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The map label for this gene is ybhR [H]

Identifier: 150005836

GI number: 150005836

Start: 4166092

End: 4167066

Strand: Direct

Name: ybhR [H]

Synonym: BVU_3332

Alternate gene names: 150005836

Gene position: 4166092-4167066 (Clockwise)

Preceding gene: 150005835

Following gene: 150005837

Centisome position: 80.69

GC content: 43.38

Gene sequence:

>975_bases
ATGAATCTCAGCATAGTGGATAATGACCGCAGCCCCTATTCTACCCGATTAGTACAGAAAGTGGAAGCTTCCGAATATTT
TCATCTGATAGATGTATCAAACAACTATCAGGAAGCGATGCAATGCATTGAAAAAGGAGATGCCGACCTCATTTTGGAAA
TCCCGCCACACTTTGAACGCGATTTGCTGAAAACCGGCGTAGCAAAAGTACTGGTTTCAGCCAACACCGTAAATGGGACG
AAAGGAACGTTGGGAAGTTCCTACCTCAGTAATATAGTGAATGCCTATGCCACTGAAATCCGGATTTCCCATTCCGGCTC
TATTTCTCCCTCCCCGGTGATAAAAATAGATACCCAAGGACGTTTCAACCTCTATCTGGATTATAAGGTATTTATGGTTC
CGGCACTGATGGCGCAATTGTTGATGATGTTATGCGGATTTCTGCCAGCTCTTAATATTGTGAGTGAAAAAGAATTCGGA
ACCATCGAACAAATCAATGTGACTCCTGTAAGCAAGTTCACTTTCATTCTGGCCAAGCTGATTCCTTACTGGGTAGCCGG
CATGCTGATCCTCACAATCAGTATCATTCTGGCATGGTTAGTCTATGGTCTGGTTCCGGCCGGTCATTTATGGCTGCTTC
ATTTCTTCGCATTGCTGTTCATTATCGTCATTTCGGGTATGGGACTGGTAGTTTCCAACTATTCCCGAACCATGCAGCAG
GCCATGTTTGTCATGTTTTTCTTTGTGATTATCATCATGCTGATGAGCGGATTATTCACCCCCATCAACAGTATGCCCGA
GTGGGCTCAAGCCATCACCATAGCCAATCCCTTGAAATATTTTATACAAGTGACACGTATGGTCTATTTGAAAGGAAGCG
GATTCGATGACTTGATCATGCAATTTATTGCCTTGCTTTTTATGGCTATCATGTTGAACGGTTGGGCCGTGTTCAGTTAT
AAAAAGAACTCATAA

Upstream 100 bases:

>100_bases
AACAATTGAACAACATACAGCAACGTCATACTCTAGAAGCTACCTATCGTGCTTACGGCAAGATGTTGAGTCTTGGGCCG
CAAACTTCGAAATCAAAAAT

Downstream 100 bases:

>100_bases
CAGATAAATCGGAACATTTGCTTGTTTATCATTGTTAATATCAGTAGCTTAGCAGCCTATTGCTAACCTGATTTTAATTA
TCTAAAAGAAAAAGTTATGA

Product: putative ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNLSIVDNDRSPYSTRLVQKVEASEYFHLIDVSNNYQEAMQCIEKGDADLILEIPPHFERDLLKTGVAKVLVSANTVNGT
KGTLGSSYLSNIVNAYATEIRISHSGSISPSPVIKIDTQGRFNLYLDYKVFMVPALMAQLLMMLCGFLPALNIVSEKEFG
TIEQINVTPVSKFTFILAKLIPYWVAGMLILTISIILAWLVYGLVPAGHLWLLHFFALLFIIVISGMGLVVSNYSRTMQQ
AMFVMFFFVIIIMLMSGLFTPINSMPEWAQAITIANPLKYFIQVTRMVYLKGSGFDDLIMQFIALLFMAIMLNGWAVFSY
KKNS

Sequences:

>Translated_324_residues
MNLSIVDNDRSPYSTRLVQKVEASEYFHLIDVSNNYQEAMQCIEKGDADLILEIPPHFERDLLKTGVAKVLVSANTVNGT
KGTLGSSYLSNIVNAYATEIRISHSGSISPSPVIKIDTQGRFNLYLDYKVFMVPALMAQLLMMLCGFLPALNIVSEKEFG
TIEQINVTPVSKFTFILAKLIPYWVAGMLILTISIILAWLVYGLVPAGHLWLLHFFALLFIIVISGMGLVVSNYSRTMQQ
AMFVMFFFVIIIMLMSGLFTPINSMPEWAQAITIANPLKYFIQVTRMVYLKGSGFDDLIMQFIALLFMAIMLNGWAVFSY
KKNS
>Mature_324_residues
MNLSIVDNDRSPYSTRLVQKVEASEYFHLIDVSNNYQEAMQCIEKGDADLILEIPPHFERDLLKTGVAKVLVSANTVNGT
KGTLGSSYLSNIVNAYATEIRISHSGSISPSPVIKIDTQGRFNLYLDYKVFMVPALMAQLLMMLCGFLPALNIVSEKEFG
TIEQINVTPVSKFTFILAKLIPYWVAGMLILTISIILAWLVYGLVPAGHLWLLHFFALLFIIVISGMGLVVSNYSRTMQQ
AMFVMFFFVIIIMLMSGLFTPINSMPEWAQAITIANPLKYFIQVTRMVYLKGSGFDDLIMQFIALLFMAIMLNGWAVFSY
KKNS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=295, Percent_Identity=27.4576271186441, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI48994943, Length=325, Percent_Identity=27.3846153846154, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI226510979, Length=324, Percent_Identity=23.1481481481481, Blast_Score=108, Evalue=5e-25,
Organism=Escherichia coli, GI1787011, Length=301, Percent_Identity=26.2458471760797, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 36381; Mature: 36381

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSIVDNDRSPYSTRLVQKVEASEYFHLIDVSNNYQEAMQCIEKGDADLILEIPPHFER
CCCEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCHHH
DLLKTGVAKVLVSANTVNGTKGTLGSSYLSNIVNAYATEIRISHSGSISPSPVIKIDTQG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCC
RFNLYLDYKVFMVPALMAQLLMMLCGFLPALNIVSEKEFGTIEQINVTPVSKFTFILAKL
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHH
IPYWVAGMLILTISIILAWLVYGLVPAGHLWLLHFFALLFIIVISGMGLVVSNYSRTMQQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AMFVMFFFVIIIMLMSGLFTPINSMPEWAQAITIANPLKYFIQVTRMVYLKGSGFDDLIM
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QFIALLFMAIMLNGWAVFSYKKNS
HHHHHHHHHHHHCCEEEEEEECCC
>Mature Secondary Structure
MNLSIVDNDRSPYSTRLVQKVEASEYFHLIDVSNNYQEAMQCIEKGDADLILEIPPHFER
CCCEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCHHH
DLLKTGVAKVLVSANTVNGTKGTLGSSYLSNIVNAYATEIRISHSGSISPSPVIKIDTQG
HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCC
RFNLYLDYKVFMVPALMAQLLMMLCGFLPALNIVSEKEFGTIEQINVTPVSKFTFILAKL
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHH
IPYWVAGMLILTISIILAWLVYGLVPAGHLWLLHFFALLFIIVISGMGLVVSNYSRTMQQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AMFVMFFFVIIIMLMSGLFTPINSMPEWAQAITIANPLKYFIQVTRMVYLKGSGFDDLIM
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QFIALLFMAIMLNGWAVFSYKKNS
HHHHHHHHHHHHCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]