| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006243
Identifier: 150006243
GI number: 150006243
Start: 4639551
End: 4642493
Strand: Direct
Name: 150006243
Synonym: BVU_3754
Alternate gene names: NA
Gene position: 4639551-4642493 (Clockwise)
Preceding gene: 150006242
Following gene: 150006244
Centisome position: 89.86
GC content: 41.05
Gene sequence:
>2943_bases ATGAGTCAGGAAGTAAAGGATTTTCAGCGTGCTACGGCAGATCGCATTCTGCATATCTATAAAAATTTAGGTCATCGACG GGTATTGCTGGCCGACGAAGTGGGATTAGGCAAGACGTTCGTAGCCAAACAAGTCATCAACCTGGTTCGTGAATGGCACA AGCAGGAGAAAGATGACTTCTTTAAGGTGGTTTATATCTGTTCGAATGCCAACATAGCCGACCAGAACATTGAGAAATTA GGGGTTGAAAATCGGATGAGCATCAGCGAGAGCCGTCTGTCAATGCAGCATCTCTATATCAAATTGGCTGAGAAACGGAT TGCAGAACAGCATGAACAGGGAGAAATGCCTGAATCAATCATTCCGCTGACTCCTTCCACTTCCTTCCGTTTTTACAGTG CACAAGGAACGGCCAATGAACGTGCCTTGATGTATAATATTTTATGCGGACTGGATCAATTCAAAGATTATAAGGAAGTT ATCAGTGATTTTCTTAGCTGTAATGTAAAAAACTGGCAGGAGCTTACGAACATTTATAACGAAAAGATCAAAGGATGCGG AGATGATTATCTTTGTGAGATGCATAGTAAGTTACAGACGAGTTTGTCGGATACTATTACAAATCAATTGATTGAGTACG CACAAAATGGTTGCGATAATCGTCAGAGGGCAGAGATGATCAATAAGCTACGTCGTATTTTCGCAGAAATCAGTATTGAC ATGCTCGACCCTGACCTGGTTATCATGGATGAGTTTCAACGCTTCAATTCGTTGCTTGAACAAGGCGATGACGAGCAATC CATGCTGGCCAACAAATTCTTTGACAACGAGCGTTCCAATACGAAGATTCTGTTACTTTCCGCTACGCCCTACAAACCTT ATTCCACCCTTGAAGAGTTAAATACAAATGGGAATGACGAGCACTATCAGGACTTTATGAAAGTAATGGATTTTCTATAT GCCACAAAAGATAAAATGGACCGGTTCAAGTTGATATGGCACACATATTCTGCTGCACTCAAACGTACAAATGTGGTTGA TTTAACACCGCTTGTGGTAACCAAGAATGAAGCAGAAGAAGCACTGTATGGAGTGATGTGCCGTACGGAACGGTTTAACA GTGGCATTATAGACGATTCCCGTGTATGTGACGTACAGGTCGTGCCGGAAGATATCCTTTCTTTTGCAGAGGGGCAGTAT CTGATGGATTGTCTAAATCAAGAAAATACGAAAGTGCGCTTAGGTAATCTCCCCATGGAATACGTCAAATCTTCACCTTA TTTGTTGTCCTTTATGGATAAATACGAACTGAAGAAACGAATTGCTTCGGCATTACAACACTCAGACGTAAAAAGATATG GAAAAATGGACGCATTGCTTCTATCGAAGTATGCCATCAATAATTATCGTCCCATTCCTGCTGCTAATGGAAAATTAAAG TATCTCCACGACCTAGTATTTGGTACACATCACGAGAAGAAAACACAGTTGTTGCTTTGGGTTCCTGCCTCTAATCCATA CTATATTGAGAGTAACGAAGCTCGCAACTTCTCCAAGATTATTTTATTCTCTTCATGGGAGATGGTACCGAGAATGATTT CCATCATGATGTCATATTATTCGGAGTTATATACTTTGGGAGAGTTAAAGAAGGTAGAAGCAGAGATACGCTATACTTCT CAAAAGAAGAACCGTTATGGCGAGAATCGTTTAAGAGCCGACGGATTATTAGAGTATCCTTGCCAAACCCTATCCGGTCT TTTCTCTCCTACCACATTTTATGGAGAGAAACTTTCCTCAATCCGGAAAATCATAAAACAGAGAATTCAAGAAGAATTTG CACAGAATACTATCATAAGTAGTATTCCACAACAAGGGCGAAACAACGCCAAACTTATTCTTACTCTCATGAAAATACTG GATGGAAAGCCAGTAGAAGATTTGAACGACTTGTATGTGCCTTCAAATGCATTGGATGTGATGACAGATATTGCCATCGC TTCACCGGCTGTATGTGCTTATCGGCAATCCGGCAATGAAGAAGATGCCCAAATGGTGGCTAAAGCAATCGTCTCAGTAT TCAACAAACCTGAAAGTGCAGCTGTGATAGACCTGATGTATAACAAAAAGAACGATGATGATTATTACGAATCTGTTCTT GATTACTGTGTGGTAGGTAACCTGCAGGCTGTACTTGATGAATATGCCCACATGACACAAACAAAGATGTTGGGACATAC TGTTACGGAGGCTATTATTGGCACAAGCAATCTTAGCATAGATACAACCGATTCATTGGGAATGGAAGAAAAGAAACAAC TTATGCGTTGTCATTTTGCTATTCCATTCATTGACAAAACGGTCACTGACAAATCTGTCGCTCGTACCACGAATATTCGT AAGGCTTTCAATTCTCCTTTCCGTCCGTTCCTGCTTTCAACAACATCAATAGGTCAGGAAGGCCTTGATTTTCATTGGTA TGCCAGAAAGATTGTTCACTGGAATCTACCCTCAAATCCTGTAGATATAGAGCAACGGGAAGGTCGTATCAACCGATTTA AGTGTCTGGCTATTCGCAGAAATGTGGTAAAATTGTATGGCAGTGAAACTTATCATACTTGGGATGAACTGTTTTCTCTA GCTTATTCGAATTTGAAAGGCACACATTCGGATATTGTTCCTTATTGGTGCCTTCCTGTCGCAAATCTGACGGAAGAACA ACGGGCAAAATTGGAATACATTGAGCGTATTGTTCCGCTTTACCCGCTTAGCCGCGATCGATATAAGTACGAACGTCTTA TCAAGGTGCTTGCTTTGTATCGCATGACACTGGGGCAGCCACGCCAGGAAGAGCTGTTGAACCTTTTGAGAAATATGCAT CTTTCGGATAAACAGCTCAAAGAACTGACAATTGATCTGTGTCCATATAATAAAAGGAAATGA
Upstream 100 bases:
>100_bases TCCGGCAAATCGTAGAGAAAGCAGACGAGACAGTCATCCCAGACCATTTCATGGAGATGTACAACACATTTGAAAACGTT ATTAAACAAATAAAACACTT
Downstream 100 bases:
>100_bases TTATAAAAACAGTTTCTCTCGAAAGGCTCTATATTTAATCAGATAAAGTAGATAAAAGAACAGAAATCACCTTACTTCTC ATCTATAAATTACAGTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Helicase Domain Protein; DEAD/DEAH Box HelicaseHelicase C-Terminal; Helicase-Like; DEAD-Like Helicase; Helicase C-Terminal; Dead/Deah Box HeliCaseHelicase; Helicase; DEAD/DEAH Box Helicase; Helicase Family Protein; DEAD/DEAH Box HelicaseHelicase
Number of amino acids: Translated: 980; Mature: 979
Protein sequence:
>980_residues MSQEVKDFQRATADRILHIYKNLGHRRVLLADEVGLGKTFVAKQVINLVREWHKQEKDDFFKVVYICSNANIADQNIEKL GVENRMSISESRLSMQHLYIKLAEKRIAEQHEQGEMPESIIPLTPSTSFRFYSAQGTANERALMYNILCGLDQFKDYKEV ISDFLSCNVKNWQELTNIYNEKIKGCGDDYLCEMHSKLQTSLSDTITNQLIEYAQNGCDNRQRAEMINKLRRIFAEISID MLDPDLVIMDEFQRFNSLLEQGDDEQSMLANKFFDNERSNTKILLLSATPYKPYSTLEELNTNGNDEHYQDFMKVMDFLY ATKDKMDRFKLIWHTYSAALKRTNVVDLTPLVVTKNEAEEALYGVMCRTERFNSGIIDDSRVCDVQVVPEDILSFAEGQY LMDCLNQENTKVRLGNLPMEYVKSSPYLLSFMDKYELKKRIASALQHSDVKRYGKMDALLLSKYAINNYRPIPAANGKLK YLHDLVFGTHHEKKTQLLLWVPASNPYYIESNEARNFSKIILFSSWEMVPRMISIMMSYYSELYTLGELKKVEAEIRYTS QKKNRYGENRLRADGLLEYPCQTLSGLFSPTTFYGEKLSSIRKIIKQRIQEEFAQNTIISSIPQQGRNNAKLILTLMKIL DGKPVEDLNDLYVPSNALDVMTDIAIASPAVCAYRQSGNEEDAQMVAKAIVSVFNKPESAAVIDLMYNKKNDDDYYESVL DYCVVGNLQAVLDEYAHMTQTKMLGHTVTEAIIGTSNLSIDTTDSLGMEEKKQLMRCHFAIPFIDKTVTDKSVARTTNIR KAFNSPFRPFLLSTTSIGQEGLDFHWYARKIVHWNLPSNPVDIEQREGRINRFKCLAIRRNVVKLYGSETYHTWDELFSL AYSNLKGTHSDIVPYWCLPVANLTEEQRAKLEYIERIVPLYPLSRDRYKYERLIKVLALYRMTLGQPRQEELLNLLRNMH LSDKQLKELTIDLCPYNKRK
Sequences:
>Translated_980_residues MSQEVKDFQRATADRILHIYKNLGHRRVLLADEVGLGKTFVAKQVINLVREWHKQEKDDFFKVVYICSNANIADQNIEKL GVENRMSISESRLSMQHLYIKLAEKRIAEQHEQGEMPESIIPLTPSTSFRFYSAQGTANERALMYNILCGLDQFKDYKEV ISDFLSCNVKNWQELTNIYNEKIKGCGDDYLCEMHSKLQTSLSDTITNQLIEYAQNGCDNRQRAEMINKLRRIFAEISID MLDPDLVIMDEFQRFNSLLEQGDDEQSMLANKFFDNERSNTKILLLSATPYKPYSTLEELNTNGNDEHYQDFMKVMDFLY ATKDKMDRFKLIWHTYSAALKRTNVVDLTPLVVTKNEAEEALYGVMCRTERFNSGIIDDSRVCDVQVVPEDILSFAEGQY LMDCLNQENTKVRLGNLPMEYVKSSPYLLSFMDKYELKKRIASALQHSDVKRYGKMDALLLSKYAINNYRPIPAANGKLK YLHDLVFGTHHEKKTQLLLWVPASNPYYIESNEARNFSKIILFSSWEMVPRMISIMMSYYSELYTLGELKKVEAEIRYTS QKKNRYGENRLRADGLLEYPCQTLSGLFSPTTFYGEKLSSIRKIIKQRIQEEFAQNTIISSIPQQGRNNAKLILTLMKIL DGKPVEDLNDLYVPSNALDVMTDIAIASPAVCAYRQSGNEEDAQMVAKAIVSVFNKPESAAVIDLMYNKKNDDDYYESVL DYCVVGNLQAVLDEYAHMTQTKMLGHTVTEAIIGTSNLSIDTTDSLGMEEKKQLMRCHFAIPFIDKTVTDKSVARTTNIR KAFNSPFRPFLLSTTSIGQEGLDFHWYARKIVHWNLPSNPVDIEQREGRINRFKCLAIRRNVVKLYGSETYHTWDELFSL AYSNLKGTHSDIVPYWCLPVANLTEEQRAKLEYIERIVPLYPLSRDRYKYERLIKVLALYRMTLGQPRQEELLNLLRNMH LSDKQLKELTIDLCPYNKRK >Mature_979_residues SQEVKDFQRATADRILHIYKNLGHRRVLLADEVGLGKTFVAKQVINLVREWHKQEKDDFFKVVYICSNANIADQNIEKLG VENRMSISESRLSMQHLYIKLAEKRIAEQHEQGEMPESIIPLTPSTSFRFYSAQGTANERALMYNILCGLDQFKDYKEVI SDFLSCNVKNWQELTNIYNEKIKGCGDDYLCEMHSKLQTSLSDTITNQLIEYAQNGCDNRQRAEMINKLRRIFAEISIDM LDPDLVIMDEFQRFNSLLEQGDDEQSMLANKFFDNERSNTKILLLSATPYKPYSTLEELNTNGNDEHYQDFMKVMDFLYA TKDKMDRFKLIWHTYSAALKRTNVVDLTPLVVTKNEAEEALYGVMCRTERFNSGIIDDSRVCDVQVVPEDILSFAEGQYL MDCLNQENTKVRLGNLPMEYVKSSPYLLSFMDKYELKKRIASALQHSDVKRYGKMDALLLSKYAINNYRPIPAANGKLKY LHDLVFGTHHEKKTQLLLWVPASNPYYIESNEARNFSKIILFSSWEMVPRMISIMMSYYSELYTLGELKKVEAEIRYTSQ KKNRYGENRLRADGLLEYPCQTLSGLFSPTTFYGEKLSSIRKIIKQRIQEEFAQNTIISSIPQQGRNNAKLILTLMKILD GKPVEDLNDLYVPSNALDVMTDIAIASPAVCAYRQSGNEEDAQMVAKAIVSVFNKPESAAVIDLMYNKKNDDDYYESVLD YCVVGNLQAVLDEYAHMTQTKMLGHTVTEAIIGTSNLSIDTTDSLGMEEKKQLMRCHFAIPFIDKTVTDKSVARTTNIRK AFNSPFRPFLLSTTSIGQEGLDFHWYARKIVHWNLPSNPVDIEQREGRINRFKCLAIRRNVVKLYGSETYHTWDELFSLA YSNLKGTHSDIVPYWCLPVANLTEEQRAKLEYIERIVPLYPLSRDRYKYERLIKVLALYRMTLGQPRQEELLNLLRNMHL SDKQLKELTIDLCPYNKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 113429; Mature: 113298
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQEVKDFQRATADRILHIYKNLGHRRVLLADEVGLGKTFVAKQVINLVREWHKQEKDDF CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCE FKVVYICSNANIADQNIEKLGVENRMSISESRLSMQHLYIKLAEKRIAEQHEQGEMPESI EEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IPLTPSTSFRFYSAQGTANERALMYNILCGLDQFKDYKEVISDFLSCNVKNWQELTNIYN ECCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EKIKGCGDDYLCEMHSKLQTSLSDTITNQLIEYAQNGCDNRQRAEMINKLRRIFAEISID HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MLDPDLVIMDEFQRFNSLLEQGDDEQSMLANKFFDNERSNTKILLLSATPYKPYSTLEEL HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH NTNGNDEHYQDFMKVMDFLYATKDKMDRFKLIWHTYSAALKRTNVVDLTPLVVTKNEAEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCHHHH ALYGVMCRTERFNSGIIDDSRVCDVQVVPEDILSFAEGQYLMDCLNQENTKVRLGNLPME HHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCCCEEEECCCCHH YVKSSPYLLSFMDKYELKKRIASALQHSDVKRYGKMDALLLSKYAINNYRPIPAANGKLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHH YLHDLVFGTHHEKKTQLLLWVPASNPYYIESNEARNFSKIILFSSWEMVPRMISIMMSYY HHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH SELYTLGELKKVEAEIRYTSQKKNRYGENRLRADGLLEYPCQTLSGLFSPTTFYGEKLSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH IRKIIKQRIQEEFAQNTIISSIPQQGRNNAKLILTLMKILDGKPVEDLNDLYVPSNALDV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHH MTDIAIASPAVCAYRQSGNEEDAQMVAKAIVSVFNKPESAAVIDLMYNKKNDDDYYESVL HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH DYCVVGNLQAVLDEYAHMTQTKMLGHTVTEAIIGTSNLSIDTTDSLGMEEKKQLMRCHFA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHC IPFIDKTVTDKSVARTTNIRKAFNSPFRPFLLSTTSIGQEGLDFHWYARKIVHWNLPSNP CCHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCCCCHHHEEHEEEEECCCCCC VDIEQREGRINRFKCLAIRRNVVKLYGSETYHTWDELFSLAYSNLKGTHSDIVPYWCLPV CCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC ANLTEEQRAKLEYIERIVPLYPLSRDRYKYERLIKVLALYRMTLGQPRQEELLNLLRNMH CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC LSDKQLKELTIDLCPYNKRK CCHHHHHHHHHEECCCCCCC >Mature Secondary Structure SQEVKDFQRATADRILHIYKNLGHRRVLLADEVGLGKTFVAKQVINLVREWHKQEKDDF CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCE FKVVYICSNANIADQNIEKLGVENRMSISESRLSMQHLYIKLAEKRIAEQHEQGEMPESI EEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE IPLTPSTSFRFYSAQGTANERALMYNILCGLDQFKDYKEVISDFLSCNVKNWQELTNIYN ECCCCCCCEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH EKIKGCGDDYLCEMHSKLQTSLSDTITNQLIEYAQNGCDNRQRAEMINKLRRIFAEISID HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MLDPDLVIMDEFQRFNSLLEQGDDEQSMLANKFFDNERSNTKILLLSATPYKPYSTLEEL HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHH NTNGNDEHYQDFMKVMDFLYATKDKMDRFKLIWHTYSAALKRTNVVDLTPLVVTKNEAEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCHHHH ALYGVMCRTERFNSGIIDDSRVCDVQVVPEDILSFAEGQYLMDCLNQENTKVRLGNLPME HHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHCCHHHHHHHCCCCCEEEECCCCHH YVKSSPYLLSFMDKYELKKRIASALQHSDVKRYGKMDALLLSKYAINNYRPIPAANGKLK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHH YLHDLVFGTHHEKKTQLLLWVPASNPYYIESNEARNFSKIILFSSWEMVPRMISIMMSYY HHHHHHHCCCCCCCCEEEEEEECCCCEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHH SELYTLGELKKVEAEIRYTSQKKNRYGENRLRADGLLEYPCQTLSGLFSPTTFYGEKLSS HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHH IRKIIKQRIQEEFAQNTIISSIPQQGRNNAKLILTLMKILDGKPVEDLNDLYVPSNALDV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHH MTDIAIASPAVCAYRQSGNEEDAQMVAKAIVSVFNKPESAAVIDLMYNKKNDDDYYESVL HHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHH DYCVVGNLQAVLDEYAHMTQTKMLGHTVTEAIIGTSNLSIDTTDSLGMEEKKQLMRCHFA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHC IPFIDKTVTDKSVARTTNIRKAFNSPFRPFLLSTTSIGQEGLDFHWYARKIVHWNLPSNP CCHHCCCCCHHHHHHHHHHHHHHCCCCCHHEEEHHHCCCCCCCHHHEEHEEEEECCCCCC VDIEQREGRINRFKCLAIRRNVVKLYGSETYHTWDELFSLAYSNLKGTHSDIVPYWCLPV CCCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCC ANLTEEQRAKLEYIERIVPLYPLSRDRYKYERLIKVLALYRMTLGQPRQEELLNLLRNMH CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC LSDKQLKELTIDLCPYNKRK CCHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA