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The map label for this gene is ybjE [H]

Identifier: 150005564

GI number: 150005564

Start: 3859308

End: 3859928

Strand: Reverse

Name: ybjE [H]

Synonym: BVU_3049

Alternate gene names: 150005564

Gene position: 3859928-3859308 (Counterclockwise)

Preceding gene: 150005565

Following gene: 150005560

Centisome position: 74.76

GC content: 45.57

Gene sequence:

>621_bases
ATGAAAGGCAGTTTGGTTGTTGTCGCATTTTTTTGTGCAGGATGTATGATTGGAGCTGTCAATAATTTCCAGTATGACAT
GCACTCTGTTTCCATGTATGTGCTTTATGCACTGATGCTCCAAGTAGGAATCAGCATAGGCAGCAATAAGAAATTGAAAG
AACTGATTAAAAGCTTACGGCTGAAAATGCTCCTGGTACCGATGGCTACCATTGCGGGAACCTTGCTTTTCTCGGCACTG
GCCAGCCTGCTATTAAGCCAATGGAGTGTATTCGACTGTATGGCGGTGGGCAGCGGCTTTGCCTATTATTCACTATCCTC
CATCCTGATCACACAGTTCAAGGAACCGTCTATCGGATTACAACTGGCCACCGAATTGGGAACCATTGCGTTACTGGCCA
ATATTTTCCGAGAGATGATGGCATTGCTCGGTGCTCCGCTCATACGGAAATATTTCGGACAGCTGGCTCCTATCTCGGCT
GCCGGAGTGAACTCGATGGATGTATTGCTGCCATCCATCACACGTTATTCGGGAAAAGACATGATTCCCCTGGCCATATT
CCACGGAATACTGATTGATATGAGTGTTCCTGTTTTCGTATCCTTCTTCTGTAATTTATAA

Upstream 100 bases:

>100_bases
TCGGATGGCAGGCGGCTATATTGGCTACATTAAGCATTTTGGGCAGTATGCTAGCTTCTTTTCTGGTATTTCATCTGTTT
TTTAAGAAAGGAGGCAAACA

Downstream 100 bases:

>100_bases
AAAAAGAGAAGCCCGCTTGATTGGTTAAGCGGGCTTCTTTTTCATATATAATATAGGCGGGAATTATTTCGCAACCTTTT
CCAGTTTCTTCATGATAGAG

Product: putative surface protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKGSLVVVAFFCAGCMIGAVNNFQYDMHSVSMYVLYALMLQVGISIGSNKKLKELIKSLRLKMLLVPMATIAGTLLFSAL
ASLLLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPSIGLQLATELGTIALLANIFREMMALLGAPLIRKYFGQLAPISA
AGVNSMDVLLPSITRYSGKDMIPLAIFHGILIDMSVPVFVSFFCNL

Sequences:

>Translated_206_residues
MKGSLVVVAFFCAGCMIGAVNNFQYDMHSVSMYVLYALMLQVGISIGSNKKLKELIKSLRLKMLLVPMATIAGTLLFSAL
ASLLLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPSIGLQLATELGTIALLANIFREMMALLGAPLIRKYFGQLAPISA
AGVNSMDVLLPSITRYSGKDMIPLAIFHGILIDMSVPVFVSFFCNL
>Mature_206_residues
MKGSLVVVAFFCAGCMIGAVNNFQYDMHSVSMYVLYALMLQVGISIGSNKKLKELIKSLRLKMLLVPMATIAGTLLFSAL
ASLLLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPSIGLQLATELGTIALLANIFREMMALLGAPLIRKYFGQLAPISA
AGVNSMDVLLPSITRYSGKDMIPLAIFHGILIDMSVPVFVSFFCNL

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1452 [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=183, Percent_Identity=30.0546448087432, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 22329; Mature: 22329

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSLVVVAFFCAGCMIGAVNNFQYDMHSVSMYVLYALMLQVGISIGSNKKLKELIKSLR
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKMLLVPMATIAGTLLFSALASLLLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPSIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
QLATELGTIALLANIFREMMALLGAPLIRKYFGQLAPISAAGVNSMDVLLPSITRYSGKD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
MIPLAIFHGILIDMSVPVFVSFFCNL
CHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGSLVVVAFFCAGCMIGAVNNFQYDMHSVSMYVLYALMLQVGISIGSNKKLKELIKSLR
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKMLLVPMATIAGTLLFSALASLLLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPSIGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHH
QLATELGTIALLANIFREMMALLGAPLIRKYFGQLAPISAAGVNSMDVLLPSITRYSGKD
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
MIPLAIFHGILIDMSVPVFVSFFCNL
CHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]