Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005298
Identifier: 150005298
GI number: 150005298
Start: 3536427
End: 3538046
Strand: Reverse
Name: 150005298
Synonym: BVU_2770
Alternate gene names: NA
Gene position: 3538046-3536427 (Counterclockwise)
Preceding gene: 150005299
Following gene: 150005297
Centisome position: 68.52
GC content: 44.38
Gene sequence:
>1620_bases ATGAATAAGTTATTTAAAATACACTGGCTTGCTGCTCTATGCGGCCTTACAATGCTCTCGCTAACAGCCTGTAATGACGA TGACAATCCGGAAAACAAATCTCCGGAAGTCAATCCTGATATCAACGTAAATGTAGAGACCTATGCAGGCGGAGAATTGG GTACAACCTTCAACAATTCCGCTTCTGCTTATGAAGATCCTACTCCTGCAACGGAAAATGCAGGTATGACCGACAAATTC AAATATGGGGAATATTTCTTTGAACGTTCTTATACGCAGAATTCCAAACCTTTCAATGGTTTGGGACCGCTTTATATCCG CAATTCATGTATGAACTGCCACCCCGGATACGGTCATGGCAAACGGGTAGACCGTTATCGTGCTGATGACTGGGGAAATG GATATCTACTTGTTGTGACCGATGGAAAGGATAACTACCTAAGTTCTTTAACGGGAATGCCTCAAACCAAAGCTGTAGCC CCTTTCAAAGCACCAATAGATGAAGATAAGATAAAAATAGACTGGCTGCCTTACACAGACGAATGGGGAAATAAATTTCC TGACGGAGAAACATACAGTCTGATCTATCCGGAAGTGACTATTCCTCAAGATGCATACTACGTACCTTTGGAGGCTACTT ATAATCAAGTTGTCACCCCTGTCAACTACTCTGATGTAGTAGTTTTGCTGGAATCTACCATTGGTATCTACGGAACCGGA TTACTAGATGCCATTCCCGATGATTCGTTGAAAGCAGAATATGCACGTCAGGAAAAAGCAGGTGTAAAATTGAATCCAGC CATCTTCGCAAACGGAGAGTGGACTTCACTCTATAAGGGACTTACAGGTAAACAATATCCCAAACGTTATACTTACGCTT TGACCAGATCTTCCATACAGGATGGTCCCGGTGCCAATGCAATCTGGAACATCACCAATGTTACCCGTAGTGACCGCCGT TATCACTACATGACTGACACGTATGCCAAAACAGCCTCCAAAGACCCGGATGTACAAAAAGATTTTTATAACTATTTCCC TGAATGGAAACAGACCGGTAATGTAGAACAAGATATATACAACTATCTGATGAATAAGGAACTTCCGGTGGAAATGACAG ACGAAGATTATGTAAACTTCATGATATGGCACAGAGGACTGGCAGTTCCTGCCGCACGGAATCTGGATGACGAAACAGTT CAGAGAGGTCACAAATTATTCCGTGAAATAGGCTGTGCTACCTGCCATCGTCCGTCATGGACTACAGGAGACGATAATTA TCCCGATCCGAACGGATACTTCAAAGATGGTGACAGCCGTCTGCCACGCCATCCACACCAAACTATCTGGCCATATTCAG ATATGGTTCAGCACCGCCTGGAAATGAAGAACAATATCCGCACGGGATGGTGCCGTACCACTCCTCTTTGGGGACGCGGA CTTTCCTTAATCTGTGCCGGACACAGCGACCGTTTGCATGACTGTCGTGCACGTAATGTCATTGAAGCCATTATGTGGCA TGGAGCTTCAAATAGTGACGCACGCTGGAGCATTGACAAGTTCCGCGAACTCAGTAAAGAAGATCGTGACGCCATCGTCA AATTTATTGATGCCATTTAA
Upstream 100 bases:
>100_bases CTACAACAGACATGATAGTGAAAAAGACCGGGGGAGGACAACCTTATGTAGATTCTTTGGTATATAAATTTGAAAAGTAA CTAACTTTAAACATTCTTAT
Downstream 100 bases:
>100_bases ACAATGAAACAGATTGTCTCCCTCCTGAATCCTATCACCAATAATATGACAGGACATTCAGGGGGATGAGACAAATTCAA GATTCACCTTCTGGTTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Exported Protein; Signal Peptide
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MNKLFKIHWLAALCGLTMLSLTACNDDDNPENKSPEVNPDINVNVETYAGGELGTTFNNSASAYEDPTPATENAGMTDKF KYGEYFFERSYTQNSKPFNGLGPLYIRNSCMNCHPGYGHGKRVDRYRADDWGNGYLLVVTDGKDNYLSSLTGMPQTKAVA PFKAPIDEDKIKIDWLPYTDEWGNKFPDGETYSLIYPEVTIPQDAYYVPLEATYNQVVTPVNYSDVVVLLESTIGIYGTG LLDAIPDDSLKAEYARQEKAGVKLNPAIFANGEWTSLYKGLTGKQYPKRYTYALTRSSIQDGPGANAIWNITNVTRSDRR YHYMTDTYAKTASKDPDVQKDFYNYFPEWKQTGNVEQDIYNYLMNKELPVEMTDEDYVNFMIWHRGLAVPAARNLDDETV QRGHKLFREIGCATCHRPSWTTGDDNYPDPNGYFKDGDSRLPRHPHQTIWPYSDMVQHRLEMKNNIRTGWCRTTPLWGRG LSLICAGHSDRLHDCRARNVIEAIMWHGASNSDARWSIDKFRELSKEDRDAIVKFIDAI
Sequences:
>Translated_539_residues MNKLFKIHWLAALCGLTMLSLTACNDDDNPENKSPEVNPDINVNVETYAGGELGTTFNNSASAYEDPTPATENAGMTDKF KYGEYFFERSYTQNSKPFNGLGPLYIRNSCMNCHPGYGHGKRVDRYRADDWGNGYLLVVTDGKDNYLSSLTGMPQTKAVA PFKAPIDEDKIKIDWLPYTDEWGNKFPDGETYSLIYPEVTIPQDAYYVPLEATYNQVVTPVNYSDVVVLLESTIGIYGTG LLDAIPDDSLKAEYARQEKAGVKLNPAIFANGEWTSLYKGLTGKQYPKRYTYALTRSSIQDGPGANAIWNITNVTRSDRR YHYMTDTYAKTASKDPDVQKDFYNYFPEWKQTGNVEQDIYNYLMNKELPVEMTDEDYVNFMIWHRGLAVPAARNLDDETV QRGHKLFREIGCATCHRPSWTTGDDNYPDPNGYFKDGDSRLPRHPHQTIWPYSDMVQHRLEMKNNIRTGWCRTTPLWGRG LSLICAGHSDRLHDCRARNVIEAIMWHGASNSDARWSIDKFRELSKEDRDAIVKFIDAI >Mature_539_residues MNKLFKIHWLAALCGLTMLSLTACNDDDNPENKSPEVNPDINVNVETYAGGELGTTFNNSASAYEDPTPATENAGMTDKF KYGEYFFERSYTQNSKPFNGLGPLYIRNSCMNCHPGYGHGKRVDRYRADDWGNGYLLVVTDGKDNYLSSLTGMPQTKAVA PFKAPIDEDKIKIDWLPYTDEWGNKFPDGETYSLIYPEVTIPQDAYYVPLEATYNQVVTPVNYSDVVVLLESTIGIYGTG LLDAIPDDSLKAEYARQEKAGVKLNPAIFANGEWTSLYKGLTGKQYPKRYTYALTRSSIQDGPGANAIWNITNVTRSDRR YHYMTDTYAKTASKDPDVQKDFYNYFPEWKQTGNVEQDIYNYLMNKELPVEMTDEDYVNFMIWHRGLAVPAARNLDDETV QRGHKLFREIGCATCHRPSWTTGDDNYPDPNGYFKDGDSRLPRHPHQTIWPYSDMVQHRLEMKNNIRTGWCRTTPLWGRG LSLICAGHSDRLHDCRARNVIEAIMWHGASNSDARWSIDKFRELSKEDRDAIVKFIDAI
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61447; Mature: 61447
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLFKIHWLAALCGLTMLSLTACNDDDNPENKSPEVNPDINVNVETYAGGELGTTFNNS CCCEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC ASAYEDPTPATENAGMTDKFKYGEYFFERSYTQNSKPFNGLGPLYIRNSCMNCHPGYGHG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC KRVDRYRADDWGNGYLLVVTDGKDNYLSSLTGMPQTKAVAPFKAPIDEDKIKIDWLPYTD CCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCH EWGNKFPDGETYSLIYPEVTIPQDAYYVPLEATYNQVVTPVNYSDVVVLLESTIGIYGTG HHCCCCCCCCEEEEEECCEECCCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCEECC LLDAIPDDSLKAEYARQEKAGVKLNPAIFANGEWTSLYKGLTGKQYPKRYTYALTRSSIQ HHHCCCCCHHHHHHHHHHHCCCEECCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCC DGPGANAIWNITNVTRSDRRYHYMTDTYAKTASKDPDVQKDFYNYFPEWKQTGNVEQDIY CCCCCCEEEEECCCCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHCCCHHHCCCHHHHHH NYLMNKELPVEMTDEDYVNFMIWHRGLAVPAARNLDDETVQRGHKLFREIGCATCHRPSW HHHHCCCCCCEECCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TTGDDNYPDPNGYFKDGDSRLPRHPHQTIWPYSDMVQHRLEMKNNIRTGWCRTTPLWGRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC LSLICAGHSDRLHDCRARNVIEAIMWHGASNSDARWSIDKFRELSKEDRDAIVKFIDAI CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKLFKIHWLAALCGLTMLSLTACNDDDNPENKSPEVNPDINVNVETYAGGELGTTFNNS CCCEEHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC ASAYEDPTPATENAGMTDKFKYGEYFFERSYTQNSKPFNGLGPLYIRNSCMNCHPGYGHG CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC KRVDRYRADDWGNGYLLVVTDGKDNYLSSLTGMPQTKAVAPFKAPIDEDKIKIDWLPYTD CCCCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCH EWGNKFPDGETYSLIYPEVTIPQDAYYVPLEATYNQVVTPVNYSDVVVLLESTIGIYGTG HHCCCCCCCCEEEEEECCEECCCCCEEEEEECCCCCEECCCCCCCEEEEEECCCCCEECC LLDAIPDDSLKAEYARQEKAGVKLNPAIFANGEWTSLYKGLTGKQYPKRYTYALTRSSIQ HHHCCCCCHHHHHHHHHHHCCCEECCEEEECCCHHHHHHCCCCCCCCCHHHHHHHHHCCC DGPGANAIWNITNVTRSDRRYHYMTDTYAKTASKDPDVQKDFYNYFPEWKQTGNVEQDIY CCCCCCEEEEECCCCCCCCEEEEECHHHHHHCCCCCCHHHHHHHHCCCHHHCCCHHHHHH NYLMNKELPVEMTDEDYVNFMIWHRGLAVPAARNLDDETVQRGHKLFREIGCATCHRPSW HHHHCCCCCCEECCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC TTGDDNYPDPNGYFKDGDSRLPRHPHQTIWPYSDMVQHRLEMKNNIRTGWCRTTPLWGRG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCC LSLICAGHSDRLHDCRARNVIEAIMWHGASNSDARWSIDKFRELSKEDRDAIVKFIDAI CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA