| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150006256
Identifier: 150006256
GI number: 150006256
Start: 4654863
End: 4655705
Strand: Direct
Name: 150006256
Synonym: BVU_3767
Alternate gene names: NA
Gene position: 4654863-4655705 (Clockwise)
Preceding gene: 150006252
Following gene: 150006257
Centisome position: 90.15
GC content: 47.45
Gene sequence:
>843_bases ATGACAACAAAGATAGCAAATATTCTCCAATGCTATGCATTGGGGATGGAGATAAAGCAAATAAGCAGGAGTTTTGAGCT ATCCCGCAACACAGTGCGCAGATATGTGCGTCTGTTCCAAAAGTGTGGCATTCCGATAAAGGAGTTGGCATCAATGCCTT CTTCCCGCATCCAAGAAATGTTCTCCGAAGGGGTTAGCCGTAGTCAGATTCCATCACAACGCCAACTTAAGCTGGAGGCA CTTCCACCCGAGTACTCCGCCCGTCTTAGCCGCCGAGGGGTAACGGTCAAATCCCTGTACAAAGAGTATCACAAAACACG CCCTAATGGATACAAACATGCCAGTTTCGGTAATTATCTCATGCGTTACCGGATGGTGACTCATGTCGTGGGGCATATTG AGCATTATGCCGATGACCAAATATACATTGACTTTGCCAGTGACAAGTTTGAGGTCATTGACAATGAAAACGGTGAATGC CGTAGCGTTGAAATGTTTGTGTCCATACTCCCCTGTAGCCACTATACCTATTGTGAAGCGGTCTGGTCCCAGTCAAAACA AGATCTGATCAAGGCATGTGAAAACGCACTTCATTTTTACGGCGGTATTCCGATGGCAATCGTACCTGACAACCTCAAAG CAGCAGTAGCCCGCAGCAACCACAACGGTCCGGTAATCAACGAGGAGTTTGCGGCATTTTCCGAGCATTATGGATGTACC GTATACCCCGCACGGGTACGCCATCCCAAGGACAAGGTGTTGGTTGAAAATGCCGTGAAACTGCTTTACCGGCAGTATAT GCAGATGTCGAAGAGCTTGTGTTCAACTCTCTGGAATCTTTGA
Upstream 100 bases:
>100_bases TGAATGTCCCTAAAAATGCCCCTGCCAAACATTGTCCGACAGGGGTGTTTTTCGTAGATTTGATTCCCGTCTTGACCGGT GGGGTAAAACCATTTCTACT
Downstream 100 bases:
>100_bases ATGTGGCCATTTTCGAATCGCTCTCAGCCTTTAACGGGCGCAGGATGAACGGACGTTCCCTGTCCAGACGCGAACAGATT GAAGCCGAGTACCTCCGCCC
Product: putative transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MTTKIANILQCYALGMEIKQISRSFELSRNTVRRYVRLFQKCGIPIKELASMPSSRIQEMFSEGVSRSQIPSQRQLKLEA LPPEYSARLSRRGVTVKSLYKEYHKTRPNGYKHASFGNYLMRYRMVTHVVGHIEHYADDQIYIDFASDKFEVIDNENGEC RSVEMFVSILPCSHYTYCEAVWSQSKQDLIKACENALHFYGGIPMAIVPDNLKAAVARSNHNGPVINEEFAAFSEHYGCT VYPARVRHPKDKVLVENAVKLLYRQYMQMSKSLCSTLWNL
Sequences:
>Translated_280_residues MTTKIANILQCYALGMEIKQISRSFELSRNTVRRYVRLFQKCGIPIKELASMPSSRIQEMFSEGVSRSQIPSQRQLKLEA LPPEYSARLSRRGVTVKSLYKEYHKTRPNGYKHASFGNYLMRYRMVTHVVGHIEHYADDQIYIDFASDKFEVIDNENGEC RSVEMFVSILPCSHYTYCEAVWSQSKQDLIKACENALHFYGGIPMAIVPDNLKAAVARSNHNGPVINEEFAAFSEHYGCT VYPARVRHPKDKVLVENAVKLLYRQYMQMSKSLCSTLWNL >Mature_279_residues TTKIANILQCYALGMEIKQISRSFELSRNTVRRYVRLFQKCGIPIKELASMPSSRIQEMFSEGVSRSQIPSQRQLKLEAL PPEYSARLSRRGVTVKSLYKEYHKTRPNGYKHASFGNYLMRYRMVTHVVGHIEHYADDQIYIDFASDKFEVIDNENGECR SVEMFVSILPCSHYTYCEAVWSQSKQDLIKACENALHFYGGIPMAIVPDNLKAAVARSNHNGPVINEEFAAFSEHYGCTV YPARVRHPKDKVLVENAVKLLYRQYMQMSKSLCSTLWNL
Specific function: Unknown
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017895 - InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 32257; Mature: 32125
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKIANILQCYALGMEIKQISRSFELSRNTVRRYVRLFQKCGIPIKELASMPSSRIQEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH FSEGVSRSQIPSQRQLKLEALPPEYSARLSRRGVTVKSLYKEYHKTRPNGYKHASFGNYL HHCCCCHHCCCCHHCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH MRYRMVTHVVGHIEHYADDQIYIDFASDKFEVIDNENGECRSVEMFVSILPCSHYTYCEA HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHH VWSQSKQDLIKACENALHFYGGIPMAIVPDNLKAAVARSNHNGPVINEEFAAFSEHYGCT HHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCE VYPARVRHPKDKVLVENAVKLLYRQYMQMSKSLCSTLWNL EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTKIANILQCYALGMEIKQISRSFELSRNTVRRYVRLFQKCGIPIKELASMPSSRIQEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHH FSEGVSRSQIPSQRQLKLEALPPEYSARLSRRGVTVKSLYKEYHKTRPNGYKHASFGNYL HHCCCCHHCCCCHHCEEEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHH MRYRMVTHVVGHIEHYADDQIYIDFASDKFEVIDNENGECRSVEMFVSILPCSHYTYCEA HHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHCCCCHHHHHH VWSQSKQDLIKACENALHFYGGIPMAIVPDNLKAAVARSNHNGPVINEEFAAFSEHYGCT HHCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCE VYPARVRHPKDKVLVENAVKLLYRQYMQMSKSLCSTLWNL EEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8796346; 9163424 [H]