| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005887
Identifier: 150005887
GI number: 150005887
Start: 4224242
End: 4226578
Strand: Direct
Name: 150005887
Synonym: BVU_3383
Alternate gene names: NA
Gene position: 4224242-4226578 (Clockwise)
Preceding gene: 150005886
Following gene: 150005888
Centisome position: 81.81
GC content: 50.88
Gene sequence:
>2337_bases ATGGCATTCGAAGAAACCCGGGAACAGCAACAGATGTACAACTACTTCCGCAGTTGCATCTACATCTTTCTCATCATCGA GATTGTGATGAATCTTCCCATTACAGCGGATAACCGTGTCACGCAGTTTATTCTGGACCTTCTGGCACGCTTCAAGGTGT TCAATTCCGTATCGGGCTGCAAGGTGGCTGAGCTGATCTGCATCTGTGTGGTCTGTATCGGAACAAAGGCGAAGAAGGCG CTGAAGTTCAACGTGAAGACGATGGTCATCTATCCGGTGCTGGCGGGATTGACATTGGTCGGCATGTGTTTTATCTTTCA CGGCATGAATATCGGTATAAGCTGGTTTGGCTTCCCGGCCAACCGCATCCTTTATACACTCTGCTCGGTCGTAGGTACCA TGCTGGTGCATCAGGGGCTGGACGGTATTGCCAAGTACTACAACTACAAGGTGGGTGAAGACCGCTTCAACTTCGAGAAC GAATCGTTCCAGCAATCAGAAACTCTGGTAGCCAATGACTATTCGGTGAACATCCCGATGATTTACTACTGGAAGCAGAA GATGCACAAAGGCTGGATCAACATCATCAATCCTTTCCGTGGGACGATTGTGCTGGGTACACCGGGTTCGGGTAAGTCGT TCGGTATCATCGATCCTTTTATCCGTCAGCACGCTGCCAAGGGATTTGCTATCATGTGCTACGATTTCAAGTTCCCGACG TTGGCCAAGACACTTTTCTATCAGTATTGTAAGAACCGCAAGGCAGGTAAACTGCCGCAAAACTGCGGCTTTCGCATCAT CAACTTCACGGATGTGGAGTATTCCGACCGCATCAATCCGATTCAGCGCAAGTATATTCCGGACCTGGCGGCAGCATCGG AAACCGCTGCTACTTTGCTGGCTTCCCTGAACAAGGGAGGCGGTGAAAAGAAAGGCGGTTCGGAGGCGTTTTTTACCAAT TCGGCAGAGAACTTTTTGGCAGCCATCATCTATTTCTTTGTGAACTTCCATCCGGTAGGCTTCAAGAATGGCAAGAAGCT GAAACGCTATGTTTCCCTGGCACCAGACTCCGAAGTGGTCATACCCGAGGGAAATAAACTGGAATTGGTGATACGGAATT GGGACGATTACCATGCCCTCGATGCAAAGGGCAACATCATCCTGGACTTTGTGGACAAAAACGGCAACGACGTGTCAACG GATGAAGACCGGATGTTTGTGGATTTAAACGGCTTCTCGTATTTGGACCGGACGGGTAAACGAGTTCACATAGAACGCTG CTGGTACGAAGATGATAAAGGCAAGGAAGTGGAGCCGGACACCATCACCGGGGAATATTCGGATATGCCACATGTGCTGT CCTTCTTAGGCAGGTCCTACGACCAGGTGTTCAACATTCTGATGCAGGACGACAAGATTGCTTCCCTCATGGCGCCCTTT AAGAGTGCCTACGAGAACAAGGCGAACGACCAGTTGGAAGGTATGGTGGGTACCCTTCGTGTGAATGCAGCCAGACTGGT ATCTCCGGAAGCCTACTGGGTGTTTACGGGAGATGACTTCGACTTGAAGATTTCGGACAAGGCAAATCCGAGCTATCTGG TGATTGCCAACGACCCGGAGAAGGAACAGGTCATTGGCTCCTTGAATGCACTGGTGCTGAACCGACTGATTACCCGAGTC AATTCCAAGGGAAATATCCCGGTGAGCATCATCGTGGATGAGCTGCCTACACTCTACTTCCATAAGATAGACCGCTTGAT AGGTACGGCTCGCTCCAACAAGGTGGCAGTGACCCTGGGTTTTCAGGAGCTGCCGCAGCTTGAAGCGGACTATGGCAAGG TGGGTATGCAGAAGATTATCACGACCTGCGGCAACATCTTCATGGGTGCTGCCCGTAACAAGGAAACGCTGGAATGGGCG CAGAATGATGTGTTCGGCAAGGCGAAGCAGACTTCCCGGTCCATCTCCATCAACGACAACAAGGTATCGACCACCATCTC TGAGAAGATGGACTACCTGGTGCCTGCTGCCAAGATAGCGGATATGGCAACCGGCTGGCTGGCAGGCCAGGCTGCCCGTG ACTTCACGGCTACGGACGACAGCATGCTGAACCACTTCGACATCGAGCAGTCGGAGGAGTTCAAGACCACGAAGTACTTC TGCAAGACGCACTTCGACATGAAGAAGATTAAGGACGAAGAGAACCACTATGTACCGCTGCCGAAAATCTATGAGTTCAA GAACGACCGCGAGAAGGAAATCATGCTGAACCGCAACTTCAAGCGGGTGAACGAGGAGGTGGACAAGATGGTCAAGGAAC TGCTGGGTATGGCATAA
Upstream 100 bases:
>100_bases CAGAAGAACAACGTGAACTTCCTGCATGGAGATACCTTCCGTAACGGACTCTTACTCGGTGTGAAGATTCCTTTTTAGTA TTCACTCAATCTGATGGCTT
Downstream 100 bases:
>100_bases GCACCTTGAAGTAACACCTTTATAGAATAACGTAGTACATTGTAAAACAGTGAAATGAATATATATTATTCCACCAATAC TTCAATTCGATTGAGTGGTA
Product: putative mobilization protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MAFEETREQQQMYNYFRSCIYIFLIIEIVMNLPITADNRVTQFILDLLARFKVFNSVSGCKVAELICICVVCIGTKAKKA LKFNVKTMVIYPVLAGLTLVGMCFIFHGMNIGISWFGFPANRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGEDRFNFEN ESFQQSETLVANDYSVNIPMIYYWKQKMHKGWINIINPFRGTIVLGTPGSGKSFGIIDPFIRQHAAKGFAIMCYDFKFPT LAKTLFYQYCKNRKAGKLPQNCGFRIINFTDVEYSDRINPIQRKYIPDLAAASETAATLLASLNKGGGEKKGGSEAFFTN SAENFLAAIIYFFVNFHPVGFKNGKKLKRYVSLAPDSEVVIPEGNKLELVIRNWDDYHALDAKGNIILDFVDKNGNDVST DEDRMFVDLNGFSYLDRTGKRVHIERCWYEDDKGKEVEPDTITGEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPF KSAYENKANDQLEGMVGTLRVNAARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPEKEQVIGSLNALVLNRLITRV NSKGNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLGFQELPQLEADYGKVGMQKIITTCGNIFMGAARNKETLEWA QNDVFGKAKQTSRSISINDNKVSTTISEKMDYLVPAAKIADMATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYF CKTHFDMKKIKDEENHYVPLPKIYEFKNDREKEIMLNRNFKRVNEEVDKMVKELLGMA
Sequences:
>Translated_778_residues MAFEETREQQQMYNYFRSCIYIFLIIEIVMNLPITADNRVTQFILDLLARFKVFNSVSGCKVAELICICVVCIGTKAKKA LKFNVKTMVIYPVLAGLTLVGMCFIFHGMNIGISWFGFPANRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGEDRFNFEN ESFQQSETLVANDYSVNIPMIYYWKQKMHKGWINIINPFRGTIVLGTPGSGKSFGIIDPFIRQHAAKGFAIMCYDFKFPT LAKTLFYQYCKNRKAGKLPQNCGFRIINFTDVEYSDRINPIQRKYIPDLAAASETAATLLASLNKGGGEKKGGSEAFFTN SAENFLAAIIYFFVNFHPVGFKNGKKLKRYVSLAPDSEVVIPEGNKLELVIRNWDDYHALDAKGNIILDFVDKNGNDVST DEDRMFVDLNGFSYLDRTGKRVHIERCWYEDDKGKEVEPDTITGEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPF KSAYENKANDQLEGMVGTLRVNAARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPEKEQVIGSLNALVLNRLITRV NSKGNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLGFQELPQLEADYGKVGMQKIITTCGNIFMGAARNKETLEWA QNDVFGKAKQTSRSISINDNKVSTTISEKMDYLVPAAKIADMATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYF CKTHFDMKKIKDEENHYVPLPKIYEFKNDREKEIMLNRNFKRVNEEVDKMVKELLGMA >Mature_777_residues AFEETREQQQMYNYFRSCIYIFLIIEIVMNLPITADNRVTQFILDLLARFKVFNSVSGCKVAELICICVVCIGTKAKKAL KFNVKTMVIYPVLAGLTLVGMCFIFHGMNIGISWFGFPANRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGEDRFNFENE SFQQSETLVANDYSVNIPMIYYWKQKMHKGWINIINPFRGTIVLGTPGSGKSFGIIDPFIRQHAAKGFAIMCYDFKFPTL AKTLFYQYCKNRKAGKLPQNCGFRIINFTDVEYSDRINPIQRKYIPDLAAASETAATLLASLNKGGGEKKGGSEAFFTNS AENFLAAIIYFFVNFHPVGFKNGKKLKRYVSLAPDSEVVIPEGNKLELVIRNWDDYHALDAKGNIILDFVDKNGNDVSTD EDRMFVDLNGFSYLDRTGKRVHIERCWYEDDKGKEVEPDTITGEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPFK SAYENKANDQLEGMVGTLRVNAARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPEKEQVIGSLNALVLNRLITRVN SKGNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLGFQELPQLEADYGKVGMQKIITTCGNIFMGAARNKETLEWAQ NDVFGKAKQTSRSISINDNKVSTTISEKMDYLVPAAKIADMATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYFC KTHFDMKKIKDEENHYVPLPKIYEFKNDREKEIMLNRNFKRVNEEVDKMVKELLGMA
Specific function: Unknown
COG id: COG3505
COG function: function code U; Type IV secretory pathway, VirD4 components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88283; Mature: 88152
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFEETREQQQMYNYFRSCIYIFLIIEIVMNLPITADNRVTQFILDLLARFKVFNSVSGC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC KVAELICICVVCIGTKAKKALKFNVKTMVIYPVLAGLTLVGMCFIFHGMNIGISWFGFPA HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH NRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGEDRFNFENESFQQSETLVANDYSVNIPM HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCEEECCEEECCCE IYYWKQKMHKGWINIINPFRGTIVLGTPGSGKSFGIIDPFIRQHAAKGFAIMCYDFKFPT EEEEHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHH LAKTLFYQYCKNRKAGKLPQNCGFRIINFTDVEYSDRINPIQRKYIPDLAAASETAATLL HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHH ASLNKGGGEKKGGSEAFFTNSAENFLAAIIYFFVNFHPVGFKNGKKLKRYVSLAPDSEVV HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEE IPEGNKLELVIRNWDDYHALDAKGNIILDFVDKNGNDVSTDEDRMFVDLNGFSYLDRTGK ECCCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHCCCC RVHIERCWYEDDKGKEVEPDTITGEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPF EEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH KSAYENKANDQLEGMVGTLRVNAARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPE HHHHCCCCCHHHHHHHEEEEECHHHEECCCEEEEEECCCEEEEEECCCCCCEEEEECCCC KEQVIGSLNALVLNRLITRVNSKGNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEEC FQELPQLEADYGKVGMQKIITTCGNIFMGAARNKETLEWAQNDVFGKAKQTSRSISINDN HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCEEEECCC KVSTTISEKMDYLVPAAKIADMATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYF CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH CKTHFDMKKIKDEENHYVPLPKIYEFKNDREKEIMLNRNFKRVNEEVDKMVKELLGMA HHHCCCHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AFEETREQQQMYNYFRSCIYIFLIIEIVMNLPITADNRVTQFILDLLARFKVFNSVSGC CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC KVAELICICVVCIGTKAKKALKFNVKTMVIYPVLAGLTLVGMCFIFHGMNIGISWFGFPA HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCH NRILYTLCSVVGTMLVHQGLDGIAKYYNYKVGEDRFNFENESFQQSETLVANDYSVNIPM HHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCCCCCHHCCCCEEECCEEECCCE IYYWKQKMHKGWINIINPFRGTIVLGTPGSGKSFGIIDPFIRQHAAKGFAIMCYDFKFPT EEEEHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCHH LAKTLFYQYCKNRKAGKLPQNCGFRIINFTDVEYSDRINPIQRKYIPDLAAASETAATLL HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHHHHHHHHHH ASLNKGGGEKKGGSEAFFTNSAENFLAAIIYFFVNFHPVGFKNGKKLKRYVSLAPDSEVV HHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCEE IPEGNKLELVIRNWDDYHALDAKGNIILDFVDKNGNDVSTDEDRMFVDLNGFSYLDRTGK ECCCCEEEEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEECCCHHHHCCCC RVHIERCWYEDDKGKEVEPDTITGEYSDMPHVLSFLGRSYDQVFNILMQDDKIASLMAPF EEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHH KSAYENKANDQLEGMVGTLRVNAARLVSPEAYWVFTGDDFDLKISDKANPSYLVIANDPE HHHHCCCCCHHHHHHHEEEEECHHHEECCCEEEEEECCCEEEEEECCCCCCEEEEECCCC KEQVIGSLNALVLNRLITRVNSKGNIPVSIIVDELPTLYFHKIDRLIGTARSNKVAVTLG HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCEEEEEEC FQELPQLEADYGKVGMQKIITTCGNIFMGAARNKETLEWAQNDVFGKAKQTSRSISINDN HHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCEEEECCC KVSTTISEKMDYLVPAAKIADMATGWLAGQAARDFTATDDSMLNHFDIEQSEEFKTTKYF CHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHH CKTHFDMKKIKDEENHYVPLPKIYEFKNDREKEIMLNRNFKRVNEEVDKMVKELLGMA HHHCCCHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA