| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is lysC [H]
Identifier: 150005767
GI number: 150005767
Start: 4091588
End: 4092934
Strand: Direct
Name: lysC [H]
Synonym: BVU_3260
Alternate gene names: 150005767
Gene position: 4091588-4092934 (Clockwise)
Preceding gene: 150005761
Following gene: 150005768
Centisome position: 79.25
GC content: 38.38
Gene sequence:
>1347_bases ATGAAAGTATATAATTTAGAAAATATTAAATCTGCTGCCGAACTGAAACATCGGACTGAAGTAATTAGCATGAACGAACG TTCTATTATAGTGCTCGACACTTTTACCGGCATTGCCCAAAAGCTGCAAGCTGTTTCTATTTCTTTATTCCATCTCGATA TCGAAAAGGTTATGAATCAATTGCAGGATTTCGAGAATGATTGTGGAAATTGGCTGGACAATCTTCTTTCCTCCGAAATG CAGAAAGCAGAAGCTGCCAAAGAAATAAAAGTACACATCGATCAAATTTCCCGTTTATGTAATGAAAATCCGAACATCAT TGACGATCATGAGATTATGGCTCACGGAGCAATGATATCCTCTCTTATTCTGTCACATTATTTAGAAGAATGTACGAAAA AGAACTTCATCTTGAACTCATGTCATTTCATGCGGCTAGGGCTTGATCGGAAACCGGATATAAAGTATGTGAAAAAAAAT GTAGAAGAACTGATGAAAGCCTGTCCCGATGTCCCCATTCTTATTACCCAAAGCCGTTTGTGTAAAAATGCATATGATGA AGTGGATTTATTCCCACAAATAGGAAATGAGTATTATGCCACTGTTATCGGGGCTGTATTCCATGCGGATGAAATTATAA CATCCTTACGTTCTGATGAAATTTGTTTCCAAGGTATGGAACATACTCGGACTCTTACATACGGTGAAGCCGAGAATTTT ATTGATAGCGGCATTGCATTGCTTCATCCGGAATGTATTCTGCTGGCGCGCACCGTCGGTATGGCCATTGTATTGATAAA AACACCGGAAGATACATTACGGATATCATCAGAAAAAACAGGAACAAAAGTAAAAGCTGCTGTTTCACGCAGAGGTGTGG TCTTTGTCAAACTTCGTTCGTTAGGGGTTCTTACTTCTTATCTATTTATTGGAAAAGTATTTGATGTGTTCGAGAAATAT AAGGTTCCTGTCTATTTAGCGACTTCCTCTAATGTGAGTGTTTCATTGGCTGTGAAATGTAGCAACGACACATTACGCCT GATATATCGTGAATTACATAAGTATGCGGAAATAGGAATGGAAACAGAAATGTCTGTGGTCAGCGTTATTGGCGATCTAA ATTGGGAAAAGCATACAGGGTTGGAAGCCAGAATTATAGAAACGCTGAAAGAGATGCCGGTATGCATGATTTCATATGGC AGCAGCACTCACAATCTTTCAGTGCTGGTACGGGAACAAGATAGAGAAAAGGCATTAATGACACTGTGCAAAGCCTTTCT AGATATTCCATCAGAAAAATTTGATGTAATAAAACAAACTCAATTACAAGACTCTTTTGTCATGTGA
Upstream 100 bases:
>100_bases ACTAATAAAGATGAAACTAGTAAGAATATAGCTTTCCAATATGGAAATTTGCCTGTTAAAATGAAAAAGAAACTCGAAAA GAATAAAATGCAATACAAAA
Downstream 100 bases:
>100_bases CCTTCTTGAATAAACAGAAGCAACAAATTTGCCCGACAGGTATTTGTTGCTTTTGTTTTTGATTAAATAAAATATTATTT TATCCTTATAGCGATTTATA
Product: lysine-sensitive aspartokinase III
Products: NA
Alternate protein names: Aspartate kinase III; AKIII; Lysine-sensitive aspartokinase III [H]
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MKVYNLENIKSAAELKHRTEVISMNERSIIVLDTFTGIAQKLQAVSISLFHLDIEKVMNQLQDFENDCGNWLDNLLSSEM QKAEAAKEIKVHIDQISRLCNENPNIIDDHEIMAHGAMISSLILSHYLEECTKKNFILNSCHFMRLGLDRKPDIKYVKKN VEELMKACPDVPILITQSRLCKNAYDEVDLFPQIGNEYYATVIGAVFHADEIITSLRSDEICFQGMEHTRTLTYGEAENF IDSGIALLHPECILLARTVGMAIVLIKTPEDTLRISSEKTGTKVKAAVSRRGVVFVKLRSLGVLTSYLFIGKVFDVFEKY KVPVYLATSSNVSVSLAVKCSNDTLRLIYRELHKYAEIGMETEMSVVSVIGDLNWEKHTGLEARIIETLKEMPVCMISYG SSTHNLSVLVREQDREKALMTLCKAFLDIPSEKFDVIKQTQLQDSFVM
Sequences:
>Translated_448_residues MKVYNLENIKSAAELKHRTEVISMNERSIIVLDTFTGIAQKLQAVSISLFHLDIEKVMNQLQDFENDCGNWLDNLLSSEM QKAEAAKEIKVHIDQISRLCNENPNIIDDHEIMAHGAMISSLILSHYLEECTKKNFILNSCHFMRLGLDRKPDIKYVKKN VEELMKACPDVPILITQSRLCKNAYDEVDLFPQIGNEYYATVIGAVFHADEIITSLRSDEICFQGMEHTRTLTYGEAENF IDSGIALLHPECILLARTVGMAIVLIKTPEDTLRISSEKTGTKVKAAVSRRGVVFVKLRSLGVLTSYLFIGKVFDVFEKY KVPVYLATSSNVSVSLAVKCSNDTLRLIYRELHKYAEIGMETEMSVVSVIGDLNWEKHTGLEARIIETLKEMPVCMISYG SSTHNLSVLVREQDREKALMTLCKAFLDIPSEKFDVIKQTQLQDSFVM >Mature_448_residues MKVYNLENIKSAAELKHRTEVISMNERSIIVLDTFTGIAQKLQAVSISLFHLDIEKVMNQLQDFENDCGNWLDNLLSSEM QKAEAAKEIKVHIDQISRLCNENPNIIDDHEIMAHGAMISSLILSHYLEECTKKNFILNSCHFMRLGLDRKPDIKYVKKN VEELMKACPDVPILITQSRLCKNAYDEVDLFPQIGNEYYATVIGAVFHADEIITSLRSDEICFQGMEHTRTLTYGEAENF IDSGIALLHPECILLARTVGMAIVLIKTPEDTLRISSEKTGTKVKAAVSRRGVVFVKLRSLGVLTSYLFIGKVFDVFEKY KVPVYLATSSNVSVSLAVKCSNDTLRLIYRELHKYAEIGMETEMSVVSVIGDLNWEKHTGLEARIIETLKEMPVCMISYG SSTHNLSVLVREQDREKALMTLCKAFLDIPSEKFDVIKQTQLQDSFVM
Specific function: Lysine biosynthesis; first step. [C]
COG id: COG0527
COG function: function code E; Aspartokinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1790455, Length=353, Percent_Identity=23.7960339943343, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR001048 - InterPro: IPR005260 - InterPro: IPR001341 - InterPro: IPR018042 [H]
Pfam domain/function: PF00696 AA_kinase; PF01842 ACT [H]
EC number: =2.7.2.4 [H]
Molecular weight: Translated: 50718; Mature: 50718
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVYNLENIKSAAELKHRTEVISMNERSIIVLDTFTGIAQKLQAVSISLFHLDIEKVMNQ CCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHEEEEEHHHHHHH LQDFENDCGNWLDNLLSSEMQKAEAAKEIKVHIDQISRLCNENPNIIDDHEIMAHGAMIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SLILSHYLEECTKKNFILNSCHFMRLGLDRKPDIKYVKKNVEELMKACPDVPILITQSRL HHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHH CKNAYDEVDLFPQIGNEYYATVIGAVFHADEIITSLRSDEICFQGMEHTRTLTYGEAENF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCEEECCCHHHH IDSGIALLHPECILLARTVGMAIVLIKTPEDTLRISSEKTGTKVKAAVSRRGVVFVKLRS HHCCHHHHCHHHHHHHHHHCEEEEEEECCCHHEEECCCCCCCHHHHHHHHCCEEEEEEHH LGVLTSYLFIGKVFDVFEKYKVPVYLATSSNVSVSLAVKCSNDTLRLIYRELHKYAEIGM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC ETEMSVVSVIGDLNWEKHTGLEARIIETLKEMPVCMISYGSSTHNLSVLVREQDREKALM CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCHHHHHHH TLCKAFLDIPSEKFDVIKQTQLQDSFVM HHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVYNLENIKSAAELKHRTEVISMNERSIIVLDTFTGIAQKLQAVSISLFHLDIEKVMNQ CCCCCCHHHHHHHHHHHHHHHEEECCCEEEEEECHHHHHHHHHHHHHHEEEEEHHHHHHH LQDFENDCGNWLDNLLSSEMQKAEAAKEIKVHIDQISRLCNENPNIIDDHEIMAHGAMIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH SLILSHYLEECTKKNFILNSCHFMRLGLDRKPDIKYVKKNVEELMKACPDVPILITQSRL HHHHHHHHHHHHHCCCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHH CKNAYDEVDLFPQIGNEYYATVIGAVFHADEIITSLRSDEICFQGMEHTRTLTYGEAENF HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHCCEEECCCHHHH IDSGIALLHPECILLARTVGMAIVLIKTPEDTLRISSEKTGTKVKAAVSRRGVVFVKLRS HHCCHHHHCHHHHHHHHHHCEEEEEEECCCHHEEECCCCCCCHHHHHHHHCCEEEEEEHH LGVLTSYLFIGKVFDVFEKYKVPVYLATSSNVSVSLAVKCSNDTLRLIYRELHKYAEIGM HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCC ETEMSVVSVIGDLNWEKHTGLEARIIETLKEMPVCMISYGSSTHNLSVLVREQDREKALM CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEEECCHHHHHHH TLCKAFLDIPSEKFDVIKQTQLQDSFVM HHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3003049; 8265357; 9278503; 6312411 [H]