATTAGAAGAG TATGGTAAACAGGCTGAGTTGATTGCTTATGGTGGTGATCATGTTTTGTGTGACGTTTCTGATATAGAAGATGAAGTATT AGAGCAATATGGTCTAAAAGATGTAGATTATTCTTTTTCGTTATGCAGAATAGAGCCGGAAAATAACGTACATATAACAT TGGAAGCTTTTAAACGGACTGGGAAAGAATTGTTTTTTATAGGAAATTGGGAAAGAAGTTCGTATGGAAAGATGCTAAAA GATAAATATGGTGATTGTGAAAATATCCATTTACTTTCCCCAATATATGATGTGAAGGTGTTGAATGTTCTTAGAAGCCA TTGTTGCTATTATATTCACGGACATAGTGCAGGTGGTACCAATCCGTCTTTGGTGGAAGCAATGTTTTTTAATAAACCGA TATTGGCTTATGATGTGATTTATAATAGAGAGACAACGGAAAATAAGGCGGATTATTTTTCTTCTGTAGAAGATCTTGTG AATTTATTGAAAATGCCTGATTCTTATTATGTTTTAAATGCAGAAAATATGATGGAAATAGCTCAAAGATGTTATCGATG GATAATGATAACAAAACAATATGAGCGTTTATATGGCGTATCTGCAAAATAA
Upstream 100 bases:
>100_bases TAAACTATATAATCGTATTAAGAAGCGGTTGAAAAAATTATTTTTTTAGTGTATAGTGGTTGATTTTGCTATGATAATGT GTGTATAATAAGTTGTTTAC
Downstream 100 bases:
>100_bases ATTATTATGCCGTTAATTGAAGATTTTGGCATGTTGATTTATACTGTCCTTCCAAATAGATATTCTCTCCTTTGCAATTC ATAAATGTATGATGGACTCT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Rhamnosyltransferase; Glycosyl Transferase; Glycosyltransferase RfaG; Glycosyl Transferase Group 1 Family Protein; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Glycosyltransferase Protein; Group 1 Glycosyl Transferase; Rhamnosyl Transferase; Glycosyl Transferase Family Protein; Rhamnosyl Transferase WchF; Glycosyl-(Rhamnosyl) Transferase; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Glycosyltransferase-Like Protein; Alpha-D-GlcNAc Alpha-1 2-L-Rhamnosyltransferase; Glycosyltransferase Family 4 Protein; Alpha-(1 2)-Rhamnosyltransferase; A-Glycosyltransferase; Rhamnosyltransferase RgpA; Glycosyl Transferase GT4 Family Protein; Polysaccharide Export Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK
Sequences:
>Translated_363_residues MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK >Mature_363_residues MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41656; Mature: 41656
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKY CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEE IPLDANGIQSIFYDILSLIQATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHR EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHH RNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEEYGKQAELIAYGGDHVLCDVS HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEHH DIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCEEEEEECCCCHHHHHHHH DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVI HHCCCCCCEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE YNRETTENKADYFSSVEDLVNLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGV ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC SAK CCC >Mature Secondary Structure MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKY CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEE IPLDANGIQSIFYDILSLIQATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHR EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHH RNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEEYGKQAELIAYGGDHVLCDVS HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEHH DIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCEEEEEECCCCHHHHHHHH DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVI HHCCCCCCEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE YNRETTENKADYFSSVEDLVNLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGV ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC SAK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA