Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005799
Identifier: 150005799
GI number: 150005799
Start: 4123837
End: 4124655
Strand: Direct
Name: 150005799
Synonym: BVU_3292
Alternate gene names: NA
Gene position: 4123837-4124655 (Clockwise)
Preceding gene: 150005798
Following gene: 150005800
Centisome position: 79.87
GC content: 34.68
Gene sequence:
>819_bases ATGACAAAAATATATTTCATTTTGATATTCCTGATAAGTTTTGTCACAGTCTACGCACAGAATGAATCAGACTCTGCACA GGTTACCGCCCAAACAGAAATGCCACAAAGTGCTGCTGTGCAAACTTTCCCAACAAAGACAGAAGCCGATAGTGCATATA TAAGAAACGACTTTGCAGCTTCTGTAGAGATGTATGAGAATATATTAAAAAACGAGGGGGAATCTTCCGATATTTATTAT AATTTAGGTAACAGCTATTATAAAATGAATAACATTGCCAAAGCTGTCCTCAATTACGAACGTGCCTTGTTGCTAAACCC AGGAAATAGTGATATTCGTTTCAACCTAGAACTGGCTAGAAGCAAAACTGTAGACAAGGTAATCCCTTCTAGTAAAATGT TTTTCGTTACCTGGACTCAATCACTTATTAATACAATGAGTGAAAAGGCATGGGCACATACAGGCATCATCATGTTTATT CTGATGATATTGGCACTGTCTTTATTTATTTTCGGAAAACGAGTAGTCTTGAAGAAAGTAGGATTTATTTCAGCAATCTT TTTCTTTCTAGTGACTATTTTAGCAAATATATTTGCCTCAGAACAAAAATCTGAATTAATTAATCATGATAACGCTATTA TAATGGCTCCTAGCGTTACAGTCAAAAGTACTCCTAACCAAAGTGGAACAGACTTATTTATTCTTCATGAAGGTAGGAAA GTAATAATTAAAGATAATACGATGAAGGAGTGGAAAGAAATTAAACTGGAAGACGGTAATGTGGGATGGGTACCTACCAA TGTTATTGAAATCATTTAA
Upstream 100 bases:
>100_bases AATCAGAATGAAGCTATGGATAAAGTATATTCTTCGGCTGTTGAGGTCATCAGCAAAATGGAGAATAGTATAAAACACTA AATCAAAGGAGATTATAACA
Downstream 100 bases:
>100_bases AACATAATCAATGGATATACAACAGTACATAGCAGCAGATAAAGAATTACTACTGAATTTGAACGGAAGCCAATCCTTAT TTTGGGACGGATTCATGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: TPR Repeat-Containing Protein; BatE Protein; Aerotolerance-Related Protein BatE; BatE TRP Domain Containing Protein; Tetratricopeptide Repeat Protein; BatD Protein; Tetratricopeptide Tpr_1 Repeat-Containing Protein; SH3 Type 3 Domain Protein; BatD/BatE Protein; TRP Domain-Containing Protein BatE; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MTKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAASVEMYENILKNEGESSDIYY NLGNSYYKMNNIAKAVLNYERALLLNPGNSDIRFNLELARSKTVDKVIPSSKMFFVTWTQSLINTMSEKAWAHTGIIMFI LMILALSLFIFGKRVVLKKVGFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTVKSTPNQSGTDLFILHEGRK VIIKDNTMKEWKEIKLEDGNVGWVPTNVIEII
Sequences:
>Translated_272_residues MTKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAASVEMYENILKNEGESSDIYY NLGNSYYKMNNIAKAVLNYERALLLNPGNSDIRFNLELARSKTVDKVIPSSKMFFVTWTQSLINTMSEKAWAHTGIIMFI LMILALSLFIFGKRVVLKKVGFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTVKSTPNQSGTDLFILHEGRK VIIKDNTMKEWKEIKLEDGNVGWVPTNVIEII >Mature_271_residues TKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAASVEMYENILKNEGESSDIYYN LGNSYYKMNNIAKAVLNYERALLLNPGNSDIRFNLELARSKTVDKVIPSSKMFFVTWTQSLINTMSEKAWAHTGIIMFIL MILALSLFIFGKRVVLKKVGFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTVKSTPNQSGTDLFILHEGRKV IIKDNTMKEWKEIKLEDGNVGWVPTNVIEII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30729; Mature: 30598
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAA CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHCEEECCCCCCCCCHHHHHHHHH SVEMYENILKNEGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDIRFNLELAR HHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHHHHCEEEEECCCCCCEEEEEEECC SKTVDKVIPSSKMFFVTWTQSLINTMSEKAWAHTGIIMFILMILALSLFIFGKRVVLKKV CCCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTVKSTPNQSGTDLFILHEGRK HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCEEEECCCCCCCCEEEEEECCCE VIIKDNTMKEWKEIKLEDGNVGWVPTNVIEII EEEECCCHHHHHHEEEECCCCCCCCHHHEEEC >Mature Secondary Structure TKIYFILIFLISFVTVYAQNESDSAQVTAQTEMPQSAAVQTFPTKTEADSAYIRNDFAA CHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHCEEECCCCCCCCCHHHHHHHHH SVEMYENILKNEGESSDIYYNLGNSYYKMNNIAKAVLNYERALLLNPGNSDIRFNLELAR HHHHHHHHHHCCCCCCCEEEECCCCEEHHHHHHHHHHHHCEEEEECCCCCCEEEEEEECC SKTVDKVIPSSKMFFVTWTQSLINTMSEKAWAHTGIIMFILMILALSLFIFGKRVVLKKV CCCHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFISAIFFFLVTILANIFASEQKSELINHDNAIIMAPSVTVKSTPNQSGTDLFILHEGRK HHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCEEEECCCCCCCCEEEEEECCCE VIIKDNTMKEWKEIKLEDGNVGWVPTNVIEII EEEECCCHHHHHHEEEECCCCCCCCHHHEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA