| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150005651
Identifier: 150005651
GI number: 150005651
Start: 3961560
End: 3963173
Strand: Direct
Name: 150005651
Synonym: BVU_3141
Alternate gene names: NA
Gene position: 3961560-3963173 (Clockwise)
Preceding gene: 150005650
Following gene: 150005653
Centisome position: 76.73
GC content: 46.34
Gene sequence:
>1614_bases ATGACAAAGATACATTTTCGTCCTTACAATCCCAACCAAACAGTGCTTTTTCCTCCAAGAATTGACGAGGATATTGCAGA GCATGATCCAGTTCGGATGGTTGACGCTCTGGTTGAGAGCCTGAACCTTGAAAGTTTCAGGAAGTTGTATAAGGAATGCG GGCGCAGCCCTTACCATCCCAGGATGATGCTCAAGGTCATTCTGTATGCCTATATGAACAACATCTACTCCTGCCGGAAA ATCGAAAAGCTCCTTCACCGTGACATCCATTATATCTGGCTTGCCGGATATGAGAAACCGGATTTCATCACCATCAACCG TTTCCGCAACCGGGTGAAGAATGAAATCAACGAGGTGTTTACCCAAACCGTACTCCTTCTCTCTTCCAAAGGCTTCATCA GCTTGAATGTGGAATACATTGACGGGACAAAGATTGAGTCCAAAGCCAATAAGTATACTTTCGTCTGGCGGAAAACGGTT GAGCGGAACCGTGAACGCCTGATGAAGAAGATACATATCCTGCTAGGGCAGATAGACAATGTCATCGCCCAGGAGAACTC ATCGGAAAGCAATGAGGAGATTGAGTTCACTCCGGTCATGCTGACTGAAATGGCGGGAGAATTGCGTCAAGCACTCGAAC AGGTTCCTGAACCCTCCACGAAAGAGGAAAAGACTGCGTTGAAAAAGAAACGCAAACAGCTGAAGGAGTTGGAAGAGCAC AGGGACAAGCTACAGGAATACGACAACCGTCTGGACACGCTGCAGGACAGGAATTCCTATTCCAAAACGGACAATGACGC TACTTTCATGAGAATGAAGGAGGATGCCATGCGTAACGGCCAGACAAAGCCCGGTTACAACCTCCAGATCGGCACCGGGA ACCAGTTCATTACCGACTTTGCACTCTTCCCGAACCCTACGGATACACTGACCCTGATACCTTTCCTGCAATCCTTCTCA AGCAGATATGACAGGCTGGCCCATACGGTGGTTGCCGATTCCGGCTACGGTTCTGAGGAGAATTACCGCTTCATGTCAGA AAACGGTATGGAAGCCTACGTCAAGTACAACTACTTCCACATGGAACAGCGGCCGAGATTCAAACCGGACCCGTTCAAGG CCGAAAACTTCTACTACAATGAAGAACAAGACTTTTGTATCTGCCCCATGGGACAGAAGATGCAAAGGATAGGGACTAGA CATGTGAAAACAGCATCCGGATATGTCAGCGAAAATGCCAGGTACAGAGCCATCAGATGTGAAGGCTGTCCGCTAAGATG CCGATGTTTTAAAGCAAAGGGGAACAGAACGATAGAGTTGAATCACAGACTCAGAAAATACAAGCAAAAAGCCAAAGAGT TGCTCTGCTCAGAGGAAGGGCTGAAACACAGAGGACAGAGATGCATAGAACCGGAAGCCGTGTTCGGACAAATGAAAAAC AATATGAATTACAAACGTTTCCGCCATTTTGGAAAGGATAAGGTCTTCATGGACTTTGCCTTCTTTGCCATTGCCTTCAA TATAAAAAAGATGTGTGCAAAAATGACTAAAGAAGGTATGGATTGGCTGATTAGACCGTTTTATGAGCTTACAGTTGTTC TATTTAGATGTTGA
Upstream 100 bases:
>100_bases TGCGCACCTTCTTTTTTTATGCACAAAGCCCCGACTTTCACAAGCAGGGGCTTTGTTATTACCTAAAGATTTTGTATCTT TAAGCATAACATTTTATACT
Downstream 100 bases:
>100_bases GAACGCATAAATCAAAGAAATCCTCAAAATATCGCAGCTTAAAAAAATGAGTCGATTTTTATAGTCAATGAAAAAAAAGA AGGCGCATCGTGTATTACGA
Product: transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase Is4 Family Protein; ISCpe5 Transposase; Transposase IS4 Family; ISCps6 Transposase; ISNCY Family Transposase; Transposase Is4 Family; ISPpu20 Transposase; Transposase ISNCY Family Protein; LOW QUALITY PROTEIN ISNCY Family Transposase
Number of amino acids: Translated: 537; Mature: 536
Protein sequence:
>537_residues MTKIHFRPYNPNQTVLFPPRIDEDIAEHDPVRMVDALVESLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPVMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTGNQFITDFALFPNPTDTLTLIPFLQSFS SRYDRLAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEQDFCICPMGQKMQRIGTR HVKTASGYVSENARYRAIRCEGCPLRCRCFKAKGNRTIELNHRLRKYKQKAKELLCSEEGLKHRGQRCIEPEAVFGQMKN NMNYKRFRHFGKDKVFMDFAFFAIAFNIKKMCAKMTKEGMDWLIRPFYELTVVLFRC
Sequences:
>Translated_537_residues MTKIHFRPYNPNQTVLFPPRIDEDIAEHDPVRMVDALVESLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRK IEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTV ERNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPVMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTGNQFITDFALFPNPTDTLTLIPFLQSFS SRYDRLAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEQDFCICPMGQKMQRIGTR HVKTASGYVSENARYRAIRCEGCPLRCRCFKAKGNRTIELNHRLRKYKQKAKELLCSEEGLKHRGQRCIEPEAVFGQMKN NMNYKRFRHFGKDKVFMDFAFFAIAFNIKKMCAKMTKEGMDWLIRPFYELTVVLFRC >Mature_536_residues TKIHFRPYNPNQTVLFPPRIDEDIAEHDPVRMVDALVESLNLESFRKLYKECGRSPYHPRMMLKVILYAYMNNIYSCRKI EKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVFTQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVE RNRERLMKKIHILLGQIDNVIAQENSSESNEEIEFTPVMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEHR DKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTGNQFITDFALFPNPTDTLTLIPFLQSFSS RYDRLAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFHMEQRPRFKPDPFKAENFYYNEEQDFCICPMGQKMQRIGTRH VKTASGYVSENARYRAIRCEGCPLRCRCFKAKGNRTIELNHRLRKYKQKAKELLCSEEGLKHRGQRCIEPEAVFGQMKNN MNYKRFRHFGKDKVFMDFAFFAIAFNIKKMCAKMTKEGMDWLIRPFYELTVVLFRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63665; Mature: 63534
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIHFRPYNPNQTVLFPPRIDEDIAEHDPVRMVDALVESLNLESFRKLYKECGRSPYHP CCEEEEEECCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH RMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPVMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTGNQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHE ALFPNPTDTLTLIPFLQSFSSRYDRLAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEQDFCICPMGQKMQRIGTRHVKTASGYVSENARYRAIRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHHHHCHHHHCCCCCCCCCCCCEEEEEE EGCPLRCRCFKAKGNRTIELNHRLRKYKQKAKELLCSEEGLKHRGQRCIEPEAVFGQMKN CCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFFAIAFNIKKMCAKMTKEGMDWLIRPFYELTVVLFRC CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TKIHFRPYNPNQTVLFPPRIDEDIAEHDPVRMVDALVESLNLESFRKLYKECGRSPYHP CEEEEEECCCCCEEEECCCCCHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH RMMLKVILYAYMNNIYSCRKIEKLLHRDIHYIWLAGYEKPDFITINRFRNRVKNEINEVF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHHHHHHHHHH TQTVLLLSSKGFISLNVEYIDGTKIESKANKYTFVWRKTVERNRERLMKKIHILLGQIDN HHHHHHHCCCCEEEEEEEEECCCEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH VIAQENSSESNEEIEFTPVMLTEMAGELRQALEQVPEPSTKEEKTALKKKRKQLKELEEH HHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH RDKLQEYDNRLDTLQDRNSYSKTDNDATFMRMKEDAMRNGQTKPGYNLQIGTGNQFITDF HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHE ALFPNPTDTLTLIPFLQSFSSRYDRLAHTVVADSGYGSEENYRFMSENGMEAYVKYNYFH EECCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCCEEEEEEEEEE MEQRPRFKPDPFKAENFYYNEEQDFCICPMGQKMQRIGTRHVKTASGYVSENARYRAIRC ECCCCCCCCCCCCCCCCEECCCCCEEECCCCHHHHHHCHHHHCCCCCCCCCCCCEEEEEE EGCPLRCRCFKAKGNRTIELNHRLRKYKQKAKELLCSEEGLKHRGQRCIEPEAVFGQMKN CCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NMNYKRFRHFGKDKVFMDFAFFAIAFNIKKMCAKMTKEGMDWLIRPFYELTVVLFRC CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA