| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is dcp [H]
Identifier: 150005941
GI number: 150005941
Start: 4285114
End: 4287219
Strand: Direct
Name: dcp [H]
Synonym: BVU_3439
Alternate gene names: 150005941
Gene position: 4285114-4287219 (Clockwise)
Preceding gene: 150005937
Following gene: 150005942
Centisome position: 82.99
GC content: 44.92
Gene sequence:
>2106_bases ATGAAACACATTCTTTTGGCAGCCTGTGCGGTTGCCATATTAAGCGGTTGCGGTTCGCAAGGGAAACAGGCAGCCCCTAC CGAAAATCCATTCCTTTCAGAGTACACAACTCCCTTCCAGGTTCCTCCTTTCGACCAAATCAAGATGGAACATTACAAAC CCGCCTTTTTGCAGGGCATGGAAGAACAACAGAAAGAGATTGACGCTATAGTAAACAACCCCGAACCCGCCACTTTCCAG AATACCATTGCAGCACTGGATCAAAGCGGAGCGTTACTTCGTAAAGTCAGCACCGTATTCTACGGACTGAAAAGCGCCAA TACCAATGATGAAATGGACGCACTGAGCCGTGAACTCTCTCCACTACAATCAAAACACAGCGATGACATCGCCTTAAATG AAAAACTTTTTGCACGTATTAAAGCTGTCTATGAAAATCCCGGCAATTTGGACAAAGAGCAAAAGAAGTTGTTGGAAGAA ACCTATAAAGATTTTGTACGTGGAGGTGCCAACCTGGATGCCGACAGTCAAAAAAAACTGCGTGAATTAAATAGTGAGAT TTCCATGTTACAGCTCACCTTCGGCCAAAATATGCAGAAGGAAACCAATGCTTTCCAATTGATCGTGGACAAAGAAGAAG ACTTAGCCGGATTACCCCAAAACCTGATTGCCAGTGCTGCCGAAACAGCTAAAGAAGCAGGCATGGAAGGCAAATGGATT TTCACCCTGCATAATCCCAGCGTCATGCCTTTCCTGCAATATGCCGATAACCGAGACCTGCGTGAAAAGATATTCAAAGG ATACATTAACAGAGGAAATAACGGAAATGAATACGACAACAAGGAAGTGGTACGCAAACTGCTCAAAGCCCGTCTGGAAA AAGCCAAGCTGATGGGATATGAAAACTATGCTTCCTTTGCACTGGAAGAACGTATGGCGAAAACACCGGATGCCGTATAT AAATTATTAGACCAGATTTGGACACCTACTCTGTCCAAAGCCAAAGAAGAACTGGCAGATATCAATGCCGAAATAAAGAA AGACGGAAAAACCTTCACAGCCGAAGGTTGGGACTGGCGTTATTATGCAGACCGAGCCAAGAAAGCCAAATTCGACTTGG ATGAAAATCAGGTACGTCCTTATCTGAAACTGGAAAACGTACGTGACGGTGTGTTCTATGTTGCCAACAAACTGTACGGT ATCACTTTCACCCAGCTGGACAATCTTCCCCTCCCTCATCCCGATGCACAGGCATTCGAATGTAAGGACAAAGACGGTTC TCATCTAGGTGTACTCTATATGGACTTCTTTCCGCGTGCCAGCAAGAAAGGTGGCGCATGGTGCGGAAGCTATCGTTCAC AGACCTACAAGGACGGCAAGAAAGTGGCTCCTGTAGTAACCGTGGTATGCAACTTTACCAAACCGGCAGCCGGACAACCC GCTTTGCTCAGTGCAGATGAAGCGAATACCTTGTTCCACGAATTCGGACACGCTTTACATAATCTTTTCAAAGATGTACA TTATTATGGTGTGGCTAGTGTTCCGCGTGATTTTGTAGAACTGCCGTCACAGATAGATGAGCATTGGGCTTTTGAACCGG AGGTATTGAATGTATATGCCAAACATTATCAGACAGGTGAAGTTATTCCTGCCGGACTGGTTGAAAAAATGGACAAGAGT GGCAAATACGGACAAGGCTTCGCTACGGCTGAATATTTAGCTGCTTCCCTGCTGGATATGGATTATCATGTATTAAAAGA AATTCCCGATGATATGGACGTTATGCAGTTCGAAGCAGAAACATTAGGTAAGCGCGGATTGCTGAAACAAATTCCGTCAC GCTATCGCACCACTTATTTCAACCACACCATGGGTGGTGGATATACTGCCGGTTACTATAGTTATATTTGGGCAGAAGTG CTGGATTGTGACGCATACGAGGCATACAAGGAAACAGGCGATATCTTTAATCAAGAAGTAGCAGGAAAGTTCCGCAAATA TATCCTCACTCCCGGCTGCATTGACGATGCGATGGACATGTATGTCAATTTCCGTGGCAAAGAACCCGGTATTGATCCCT TGTTAAAGAACAGAGGACTAAAATAA
