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The map label for this gene is yfjY [C]

Identifier: 150005694

GI number: 150005694

Start: 4011865

End: 4012326

Strand: Direct

Name: yfjY [C]

Synonym: BVU_3185

Alternate gene names: 150005694

Gene position: 4011865-4012326 (Clockwise)

Preceding gene: 150005693

Following gene: 150005695

Centisome position: 77.7

GC content: 37.01

Gene sequence:

>462_bases
ATGAATAGTAAAATATTAGACATAGATTATACTGTTGGAGAAGTGGAACTCACTTACAAATCCACATCAAAAAGCCGGAA
TAAAATATATAGCTCGGAGGACGCTTATAAATACTTGCTTCCTACCTACAAGGAGGGTACAATTTGTTACAAGGAATATT
TCAAAGTCTTGTTCCTAAACCAATCCAGCCAAGTTTTAGGATATACTCTTATATCAGAGGGAGGAATAACAGACACAACC
GTTGATGTAAGAGTAATTCTACAAGCTGCATTGCTTACCAATTCAGTAGCTCTTATCCTTGCTCATAATCACCCAAGTGG
TAATTTGAAACCAAGCAGGCAGGATATGGAAATTACTAAGCAGGTCAAGAATGCAGCCCAACTTATGAGAATTACAGTAA
TAGACCACCTCATATTAACAGATGCAGGATATTACAGCTTTGCTGATGAAGGACAGTTATAG

Upstream 100 bases:

>100_bases
TCTATGATAGAGTATGCAATTCAATTCTTGTTTATGAATATGGCGACAGACCATTTTAACTGTCCAATTTTTCTTCCACC
ACCACATTAATGTTGATAGA

Downstream 100 bases:

>100_bases
CGTATCATCTTGAAAAGGACATTCAATTTTTAAGTTGGGTGTCCTTACTTACATAAGCTGAACGAACATTCAGCACTTGT
AACCAACTACTAATAATTGT

Product: DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MNSKILDIDYTVGEVELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEGGITDTT
VDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL

Sequences:

>Translated_153_residues
MNSKILDIDYTVGEVELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEGGITDTT
VDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL
>Mature_153_residues
MNSKILDIDYTVGEVELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLNQSSQVLGYTLISEGGITDTT
VDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITKQVKNAAQLMRITVIDHLILTDAGYYSFADEGQL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=103, Percent_Identity=43.6893203883495, Blast_Score=90, Evalue=8e-20,
Organism=Escherichia coli, GI2367100, Length=103, Percent_Identity=40.7766990291262, Blast_Score=83, Evalue=9e-18,
Organism=Escherichia coli, GI1788312, Length=103, Percent_Identity=40.7766990291262, Blast_Score=82, Evalue=1e-17,
Organism=Escherichia coli, GI87082300, Length=103, Percent_Identity=36.8932038834951, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17182; Mature: 17182

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSKILDIDYTVGEVELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLN
CCCEEEEEEEEECEEEEEEECCCCCHHHCCCCCCCEEEECCCCCCCCEEHHHHEEEEEEC
QSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITK
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHH
QVKNAAQLMRITVIDHLILTDAGYYSFADEGQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSKILDIDYTVGEVELTYKSTSKSRNKIYSSEDAYKYLLPTYKEGTICYKEYFKVLFLN
CCCEEEEEEEEECEEEEEEECCCCCHHHCCCCCCCEEEECCCCCCCCEEHHHHEEEEEEC
QSSQVLGYTLISEGGITDTTVDVRVILQAALLTNSVALILAHNHPSGNLKPSRQDMEITK
CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCHHHHHHH
QVKNAAQLMRITVIDHLILTDAGYYSFADEGQL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA