Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is bdhA [H]
Identifier: 150005531
GI number: 150005531
Start: 3817531
End: 3818706
Strand: Reverse
Name: bdhA [H]
Synonym: BVU_3015
Alternate gene names: 150005531
Gene position: 3818706-3817531 (Counterclockwise)
Preceding gene: 150005535
Following gene: 150005530
Centisome position: 73.96
GC content: 44.56
Gene sequence:
>1176_bases ATGAACAATTTTGTATTTTACAGCCCTACCGAGTTTGTATTTGGCAAGGATACAGATATCCAAACCGGTACTCTTGCTAA AAAGTATAACGCCCGGAAGGCAATGATTGTTTACGGTGGAGGCTCTATTATTCGCAGCGGATTACTGCAACGCATAGAAG ATTCTCTGCAACAGGCAGGAGTGGATTATGTAAAATTAGGAGGCGTACAACCTAATCCTACTGACCCGAAAGTTTACGAA GGCATTGAACTGGCGCGCAAAGAAGGCGTGGACTTTATGCTTCCCGTAGGGGGAGGCTCTGTCATTGACACTGCAAAAGC CATTGCGGCAGGAGTGCCCTACGAAGGTGATTTTTGGGATTTCTATATAGGAAAAGCCAAAGTGAAGAAGGCCTTAAAAG TGGGTGTGGTACTTACTATTCCCGCTGCCGGCAGCGAAGGTTCGGGCAATACGGTGATTACCAAACTGGAAGGTCTGCAA AAACTAAGTTTGCGTGTACCGGAATTACTACGGCCTGTTTTTGCTGTGATGAATCCGGAGCTGACCTATACTCTCCCCCC CTACCAGACAGCTTGTGGCATTGCCGATATGATGGTACACATTATGGAACGTTATTTTACCAACACTCCCGATGTAGAAA TCAGTGACCGGCTGTGTGAAGGGACTTTGATGGCTATCATCAAAGAAGCATATAAAGTGAAGCAGAACCCGAACGATTAC GAAGCACGCGCCAATATCATGTGGTGTGGGACAATTGCCCATAACGGTACTTGCGGAGTAGGTTGTGAGGAAGACTGGGC ATCACATTTTCTGGAACATGAAATCAGTGCTGTATATAATGTGACACATGGAGCAGGACTAGCAGTAATCGTACCTGCAT GGATGACATTCATGGCAGAACATAACCCGAAAAAGATTGCCCGGTTTGCAAACCGCGTTTTCGGAGTTCCCGAGAATGAG GATTTGGAAGAAATGGCACTTGCCGGCATATCACGATTGAAGCATTTTTTCAGATACATGGGCCTGCCGGTCAATTTCAA AGAATTGGGTATAGAACATCCTGATATTGAACTGCTAGTGAAAAAACTGCATGAAAACAAAGGTGAATTAGTAGGTAATT ATGTAAAACTGAACAAAGAATACAGTAAAGAGATATTCGAACTAGCCTGCAAATAA
Upstream 100 bases:
>100_bases GTCCGTTTTCATCTTTTTACTAAATTTAGGCGGCAAAGGTAATATATTTCCTTAACTTTGTTTTGGTTTCAAACAACAAA ATAATATAAGGAGTAAGCAA
Downstream 100 bases:
>100_bases CCCGCACAGCCCAACTGTTCTAAAATATAGGCATCCGGTTTATCTGCCTTTATTTCATTCAGAACCGTAAAGCTCCTAAA GTATTCTATTTTCCAGACGC
Product: Fe-dependent alcohol dehydrogenase family oxidoreductase
Products: NA
Alternate protein names: BDH I [H]
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MNNFVFYSPTEFVFGKDTDIQTGTLAKKYNARKAMIVYGGGSIIRSGLLQRIEDSLQQAGVDYVKLGGVQPNPTDPKVYE GIELARKEGVDFMLPVGGGSVIDTAKAIAAGVPYEGDFWDFYIGKAKVKKALKVGVVLTIPAAGSEGSGNTVITKLEGLQ KLSLRVPELLRPVFAVMNPELTYTLPPYQTACGIADMMVHIMERYFTNTPDVEISDRLCEGTLMAIIKEAYKVKQNPNDY EARANIMWCGTIAHNGTCGVGCEEDWASHFLEHEISAVYNVTHGAGLAVIVPAWMTFMAEHNPKKIARFANRVFGVPENE DLEEMALAGISRLKHFFRYMGLPVNFKELGIEHPDIELLVKKLHENKGELVGNYVKLNKEYSKEIFELACK
Sequences:
>Translated_391_residues MNNFVFYSPTEFVFGKDTDIQTGTLAKKYNARKAMIVYGGGSIIRSGLLQRIEDSLQQAGVDYVKLGGVQPNPTDPKVYE GIELARKEGVDFMLPVGGGSVIDTAKAIAAGVPYEGDFWDFYIGKAKVKKALKVGVVLTIPAAGSEGSGNTVITKLEGLQ KLSLRVPELLRPVFAVMNPELTYTLPPYQTACGIADMMVHIMERYFTNTPDVEISDRLCEGTLMAIIKEAYKVKQNPNDY EARANIMWCGTIAHNGTCGVGCEEDWASHFLEHEISAVYNVTHGAGLAVIVPAWMTFMAEHNPKKIARFANRVFGVPENE DLEEMALAGISRLKHFFRYMGLPVNFKELGIEHPDIELLVKKLHENKGELVGNYVKLNKEYSKEIFELACK >Mature_391_residues MNNFVFYSPTEFVFGKDTDIQTGTLAKKYNARKAMIVYGGGSIIRSGLLQRIEDSLQQAGVDYVKLGGVQPNPTDPKVYE GIELARKEGVDFMLPVGGGSVIDTAKAIAAGVPYEGDFWDFYIGKAKVKKALKVGVVLTIPAAGSEGSGNTVITKLEGLQ KLSLRVPELLRPVFAVMNPELTYTLPPYQTACGIADMMVHIMERYFTNTPDVEISDRLCEGTLMAIIKEAYKVKQNPNDY EARANIMWCGTIAHNGTCGVGCEEDWASHFLEHEISAVYNVTHGAGLAVIVPAWMTFMAEHNPKKIARFANRVFGVPENE DLEEMALAGISRLKHFFRYMGLPVNFKELGIEHPDIELLVKKLHENKGELVGNYVKLNKEYSKEIFELACK
Specific function: Unknown
COG id: COG1979
COG function: function code C; Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iron-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=350, Percent_Identity=25.7142857142857, Blast_Score=79, Evalue=8e-15, Organism=Escherichia coli, GI1789386, Length=392, Percent_Identity=35.969387755102, Blast_Score=269, Evalue=2e-73, Organism=Escherichia coli, GI1789163, Length=338, Percent_Identity=26.9230769230769, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI48994951, Length=366, Percent_Identity=23.7704918032787, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787493, Length=361, Percent_Identity=25.7617728531856, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17537053, Length=413, Percent_Identity=23.4866828087167, Blast_Score=82, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6321181, Length=384, Percent_Identity=27.6041666666667, Blast_Score=112, Evalue=1e-25, Organism=Drosophila melanogaster, GI24657991, Length=396, Percent_Identity=23.2323232323232, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 [H]
Pfam domain/function: PF00465 Fe-ADH [H]
EC number: 1.1.-.- [C]
Molecular weight: Translated: 43297; Mature: 43297
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNFVFYSPTEFVFGKDTDIQTGTLAKKYNARKAMIVYGGGSIIRSGLLQRIEDSLQQAG CCCCEEECCCCEEECCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC VDYVKLGGVQPNPTDPKVYEGIELARKEGVDFMLPVGGGSVIDTAKAIAAGVPYEGDFWD CCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCE FYIGKAKVKKALKVGVVLTIPAAGSEGSGNTVITKLEGLQKLSLRVPELLRPVFAVMNPE EECCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC LTYTLPPYQTACGIADMMVHIMERYFTNTPDVEISDRLCEGTLMAIIKEAYKVKQNPNDY EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EARANIMWCGTIAHNGTCGVGCEEDWASHFLEHEISAVYNVTHGAGLAVIVPAWMTFMAE HHEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC HNPKKIARFANRVFGVPENEDLEEMALAGISRLKHFFRYMGLPVNFKELGIEHPDIELLV CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHH KKLHENKGELVGNYVKLNKEYSKEIFELACK HHHHCCCCHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MNNFVFYSPTEFVFGKDTDIQTGTLAKKYNARKAMIVYGGGSIIRSGLLQRIEDSLQQAG CCCCEEECCCCEEECCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCC VDYVKLGGVQPNPTDPKVYEGIELARKEGVDFMLPVGGGSVIDTAKAIAAGVPYEGDFWD CCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCE FYIGKAKVKKALKVGVVLTIPAAGSEGSGNTVITKLEGLQKLSLRVPELLRPVFAVMNPE EECCHHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCC LTYTLPPYQTACGIADMMVHIMERYFTNTPDVEISDRLCEGTLMAIIKEAYKVKQNPNDY EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH EARANIMWCGTIAHNGTCGVGCEEDWASHFLEHEISAVYNVTHGAGLAVIVPAWMTFMAE HHEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHC HNPKKIARFANRVFGVPENEDLEEMALAGISRLKHFFRYMGLPVNFKELGIEHPDIELLV CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHH KKLHENKGELVGNYVKLNKEYSKEIFELACK HHHHCCCCHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1385386; 11466286; 1809209 [H]