Upstream 100 bases:
>100_bases ACAGACTATGAAAACAAACAAATAGTTCTACGCTTCAAACTTATTGGAATTTGCCTTATTTTACTATCTTTGCATTATCA CCTATATAAAACAAATTATT
Downstream 100 bases:
>100_bases CCCTCTAACCCTAAATAGAATTCCTCCCCCTGCAAAAGACAAATGATTGTGACTCTTGCAGTGGGAGGATTCTCATTTTG TAGTATGATTGCGGATAGTT
Product: peptidyl-dipeptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 701; Mature: 701
Protein sequence:
>701_residues MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGMEEQQKEIDAIVNNPEPATFQ NTIAALDQSGALLRKVSTVFYGLKSANTNDEMDALSRELSPLQSKHSDDIALNEKLFARIKAVYENPGNLDKEQKKLLEE TYKDFVRGGANLDADSQKKLRELNSEISMLQLTFGQNMQKETNAFQLIVDKEEDLAGLPQNLIASAAETAKEAGMEGKWI FTLHNPSVMPFLQYADNRDLREKIFKGYINRGNNGNEYDNKEVVRKLLKARLEKAKLMGYENYASFALEERMAKTPDAVY KLLDQIWTPTLSKAKEELADINAEIKKDGKTFTAEGWDWRYYADRAKKAKFDLDENQVRPYLKLENVRDGVFYVANKLYG ITFTQLDNLPLPHPDAQAFECKDKDGSHLGVLYMDFFPRASKKGGAWCGSYRSQTYKDGKKVAPVVTVVCNFTKPAAGQP ALLSADEANTLFHEFGHALHNLFKDVHYYGVASVPRDFVELPSQIDEHWAFEPEVLNVYAKHYQTGEVIPAGLVEKMDKS GKYGQGFATAEYLAASLLDMDYHVLKEIPDDMDVMQFEAETLGKRGLLKQIPSRYRTTYFNHTMGGGYTAGYYSYIWAEV LDCDAYEAYKETGDIFNQEVAGKFRKYILTPGCIDDAMDMYVNFRGKEPGIDPLLKNRGLK
Sequences:
>Translated_701_residues MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGMEEQQKEIDAIVNNPEPATFQ NTIAALDQSGALLRKVSTVFYGLKSANTNDEMDALSRELSPLQSKHSDDIALNEKLFARIKAVYENPGNLDKEQKKLLEE TYKDFVRGGANLDADSQKKLRELNSEISMLQLTFGQNMQKETNAFQLIVDKEEDLAGLPQNLIASAAETAKEAGMEGKWI FTLHNPSVMPFLQYADNRDLREKIFKGYINRGNNGNEYDNKEVVRKLLKARLEKAKLMGYENYASFALEERMAKTPDAVY KLLDQIWTPTLSKAKEELADINAEIKKDGKTFTAEGWDWRYYADRAKKAKFDLDENQVRPYLKLENVRDGVFYVANKLYG ITFTQLDNLPLPHPDAQAFECKDKDGSHLGVLYMDFFPRASKKGGAWCGSYRSQTYKDGKKVAPVVTVVCNFTKPAAGQP ALLSADEANTLFHEFGHALHNLFKDVHYYGVASVPRDFVELPSQIDEHWAFEPEVLNVYAKHYQTGEVIPAGLVEKMDKS GKYGQGFATAEYLAASLLDMDYHVLKEIPDDMDVMQFEAETLGKRGLLKQIPSRYRTTYFNHTMGGGYTAGYYSYIWAEV LDCDAYEAYKETGDIFNQEVAGKFRKYILTPGCIDDAMDMYVNFRGKEPGIDPLLKNRGLK >Mature_701_residues MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGMEEQQKEIDAIVNNPEPATFQ NTIAALDQSGALLRKVSTVFYGLKSANTNDEMDALSRELSPLQSKHSDDIALNEKLFARIKAVYENPGNLDKEQKKLLEE TYKDFVRGGANLDADSQKKLRELNSEISMLQLTFGQNMQKETNAFQLIVDKEEDLAGLPQNLIASAAETAKEAGMEGKWI