| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005987
Identifier: 150005987
GI number: 150005987
Start: 4337588
End: 4338433
Strand: Direct
Name: 150005987
Synonym: BVU_3485
Alternate gene names: NA
Gene position: 4337588-4338433 (Clockwise)
Preceding gene: 150005986
Following gene: 150005988
Centisome position: 84.01
GC content: 44.33
Gene sequence:
>846_bases ATGGAGGACAAGTTGATTTCCCGATATGATATTTTAGTGAACCGGTACAAGGAACTTGTATCTGAGAAGCTGAGCAGGAA AGATTTTATAGAATACAATGAAATTCTATTCTCGGCGCATAGCTGTGCTATAGAGGGGAACAGTTTTTCAGTGGACGAGA CCCGCACCTTGAAAGAAAAAGGGCTGGGCATGATCCCCAAAGGCAAGACCTTGCTGGAGGCATTTGAAATCCTGGATCAT TTCCAGGCTTATGAATATCTTCTGAAGAATTTGGACAGGCCGCTGACCGAGGAACTCCTGAAGGAAACCCACCGGCTGCT GACGGAACATACCCTCTCTTACAAGACCCAATACGATGAAATACCGTCCAACCCGGGAGAATATACAACAGTGGACATGT GTGCCGGTGATACGATATTTGGGGACCATGAGCAGCTGATAAAGCAGGTTCCCCGCCTGTTGCAAAGCACCCAGCAGGTC CTGGACTCCGGGAAGATCCATCCGATGATCATCGCGGCAAGATTTCATGGGTTTTATGAATATCTGCATCCCTTCCGGGA CGGAAACGGTCGTCTGGGACGTCTGATGTCCAATTTTATATTGCTCAAAAAAGAACAGCCGCTGCTGATAATCCCCGGTT CGCAAAGAGAGGAATATATCACCGCCTTAAAATATATCAAAAAAGAGCGTACAGATGAATTTCTGATAGATTTTTTCTTC CGGACATCCATAAAAAGGATGGAACAGGAAATAGAGGAAAAAAAGAATCTCACGGAGAATTTTATCAGGGGGATGGAATT TGTTAGAAATGTAAAATCATCCAATGATGACATTTCAGAAATCTAA
Upstream 100 bases:
>100_bases GCGGGGAAAGTAATGATATCACACTTTTATCAAGGAATTACATATAGAATGCAGGGTTATATTGGTCAGATTTAGTATCT TTGCAAAAAATGGTACTGAT
Downstream 100 bases:
>100_bases TATTACATTCTGACAGTCCGAACAGTACTTTGCAGGCGAACTTTTCAAAAGCCGGTAAAACGTTCTATTTCTCCATCCGG ACAGGAAGAGGCAAACTGGA
Product: huntingtin interacting protein E-like protein
Products: NA
Alternate protein names: Fic Family Protein; Fic Protein; Fic Family Protein xin-Antitoxin System; Fic-Domain-Containing Protein; Fic Protein Involved In; Filamentation Induced By Camp Protein Fic; Fic Family xin-Antitoxin System Toxin Component; Filamentation Induced By CAMP Protein Fic-Like Protein
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MEDKLISRYDILVNRYKELVSEKLSRKDFIEYNEILFSAHSCAIEGNSFSVDETRTLKEKGLGMIPKGKTLLEAFEILDH FQAYEYLLKNLDRPLTEELLKETHRLLTEHTLSYKTQYDEIPSNPGEYTTVDMCAGDTIFGDHEQLIKQVPRLLQSTQQV LDSGKIHPMIIAARFHGFYEYLHPFRDGNGRLGRLMSNFILLKKEQPLLIIPGSQREEYITALKYIKKERTDEFLIDFFF RTSIKRMEQEIEEKKNLTENFIRGMEFVRNVKSSNDDISEI
Sequences:
>Translated_281_residues MEDKLISRYDILVNRYKELVSEKLSRKDFIEYNEILFSAHSCAIEGNSFSVDETRTLKEKGLGMIPKGKTLLEAFEILDH FQAYEYLLKNLDRPLTEELLKETHRLLTEHTLSYKTQYDEIPSNPGEYTTVDMCAGDTIFGDHEQLIKQVPRLLQSTQQV LDSGKIHPMIIAARFHGFYEYLHPFRDGNGRLGRLMSNFILLKKEQPLLIIPGSQREEYITALKYIKKERTDEFLIDFFF RTSIKRMEQEIEEKKNLTENFIRGMEFVRNVKSSNDDISEI >Mature_281_residues MEDKLISRYDILVNRYKELVSEKLSRKDFIEYNEILFSAHSCAIEGNSFSVDETRTLKEKGLGMIPKGKTLLEAFEILDH FQAYEYLLKNLDRPLTEELLKETHRLLTEHTLSYKTQYDEIPSNPGEYTTVDMCAGDTIFGDHEQLIKQVPRLLQSTQQV LDSGKIHPMIIAARFHGFYEYLHPFRDGNGRLGRLMSNFILLKKEQPLLIIPGSQREEYITALKYIKKERTDEFLIDFFF RTSIKRMEQEIEEKKNLTENFIRGMEFVRNVKSSNDDISEI
Specific function: Unknown
COG id: COG3177
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI42794620, Length=184, Percent_Identity=29.8913043478261, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17544594, Length=193, Percent_Identity=28.4974093264249, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24582217, Length=192, Percent_Identity=32.2916666666667, Blast_Score=75, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32991; Mature: 32991
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKLISRYDILVNRYKELVSEKLSRKDFIEYNEILFSAHSCAIEGNSFSVDETRTLKEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHC GLGMIPKGKTLLEAFEILDHFQAYEYLLKNLDRPLTEELLKETHRLLTEHTLSYKTQYDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IPSNPGEYTTVDMCAGDTIFGDHEQLIKQVPRLLQSTQQVLDSGKIHPMIIAARFHGFYE CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLHPFRDGNGRLGRLMSNFILLKKEQPLLIIPGSQREEYITALKYIKKERTDEFLIDFFF HHHHHCCCCCHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHH RTSIKRMEQEIEEKKNLTENFIRGMEFVRNVKSSNDDISEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC >Mature Secondary Structure MEDKLISRYDILVNRYKELVSEKLSRKDFIEYNEILFSAHSCAIEGNSFSVDETRTLKEK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHC GLGMIPKGKTLLEAFEILDHFQAYEYLLKNLDRPLTEELLKETHRLLTEHTLSYKTQYDE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC IPSNPGEYTTVDMCAGDTIFGDHEQLIKQVPRLLQSTQQVLDSGKIHPMIIAARFHGFYE CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLHPFRDGNGRLGRLMSNFILLKKEQPLLIIPGSQREEYITALKYIKKERTDEFLIDFFF HHHHHCCCCCHHHHHHHHHHHEECCCCEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHH RTSIKRMEQEIEEKKNLTENFIRGMEFVRNVKSSNDDISEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA