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The map label for this gene is hsdS [H]

Identifier: 150006167

GI number: 150006167

Start: 4550842

End: 4551522

Strand: Direct

Name: hsdS [H]

Synonym: BVU_3678

Alternate gene names: 150006167

Gene position: 4550842-4551522 (Clockwise)

Preceding gene: 150006165

Following gene: 150006168

Centisome position: 88.14

GC content: 33.77

Gene sequence:

>681_bases
ATGCGAGAAGAAGCACCAAGTAGAGCACAACGTGTTATAGATAACAATGATATTCTGTTTCAATGTGTGCGCCCCTATCA
GAAAAACAACTATATTCATAGGATTCTAAATACGAGTAATCAACAATGGGTTGCTTCTACTGGATATGCTCAAATTAGAA
CAACAGAATTGCCAAACTATATTTATCATCTATTGAATACAGACGAATTCAATAGAAAAGTAATGGTTCGTTGCACAGGT
TCAAGTTACCCTGCTATTAATAGTGAGGACTTAGCAACAATTCATCTTTATTATACACCCGACAAAAAAGAGCAACTTAA
AATATCTCGATTATTAGATTTACTTGACAAACGCATTGCTACCCAAAACAAAATCATTGAGAAACTGCAGTCCTTAATCA
AAGGAATTGCACAGCATTGCATTAAAGAATCAACAAGTGGAAACACATATGTAAAACTTGGTGATATTTGTCAAATTACA
ACAGGGAAACTTGATGCAAATGCACAGGTAGATAATGGGATTTATCCATTTTTTACTTGTGCAGAACAACCATTCAAAAT
TGATAGCTTCGCTTTTGATACAGAAGCTTTACTAATCTCTGGAAATGGTGCTAATTTGGGATATATCAATTATTATAAGG
GAAAGTTTAATGCTTATCAAAGGACTGTAAGCATCCGATAA

Upstream 100 bases:

>100_bases
AGCCACTATAAATCCAAAATCAGATCCGCTTCAGAACACTTTTATTTATATAGACTTGGAAGCCGTTGAAAAAGGTGAGT
TAAGAAAAATACAAGAAATA

Downstream 100 bases:

>100_bases
AGTACACATTGTAGACCTAAAAACTCTTCTATTACTTTGCGTTCAAAAACGTAGTTATGAAACGATCAATGAGTAAAGAA
GAGTTTTTAGCGCTATATCA

Product: type I restriction endonuclease S subunit

Products: NA

Alternate protein names: S.EcoDI; Type I restriction enzyme EcoDI specificity protein; S protein [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MREEAPSRAQRVIDNNDILFQCVRPYQKNNYIHRILNTSNQQWVASTGYAQIRTTELPNYIYHLLNTDEFNRKVMVRCTG
SSYPAINSEDLATIHLYYTPDKKEQLKISRLLDLLDKRIATQNKIIEKLQSLIKGIAQHCIKESTSGNTYVKLGDICQIT
TGKLDANAQVDNGIYPFFTCAEQPFKIDSFAFDTEALLISGNGANLGYINYYKGKFNAYQRTVSIR

Sequences:

>Translated_226_residues
MREEAPSRAQRVIDNNDILFQCVRPYQKNNYIHRILNTSNQQWVASTGYAQIRTTELPNYIYHLLNTDEFNRKVMVRCTG
SSYPAINSEDLATIHLYYTPDKKEQLKISRLLDLLDKRIATQNKIIEKLQSLIKGIAQHCIKESTSGNTYVKLGDICQIT
TGKLDANAQVDNGIYPFFTCAEQPFKIDSFAFDTEALLISGNGANLGYINYYKGKFNAYQRTVSIR
>Mature_226_residues
MREEAPSRAQRVIDNNDILFQCVRPYQKNNYIHRILNTSNQQWVASTGYAQIRTTELPNYIYHLLNTDEFNRKVMVRCTG
SSYPAINSEDLATIHLYYTPDKKEQLKISRLLDLLDKRIATQNKIIEKLQSLIKGIAQHCIKESTSGNTYVKLGDICQIT
TGKLDANAQVDNGIYPFFTCAEQPFKIDSFAFDTEALLISGNGANLGYINYYKGKFNAYQRTVSIR

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 25866; Mature: 25866

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEAPSRAQRVIDNNDILFQCVRPYQKNNYIHRILNTSNQQWVASTGYAQIRTTELPNY
CCCCCHHHHHHHHCCCCEEEEECCCHHCCCCEEEECCCCCCCEEEECCCEEEEEECCHHH
IYHLLNTDEFNRKVMVRCTGSSYPAINSEDLATIHLYYTPDKKEQLKISRLLDLLDKRIA
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
TQNKIIEKLQSLIKGIAQHCIKESTSGNTYVKLGDICQITTGKLDANAQVDNGIYPFFTC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCEECCCCCCEEEC
AEQPFKIDSFAFDTEALLISGNGANLGYINYYKGKFNAYQRTVSIR
CCCCCCCCCEEECCEEEEEECCCCCEEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MREEAPSRAQRVIDNNDILFQCVRPYQKNNYIHRILNTSNQQWVASTGYAQIRTTELPNY
CCCCCHHHHHHHHCCCCEEEEECCCHHCCCCEEEECCCCCCCEEEECCCEEEEEECCHHH
IYHLLNTDEFNRKVMVRCTGSSYPAINSEDLATIHLYYTPDKKEQLKISRLLDLLDKRIA
HHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
TQNKIIEKLQSLIKGIAQHCIKESTSGNTYVKLGDICQITTGKLDANAQVDNGIYPFFTC
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEECCCCCCCCEECCCCCCEEEC
AEQPFKIDSFAFDTEALLISGNGANLGYINYYKGKFNAYQRTVSIR
CCCCCCCCCEEECCEEEEEECCCCCEEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6304321 [H]