FTLHNPSVMPFLQYADNRDLREKIFKGYINRGNNGNEYDNKEVVRKLLKARLEKAKLMGYENYASFALEERMAKTPDAVY KLLDQIWTPTLSKAKEELADINAEIKKDGKTFTAEGWDWRYYADRAKKAKFDLDENQVRPYLKLENVRDGVFYVANKLYG ITFTQLDNLPLPHPDAQAFECKDKDGSHLGVLYMDFFPRASKKGGAWCGSYRSQTYKDGKKVAPVVTVVCNFTKPAAGQP ALLSADEANTLFHEFGHALHNLFKDVHYYGVASVPRDFVELPSQIDEHWAFEPEVLNVYAKHYQTGEVIPAGLVEKMDKS GKYGQGFATAEYLAASLLDMDYHVLKEIPDDMDVMQFEAETLGKRGLLKQIPSRYRTTYFNHTMGGGYTAGYYSYIWAEV LDCDAYEAYKETGDIFNQEVAGKFRKYILTPGCIDDAMDMYVNFRGKEPGIDPLLKNRGLK
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=639, Percent_Identity=27.2300469483568, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI14149738, Length=640, Percent_Identity=29.375, Blast_Score=239, Evalue=5e-63, Organism=Homo sapiens, GI156105687, Length=570, Percent_Identity=26.4912280701754, Blast_Score=154, Evalue=4e-37, Organism=Escherichia coli, GI1787819, Length=680, Percent_Identity=41.6176470588235, Blast_Score=529, Evalue=1e-151, Organism=Escherichia coli, GI1789913, Length=686, Percent_Identity=32.6530612244898, Blast_Score=386, Evalue=1e-108, Organism=Caenorhabditis elegans, GI32565901, Length=542, Percent_Identity=19.5571955719557, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI71999758, Length=580, Percent_Identity=19.1379310344828, Blast_Score=74, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6319793, Length=666, Percent_Identity=29.7297297297297, Blast_Score=230, Evalue=5e-61, Organism=Saccharomyces cerevisiae, GI6322715, Length=711, Percent_Identity=24.0506329113924, Blast_Score=133, Evalue=9e-32, Organism=Drosophila melanogaster, GI21356111, Length=549, Percent_Identity=21.8579234972678, Blast_Score=147, Evalue=3e-35, Organism=Drosophila melanogaster, GI20129717, Length=409, Percent_Identity=26.161369193154, Blast_Score=134, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 79160; Mature: 79160
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHCH EEQQKEIDAIVNNPEPATFQNTIAALDQSGALLRKVSTVFYGLKSANTNDEMDALSRELS HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PLQSKHSDDIALNEKLFARIKAVYENPGNLDKEQKKLLEETYKDFVRGGANLDADSQKKL HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RELNSEISMLQLTFGQNMQKETNAFQLIVDKEEDLAGLPQNLIASAAETAKEAGMEGKWI HHHHHHHHEEEEHHCCCCHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCEE FTLHNPSVMPFLQYADNRDLREKIFKGYINRGNNGNEYDNKEVVRKLLKARLEKAKLMGY EEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC ENYASFALEERMAKTPDAVYKLLDQIWTPTLSKAKEELADINAEIKKDGKTFTAEGWDWR HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCEEECCCCCCH YYADRAKKAKFDLDENQVRPYLKLENVRDGVFYVANKLYGITFTQLDNLPLPHPDAQAFE HHHHHHHHCCCCCCHHHCCCHHEECCCCCHHHHHHHHHHCEEEHHCCCCCCCCCCCCCEE CKDKDGSHLGVLYMDFFPRASKKGGAWCGSYRSQTYKDGKKVAPVVTVVCNFTKPAAGQP CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHEECCCCCCCCCC ALLSADEANTLFHEFGHALHNLFKDVHYYGVASVPRDFVELPSQIDEHWAFEPEVLNVYA CEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHH KHYQTGEVIPAGLVEKMDKSGKYGQGFATAEYLAASLLDMDYHVLKEIPDDMDVMQFEAE HHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH TLGKRGLLKQIPSRYRTTYFNHTMGGGYTAGYYSYIWAEVLDCDAYEAYKETGDIFNQEV HHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGKFRKYILTPGCIDDAMDMYVNFRGKEPGIDPLLKNRGLK HHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCHHHHCCCCC >Mature Secondary Structure MKHILLAACAVAILSGCGSQGKQAAPTENPFLSEYTTPFQVPPFDQIKMEHYKPAFLQGM CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCHHHHCH EEQQKEIDAIVNNPEPATFQNTIAALDQSGALLRKVSTVFYGLKSANTNDEMDALSRELS HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH PLQSKHSDDIALNEKLFARIKAVYENPGNLDKEQKKLLEETYKDFVRGGANLDADSQKKL HHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH RELNSEISMLQLTFGQNMQKETNAFQLIVDKEEDLAGLPQNLIASAAETAKEAGMEGKWI HHHHHHHHEEEEHHCCCCHHCCCCEEEEEECCHHHHCCCHHHHHHHHHHHHHCCCCCCEE FTLHNPSVMPFLQYADNRDLREKIFKGYINRGNNGNEYDNKEVVRKLLKARLEKAKLMGY EEECCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC ENYASFALEERMAKTPDAVYKLLDQIWTPTLSKAKEELADINAEIKKDGKTFTAEGWDWR HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCEEECCCCCCH YYADRAKKAKFDLDENQVRPYLKLENVRDGVFYVANKLYGITFTQLDNLPLPHPDAQAFE HHHHHHHHCCCCCCHHHCCCHHEECCCCCHHHHHHHHHHCEEEHHCCCCCCCCCCCCCEE CKDKDGSHLGVLYMDFFPRASKKGGAWCGSYRSQTYKDGKKVAPVVTVVCNFTKPAAGQP CCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHEECCCCCCCCCC ALLSADEANTLFHEFGHALHNLFKDVHYYGVASVPRDFVELPSQIDEHWAFEPEVLNVYA CEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHCCCCHHHHHHHH KHYQTGEVIPAGLVEKMDKSGKYGQGFATAEYLAASLLDMDYHVLKEIPDDMDVMQFEAE HHCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH TLGKRGLLKQIPSRYRTTYFNHTMGGGYTAGYYSYIWAEVLDCDAYEAYKETGDIFNQEV HHHHCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH AGKFRKYILTPGCIDDAMDMYVNFRGKEPGIDPLLKNRGLK HHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]