| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005928
Identifier: 150005928
GI number: 150005928
Start: 4267699
End: 4268196
Strand: Direct
Name: 150005928
Synonym: BVU_3426
Alternate gene names: NA
Gene position: 4267699-4268196 (Clockwise)
Preceding gene: 150005927
Following gene: 150005929
Centisome position: 82.66
GC content: 40.56
Gene sequence:
>498_bases ATGACAAATCAAAATGAACTTTCCTTTTTGGAAATTCCCAATCAATCATCCGCGCAGATAATTAGCCGGAACGAGGTAGA GGTAATAGCTCCCGATGGTGAGGTCTTTACCGTATTATGTCAGATAGGTGCTTATACGAGCAAAGAGACACAAACCATAG AACTTTATTGGTTGGAGTCTTTGTTTGACAAGAACTTTTCCGCTGACAAAGAGGAAATGATTAATGCTATTTGGCGAGAA TCCATGCAGTTTGCTATTGGTGGCGGAATAATAGGCATCAGTACAGGTACTCGCCATAAGGATAGAGCACGTATCGGTGA ACGTATTCGTCAAATCCGTATGGATAGAGGTATGGAAGCTCGTGATTTAGCAAGACTTTCCGGCATAGATGCAGCTAATC TGTGTCGTATCGAGAATGGTAAGTATTCTGTAGGGCTAGATATTTTATCTAAGATAGCAGCAGCTTTAGGGAAGAAAATA GATTTTGTTGACCTTTAA
Upstream 100 bases:
>100_bases AAAGAATACCAATTGGTATATTTGCCAATTATTGCTATCTTTGCATTGTTTTGATAACATTTAAAGGTGGCGGCAACACT TAAAATGCGGCAGAATAATT
Downstream 100 bases:
>100_bases TAGCTTGTTATGATTGATATAGATGACTACAAAGTAGAGGTCTCTTGTGAATATAAGGGTGAAACCTATTCCGTACGAGA TAACGGTGCTATTATGAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTNQNELSFLEIPNQSSAQIISRNEVEVIAPDGEVFTVLCQIGAYTSKETQTIELYWLESLFDKNFSADKEEMINAIWRE SMQFAIGGGIIGISTGTRHKDRARIGERIRQIRMDRGMEARDLARLSGIDAANLCRIENGKYSVGLDILSKIAAALGKKI DFVDL
Sequences:
>Translated_165_residues MTNQNELSFLEIPNQSSAQIISRNEVEVIAPDGEVFTVLCQIGAYTSKETQTIELYWLESLFDKNFSADKEEMINAIWRE SMQFAIGGGIIGISTGTRHKDRARIGERIRQIRMDRGMEARDLARLSGIDAANLCRIENGKYSVGLDILSKIAAALGKKI DFVDL >Mature_164_residues TNQNELSFLEIPNQSSAQIISRNEVEVIAPDGEVFTVLCQIGAYTSKETQTIELYWLESLFDKNFSADKEEMINAIWRES MQFAIGGGIIGISTGTRHKDRARIGERIRQIRMDRGMEARDLARLSGIDAANLCRIENGKYSVGLDILSKIAAALGKKID FVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18443; Mature: 18312
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQNELSFLEIPNQSSAQIISRNEVEVIAPDGEVFTVLCQIGAYTSKETQTIELYWLES CCCCCCEEEEECCCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEEHHH LFDKNFSADKEEMINAIWRESMQFAIGGGIIGISTGTRHKDRARIGERIRQIRMDRGMEA HHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH RDLARLSGIDAANLCRIENGKYSVGLDILSKIAAALGKKIDFVDL HHHHHHCCCCHHHEEEECCCCEEECHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TNQNELSFLEIPNQSSAQIISRNEVEVIAPDGEVFTVLCQIGAYTSKETQTIELYWLES CCCCCEEEEECCCCCCCCEECCCCEEEECCCCHHHHHHHHHCCCCCCCCEEEEEEEHHH LFDKNFSADKEEMINAIWRESMQFAIGGGIIGISTGTRHKDRARIGERIRQIRMDRGMEA HHCCCCCCCHHHHHHHHHHHHHHEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCH RDLARLSGIDAANLCRIENGKYSVGLDILSKIAAALGKKIDFVDL HHHHHHCCCCHHHEEEECCCCEEECHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA