Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005480
Identifier: 150005480
GI number: 150005480
Start: 3759892
End: 3760548
Strand: Reverse
Name: 150005480
Synonym: BVU_2963
Alternate gene names: NA
Gene position: 3760548-3759892 (Counterclockwise)
Preceding gene: 150005485
Following gene: 150005479
Centisome position: 72.83
GC content: 54.95
Gene sequence:
>657_bases ATGAACCAATTTAAAATGTCACTGTTTCTGCCACCGATATCACCGGTAAAGGACAGTGCCACCGGACGAACCGTCCAGCC GCCCACCTTAACGCCCTACAAGGAAATAACCTTACAGGAAGTGTACAAACTGATCACATCCAGCGAACGCCTGAAAACAC TGACCGAGACCGTGCGCCGGGCAGCGGAAAACGGGGATGAAAAAGCCTATCGTATGCTCAAGCAGCAGACACTGCCCTAC GTTACCCCCTGCGGTGTCTTTTCCTACCGCAAAAGCGACAGCCTGACCGGACCGTCGGGCTTGATTGTGGTGGACATAGA CCATCTTGATTCCCGTGGGGAAGCGGAAAAGCTGAAAAGACAACTGTTCGACGACCGCCTCCTGCGCCCTGTACTGGCAT TCACCAGCCCCGGCGGACGCGGAGTAAAAGCGTTCATCCCCTACGACCTGGCACGCATACCCGACACCAGACAGAATACC TCCGAAAACATCCACTGGGCGATGAACTACGTACAAGCAATCTATGACAGCCACCCGGACGGGGAAGATAAGAAAACGAG CCGCTCCGGCAAAGGCGTGGACCGTTCCGGCAAGGACCTGGTACGGGCCTGTTTCCTCTCGTATGACGAGGAAGCATTGA TACGCCGGGAAATTTAA
Upstream 100 bases:
>100_bases AACACACGTATCTCGGTTATTATATCGAACTTTGTAACATTGAAAACCAATAACCTGATTCATAAATATCAGGGCTTGCA AACTTAATAAATAAAAACGA
Downstream 100 bases:
>100_bases GAAGAATAGAAAAGCATACTCAAAAGAATGCCGGACAAAATTTAAACAGGCACTCAAAAAACAACAAATATCATGAACAT GAACAATCCTTTAGAAAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNQFKMSLFLPPISPVKDSATGRTVQPPTLTPYKEITLQEVYKLITSSERLKTLTETVRRAAENGDEKAYRMLKQQTLPY VTPCGVFSYRKSDSLTGPSGLIVVDIDHLDSRGEAEKLKRQLFDDRLLRPVLAFTSPGGRGVKAFIPYDLARIPDTRQNT SENIHWAMNYVQAIYDSHPDGEDKKTSRSGKGVDRSGKDLVRACFLSYDEEALIRREI
Sequences:
>Translated_218_residues MNQFKMSLFLPPISPVKDSATGRTVQPPTLTPYKEITLQEVYKLITSSERLKTLTETVRRAAENGDEKAYRMLKQQTLPY VTPCGVFSYRKSDSLTGPSGLIVVDIDHLDSRGEAEKLKRQLFDDRLLRPVLAFTSPGGRGVKAFIPYDLARIPDTRQNT SENIHWAMNYVQAIYDSHPDGEDKKTSRSGKGVDRSGKDLVRACFLSYDEEALIRREI >Mature_218_residues MNQFKMSLFLPPISPVKDSATGRTVQPPTLTPYKEITLQEVYKLITSSERLKTLTETVRRAAENGDEKAYRMLKQQTLPY VTPCGVFSYRKSDSLTGPSGLIVVDIDHLDSRGEAEKLKRQLFDDRLLRPVLAFTSPGGRGVKAFIPYDLARIPDTRQNT SENIHWAMNYVQAIYDSHPDGEDKKTSRSGKGVDRSGKDLVRACFLSYDEEALIRREI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24657; Mature: 24657
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQFKMSLFLPPISPVKDSATGRTVQPPTLTPYKEITLQEVYKLITSSERLKTLTETVRR CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH AAENGDEKAYRMLKQQTLPYVTPCGVFSYRKSDSLTGPSGLIVVDIDHLDSRGEAEKLKR HHCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH QLFDDRLLRPVLAFTSPGGRGVKAFIPYDLARIPDTRQNTSENIHWAMNYVQAIYDSHPD HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC GEDKKTSRSGKGVDRSGKDLVRACFLSYDEEALIRREI CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure MNQFKMSLFLPPISPVKDSATGRTVQPPTLTPYKEITLQEVYKLITSSERLKTLTETVRR CCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHH AAENGDEKAYRMLKQQTLPYVTPCGVFSYRKSDSLTGPSGLIVVDIDHLDSRGEAEKLKR HHCCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH QLFDDRLLRPVLAFTSPGGRGVKAFIPYDLARIPDTRQNTSENIHWAMNYVQAIYDSHPD HHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC GEDKKTSRSGKGVDRSGKDLVRACFLSYDEEALIRREI CCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA