Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is sstT [H]
Identifier: 150005318
GI number: 150005318
Start: 3564532
End: 3565710
Strand: Reverse
Name: sstT [H]
Synonym: BVU_2794
Alternate gene names: 150005318
Gene position: 3565710-3564532 (Counterclockwise)
Preceding gene: 150005322
Following gene: 150005314
Centisome position: 69.06
GC content: 45.38
Gene sequence:
>1179_bases ATGAAGAGGTTAAAAATCGGCTTATTAGCCCGAATTATCATCGCCATCACATTGGGTATAGGATTCGGAAACGTTCTTCC CGGCGAATTGGTCAGAGTATTTGTGACTTTCAACGGAATCTTCAGCGAATTTTTGGGTTTCATCATTCCACTGATTATTC TCGGACTGGTCACTCCTGCCATTGCCGATATCGGTAAGGAGGCAGGAAAGATGCTGGTGATAACGACATTGGTAGCATAC AGCGCCACGTTGTTCTCCGGTTTCCTGTCTTATTTCACCGGAGTGACTTTTTTCCCTTCCATGATTACTCCGGGAGCACC GATAGAACAAATCAGCGAGGCACATGATATTTCTCCATTCTTCACTGTAGCCATCCCCCCGGTGATGAATGTGATGACTT CCTTGATTTTAGCCTTCACACTAGGTCTGGGCATCGCACATTTGGATAGTACAGCGCTGAAAAACGTATGTAACGATTTC AAAGAAATCATAGTCAAAACCATCCAGACGGTGATTCTGCCCCTACTGCCTATCTATATATTCGGTATATTCCTGAATAT GACCCATTCCGGACAGGTATATAACATTCTGATGGTATTTATCAAGATCATCGGAGTCATTTTCCTGCTTCACATCTTCC TGTTGGTTTTTCAATATACCATTGCAGCGCTGTTTGTACATCGGAATCCGTTCAAACTACTGGGAAAGATGATGCCTGCC TATTTCACAGCATTGGGCACACAGTCATCGGCAGCCACCATTCCGGTGACTTTGCGACAGACTGTCAAGAATGGGGTCAC GGAGGATATAGCCGGATTTGTCATTCCGCTATGTGCCACAATTCATCTGTCGGGAAGCACGTTGAAGATTGTTGCTTGCG CACTGGCACTGATGATTATGCAAGGAATGCCATTTGATTTCCCCATGTTTGCAGGATTCATCTTTATGCTGGGAATCACG ATGGTAGCTGCACCGGGAGTACCGGGAGGAGCCATCATGGCTGCATTGGGGATCCTGTCTTCCATGCTGGGATTCGGAGA AAGTGAACAGGCTTTGATGATAGCACTTTACATTGCCATGGATAGTTTCGGTACTGCTTGTAATGTGACGGGCGATGGGG CTATCGCATTGATTATTGATAAGTTTTTCGGAAAGAAAAATCTCCGGTCCATACAATAA
Upstream 100 bases:
>100_bases TATCTGCCTTTTCCATAAATTATTCTTTTTATATTTAACAATTTGATAGGTTATTTGTTCAATAATTCTATCTTTGCAAT TTGAATAATAACACATTATC
Downstream 100 bases:
>100_bases ACAGGAAAAATATTCCCGAATCAGATAAAGTCAGGAAACTCTGTAACCCATTCATGAAAAGTTGCCAGGCTGATTTATGA CGTGTATGATAAAAAAGGTA
Product: Na+/H+-dicarboxylate symporter
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MKRLKIGLLARIIIAITLGIGFGNVLPGELVRVFVTFNGIFSEFLGFIIPLIILGLVTPAIADIGKEAGKMLVITTLVAY SATLFSGFLSYFTGVTFFPSMITPGAPIEQISEAHDISPFFTVAIPPVMNVMTSLILAFTLGLGIAHLDSTALKNVCNDF KEIIVKTIQTVILPLLPIYIFGIFLNMTHSGQVYNILMVFIKIIGVIFLLHIFLLVFQYTIAALFVHRNPFKLLGKMMPA YFTALGTQSSAATIPVTLRQTVKNGVTEDIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPFDFPMFAGFIFMLGIT MVAAPGVPGGAIMAALGILSSMLGFGESEQALMIALYIAMDSFGTACNVTGDGAIALIIDKFFGKKNLRSIQ
Sequences:
>Translated_392_residues MKRLKIGLLARIIIAITLGIGFGNVLPGELVRVFVTFNGIFSEFLGFIIPLIILGLVTPAIADIGKEAGKMLVITTLVAY SATLFSGFLSYFTGVTFFPSMITPGAPIEQISEAHDISPFFTVAIPPVMNVMTSLILAFTLGLGIAHLDSTALKNVCNDF KEIIVKTIQTVILPLLPIYIFGIFLNMTHSGQVYNILMVFIKIIGVIFLLHIFLLVFQYTIAALFVHRNPFKLLGKMMPA YFTALGTQSSAATIPVTLRQTVKNGVTEDIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPFDFPMFAGFIFMLGIT MVAAPGVPGGAIMAALGILSSMLGFGESEQALMIALYIAMDSFGTACNVTGDGAIALIIDKFFGKKNLRSIQ >Mature_392_residues MKRLKIGLLARIIIAITLGIGFGNVLPGELVRVFVTFNGIFSEFLGFIIPLIILGLVTPAIADIGKEAGKMLVITTLVAY SATLFSGFLSYFTGVTFFPSMITPGAPIEQISEAHDISPFFTVAIPPVMNVMTSLILAFTLGLGIAHLDSTALKNVCNDF KEIIVKTIQTVILPLLPIYIFGIFLNMTHSGQVYNILMVFIKIIGVIFLLHIFLLVFQYTIAALFVHRNPFKLLGKMMPA YFTALGTQSSAATIPVTLRQTVKNGVTEDIAGFVIPLCATIHLSGSTLKIVACALALMIMQGMPFDFPMFAGFIFMLGIT MVAAPGVPGGAIMAALGILSSMLGFGESEQALMIALYIAMDSFGTACNVTGDGAIALIIDKFFGKKNLRSIQ
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI169790839, Length=294, Percent_Identity=27.2108843537415, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI4827012, Length=168, Percent_Identity=32.7380952380952, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI40254478, Length=147, Percent_Identity=31.2925170068027, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI223468564, Length=170, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI223468566, Length=170, Percent_Identity=26.4705882352941, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI194239697, Length=273, Percent_Identity=28.2051282051282, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI66773030, Length=172, Percent_Identity=32.5581395348837, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI5032093, Length=172, Percent_Identity=27.906976744186, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI21314632, Length=174, Percent_Identity=29.8850574712644, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1789473, Length=357, Percent_Identity=26.3305322128852, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71996953, Length=302, Percent_Identity=25.4966887417219, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71983099, Length=251, Percent_Identity=25.8964143426295, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983106, Length=251, Percent_Identity=25.8964143426295, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17537407, Length=146, Percent_Identity=28.0821917808219, Blast_Score=65, Evalue=6e-11, Organism=Drosophila melanogaster, GI24583025, Length=180, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI17137668, Length=180, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24583023, Length=180, Percent_Identity=30.5555555555556, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 42069; Mature: 42069
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLKIGLLARIIIAITLGIGFGNVLPGELVRVFVTFNGIFSEFLGFIIPLIILGLVTPA CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADIGKEAGKMLVITTLVAYSATLFSGFLSYFTGVTFFPSMITPGAPIEQISEAHDISPF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH FTVAIPPVMNVMTSLILAFTLGLGIAHLDSTALKNVCNDFKEIIVKTIQTVILPLLPIYI HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIFLNMTHSGQVYNILMVFIKIIGVIFLLHIFLLVFQYTIAALFVHRNPFKLLGKMMPA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH YFTALGTQSSAATIPVTLRQTVKNGVTEDIAGFVIPLCATIHLSGSTLKIVACALALMIM HHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QGMPFDFPMFAGFIFMLGITMVAAPGVPGGAIMAALGILSSMLGFGESEQALMIALYIAM HCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DSFGTACNVTGDGAIALIIDKFFGKKNLRSIQ HCCCCEEECCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKRLKIGLLARIIIAITLGIGFGNVLPGELVRVFVTFNGIFSEFLGFIIPLIILGLVTPA CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IADIGKEAGKMLVITTLVAYSATLFSGFLSYFTGVTFFPSMITPGAPIEQISEAHDISPF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCH FTVAIPPVMNVMTSLILAFTLGLGIAHLDSTALKNVCNDFKEIIVKTIQTVILPLLPIYI HEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGIFLNMTHSGQVYNILMVFIKIIGVIFLLHIFLLVFQYTIAALFVHRNPFKLLGKMMPA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH YFTALGTQSSAATIPVTLRQTVKNGVTEDIAGFVIPLCATIHLSGSTLKIVACALALMIM HHHHHCCCCCCCEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QGMPFDFPMFAGFIFMLGITMVAAPGVPGGAIMAALGILSSMLGFGESEQALMIALYIAM HCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH DSFGTACNVTGDGAIALIIDKFFGKKNLRSIQ HCCCCEEECCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA