Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005794
Identifier: 150005794
GI number: 150005794
Start: 4118075
End: 4119172
Strand: Direct
Name: 150005794
Synonym: BVU_3287
Alternate gene names: NA
Gene position: 4118075-4119172 (Clockwise)
Preceding gene: 150005793
Following gene: 150005795
Centisome position: 79.76
GC content: 45.08
Gene sequence:
>1098_bases ATGAATATACTGAATACTAGCAAAAAGTTCTTGAAAGCTGGAGTTTGTGCAATTATGCTGATAACAGCCGGACAGGCACA GGCACAGCAGGTTACGGTAGACGCCAGCATTGACTCGCTGCAACTTCTCATTGGCGAACAGGCTAAAGTGAAGCTGGAAA TCAGCATGGATGCCAAGCAAAAACTGCAACTTCCGTTCCTGCGCGATACATTGGTAAAAGGAGTGGAGATATTGGATATA GCCAAGCCTGATACCCAGATGCTGAACGATGGAAAACGTATGCTGATAAAACAGGAATATACAATAACCTCTTTTGACTC GGCACTTTACTATCTCCCCCCATTCGAGGTGATGGTAAACGGAGAGCCTTACCGGTCCAAAGCATTGGCCGTAAAAGTAT ATTCCATTCCGGTAGACACGCTGCATCCCGAACAATTCTTCGGACCGAAGACCGTTCGCGAAGTACCTATCACCTGGGAT GACGTATCGGCCATCGTATGGCTTACCTTGCTGATGCTTGCTTTGGGCGGACTGGCTTACTATCTGTTTGTACGCTACAA GGATAACAAGCCTATCATCAAGAAGATCAAGATTGAACCGAAGTTGCCGCCACACCAGCAGGCGTTGAAGGAAATAGAGC GTATCAAGGGAGACAAAACCTTGCGTACAGCCGATCCGAAGACCTATTATACCGAGCTGACGGATGTACTCCGCACTTAT ATGGAAGAACGATTCGGCTTTAACGCTATGGAGATGACTTCATCCGAAATTATTGATAAGCTACAGGAAATCAACGACAA AGAATCTATCAAGGATTTGATGTATTTGTTCCAGACTGCCGACTTGGTGAAATTCGCCAAACATTCTCCGTTGATGAACG AAAATGATATGAATCTGGTAAACGCAGTAGACTTCATCAATAATACAAAAGTGGAACCAGACCCGAATGCAAAGCCCGAA CCTACGGAAATCACCGTGGAGGAAAAGCGAAGCAAACAGGGCAGAATGATTCTGCTGGGCAGCATCAGCATCATTGTTAT TGCTATTGTGGTAATTCTGTATAAGGTGCTGAGTGGTGTATATAACCTCTGGTTTTAA
Upstream 100 bases:
>100_bases AAACATTTACCAAAAGTAATGTGGACTCTGTATCTATCCGCACGGATCAGGATTATGTGAAATCGTTGCTTAACTTATTT GCTAAACGAAATTAAAGAAT
Downstream 100 bases:
>100_bases CAAATAAATACTAGGAACAATGATTTTTGCAAATATTGAATATCTATTTCTGCTGGTTCTGCTCATACCTTATATAGTAT GGTACGTCATGAAGCGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MNILNTSKKFLKAGVCAIMLITAGQAQAQQVTVDASIDSLQLLIGEQAKVKLEISMDAKQKLQLPFLRDTLVKGVEILDI AKPDTQMLNDGKRMLIKQEYTITSFDSALYYLPPFEVMVNGEPYRSKALAVKVYSIPVDTLHPEQFFGPKTVREVPITWD DVSAIVWLTLLMLALGGLAYYLFVRYKDNKPIIKKIKIEPKLPPHQQALKEIERIKGDKTLRTADPKTYYTELTDVLRTY MEERFGFNAMEMTSSEIIDKLQEINDKESIKDLMYLFQTADLVKFAKHSPLMNENDMNLVNAVDFINNTKVEPDPNAKPE PTEITVEEKRSKQGRMILLGSISIIVIAIVVILYKVLSGVYNLWF
Sequences:
>Translated_365_residues MNILNTSKKFLKAGVCAIMLITAGQAQAQQVTVDASIDSLQLLIGEQAKVKLEISMDAKQKLQLPFLRDTLVKGVEILDI AKPDTQMLNDGKRMLIKQEYTITSFDSALYYLPPFEVMVNGEPYRSKALAVKVYSIPVDTLHPEQFFGPKTVREVPITWD DVSAIVWLTLLMLALGGLAYYLFVRYKDNKPIIKKIKIEPKLPPHQQALKEIERIKGDKTLRTADPKTYYTELTDVLRTY MEERFGFNAMEMTSSEIIDKLQEINDKESIKDLMYLFQTADLVKFAKHSPLMNENDMNLVNAVDFINNTKVEPDPNAKPE PTEITVEEKRSKQGRMILLGSISIIVIAIVVILYKVLSGVYNLWF >Mature_365_residues MNILNTSKKFLKAGVCAIMLITAGQAQAQQVTVDASIDSLQLLIGEQAKVKLEISMDAKQKLQLPFLRDTLVKGVEILDI AKPDTQMLNDGKRMLIKQEYTITSFDSALYYLPPFEVMVNGEPYRSKALAVKVYSIPVDTLHPEQFFGPKTVREVPITWD DVSAIVWLTLLMLALGGLAYYLFVRYKDNKPIIKKIKIEPKLPPHQQALKEIERIKGDKTLRTADPKTYYTELTDVLRTY MEERFGFNAMEMTSSEIIDKLQEINDKESIKDLMYLFQTADLVKFAKHSPLMNENDMNLVNAVDFINNTKVEPDPNAKPE PTEITVEEKRSKQGRMILLGSISIIVIAIVVILYKVLSGVYNLWF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41515; Mature: 41515
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILNTSKKFLKAGVCAIMLITAGQAQAQQVTVDASIDSLQLLIGEQAKVKLEISMDAKQ CCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEECCCHH KLQLPFLRDTLVKGVEILDIAKPDTQMLNDGKRMLIKQEYTITSFDSALYYLPPFEVMVN HCCCCHHHHHHHCCCEEEECCCCCHHHHCCCHHEEEEECCEEEECCCEEEECCCEEEEEC GEPYRSKALAVKVYSIPVDTLHPEQFFGPKTVREVPITWDDVSAIVWLTLLMLALGGLAY CCCCCCCEEEEEEEEECCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEE YLFVRYKDNKPIIKKIKIEPKLPPHQQALKEIERIKGDKTLRTADPKTYYTELTDVLRTY EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH MEERFGFNAMEMTSSEIIDKLQEINDKESIKDLMYLFQTADLVKFAKHSPLMNENDMNLV HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH NAVDFINNTKVEPDPNAKPEPTEITVEEKRSKQGRMILLGSISIIVIAIVVILYKVLSGV HHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH YNLWF HHHCC >Mature Secondary Structure MNILNTSKKFLKAGVCAIMLITAGQAQAQQVTVDASIDSLQLLIGEQAKVKLEISMDAKQ CCCCHHHHHHHHHHHHHEEEEECCCCCCCEEEEECCHHHHHHHCCCCCEEEEEEECCCHH KLQLPFLRDTLVKGVEILDIAKPDTQMLNDGKRMLIKQEYTITSFDSALYYLPPFEVMVN HCCCCHHHHHHHCCCEEEECCCCCHHHHCCCHHEEEEECCEEEECCCEEEECCCEEEEEC GEPYRSKALAVKVYSIPVDTLHPEQFFGPKTVREVPITWDDVSAIVWLTLLMLALGGLAY CCCCCCCEEEEEEEEECCCCCCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEE YLFVRYKDNKPIIKKIKIEPKLPPHQQALKEIERIKGDKTLRTADPKTYYTELTDVLRTY EEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH MEERFGFNAMEMTSSEIIDKLQEINDKESIKDLMYLFQTADLVKFAKHSPLMNENDMNLV HHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH NAVDFINNTKVEPDPNAKPEPTEITVEEKRSKQGRMILLGSISIIVIAIVVILYKVLSGV HHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH YNLWF HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA