Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005284
Identifier: 150005284
GI number: 150005284
Start: 3519399
End: 3521390
Strand: Reverse
Name: 150005284
Synonym: BVU_2756
Alternate gene names: NA
Gene position: 3521390-3519399 (Counterclockwise)
Preceding gene: 150005285
Following gene: 150005283
Centisome position: 68.2
GC content: 51.0
Gene sequence:
>1992_bases ATGAAACAAGAAGAAGAAAAATCGGTTGGATTGCCCGATAACGCGTTCCGACCTCTGAAACCGGGGGAACAATATCACCC CATCATGTCACCAAACAAAAAATATCCCGAAGTAAACCTATGGTCTGTGCTATTGGGTATCGCCATGGCGGTATTATTCT CGGCGGCCGCAGCTTACCTGGGATTAAAAGTGGGACAGGTTTTTGAAGCCGCCATCCCTATCGCCATCATCGCCGTAGGT GTATCGGGAGCCGCCAAGCGTAAAAACGCGTTAGGTGAGAATGTCATCATCCAATCCATCGGTGCCTGTTCGGGAGTCAT AGTGGCAGGAGCCATCTTCACATTGCCCGCCCTTTATATATTGCAGGACAAATACCCCGAAATGACAGTCAACTTCTTTC AGATGTTTGTCAGCTCACTGCTGGGAGGTATTTTGGGGATCCTGTTCCTCATCCCCTTCCGTAAATATTTCGTCAGCGAC AAACATGGCGAATATCCCTTCCCCGAAGCCACTGCCAGTACGCAAGTGCTTGTTTCCGGCGAGAAAGGCGGAAGCCAGGC AAAGCCATTGCTTTTTGCAGGACTAATAGGAGGTCTGTACGATTTCATTGTAGCTACATTCGGCTGGTGGAATGAAAACT TCACCACCCGCGTATGCGGCTGGGGTGAGATGGTTGCCGAAAAAGCCAAACTGGTGATGAAAATAAACACCGGTGCAGCA GTATTAGGCCTAGGCTATATTGTCGGCTTGAAATACGCGGCTATCATTTGTGCCGGTTCATTGGTGGTATGGCTGGTTAT TGTTCCAGGTATGGCCCTGTTGTTCGGCGACCAAGTGCTGAATGCATGGAATCCGGCCTTGACACAAACCATCAGCGAAA TGTCACCCGAACTTATATTCAAGGAATATGCCAAAAGTATCGGTATCGGTGGTATCGCCATGGCCGGTGTGATCGGTATC GTGCGCTCATGGGGCATTATAAAGAGTGCTGTGGGACTGGCCGCCAAAGAGATGGGCGGCAAGAAGGTGGAAGCAAACGT CATCCGCACGCAGAAAGACCTTTCCATGAAAATAATCGCCTTCGGGTCCATCTTCACCATCCTGCTGATCTTACTGTTCT TCTTTTTTGATGTGATGCATGGAAATGTATTACACAGCATTGTAGCCATCCTGCTCGTAGCCGGCATTGCATTCCTGTTC ACCACCGTAGCAGCCAACGCTATCGCCATAGTCGGCACTAACCCTGTATCGGGAATGACACTGATGACACTGATACTTGC CTCAGTAGTAATGGTTGCCGTTGGACTGAAAGGTGCTACCGGCATGGTTGCTGCACTGGTTATGGGTGGTGTGGTTTGTA CGGCACTCTCTATGGCAGGCGGATTCATCACAGACTTGAAAATAGGTTACTGGCTGGGCAGTACTCCTGCCAAACAGGAA ACATGGAAATTCCTCGGCACACTAGTATCGGCAGCAACTGTGGGCGGCGTCATCATGATCCTGAACAAGACCTACGGCTT CTCCACCGGCGCATTGGCAGCTCCGCAGGCCAACGCGATGGCAGCCGTAATAGACCCGCTGATGAACGGTGTAGGCGCTC CCTGGCTGCTTTACGGAATAGGCGCTGTGCTGGCATTGGTGCTGACCTACTTCAAAGTACCCGCACTGGCTTTTGCGCTG GGTATGTTCATTCCACTGGAATTGAACCTGCCGTTGCTGGTAGGTGGAGCGGTGAATTGGTATGTCACTACCCGCAGCAA AGACGAGGCGGTGAACGCCGAACGTGGCGAGAAGGGAACTTTGCTGGCATCCGGATTCATAGCCGGAGGCGCATTGATGG GGGTTGTCAGTGCCGCCATGCGCTTTGGCGGTATCAATCTGATCAACGAAGAATGGCTGAGCAACCCGTTGAGCGAAGTG CTGTCAATGGCCGCCTATATCCTCCTGATCATATGGCTGGTTAAAGCCAGTATGCATATAAAGAAAAAATAA
Upstream 100 bases:
>100_bases TTTCAGATATTCTAATCAAATCATGAGGATGTTTCTCTATTTTTTCACTATTTTTGGGCATTTATTATGATAAATTTCAA AAATAACAACATAGAGAAAC
Downstream 100 bases:
>100_bases CCCTTTTTCAAATACCGTGAAAATAAAAGCTATATGAAACGAATCTTACTAATGAGTTTACTTGCAATCTCTACCGCATT ATCTGCCCAGAAACCTGTAG
Product: putative oligopeptide transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 663
Protein sequence:
>663_residues MKQEEEKSVGLPDNAFRPLKPGEQYHPIMSPNKKYPEVNLWSVLLGIAMAVLFSAAAAYLGLKVGQVFEAAIPIAIIAVG VSGAAKRKNALGENVIIQSIGACSGVIVAGAIFTLPALYILQDKYPEMTVNFFQMFVSSLLGGILGILFLIPFRKYFVSD KHGEYPFPEATASTQVLVSGEKGGSQAKPLLFAGLIGGLYDFIVATFGWWNENFTTRVCGWGEMVAEKAKLVMKINTGAA VLGLGYIVGLKYAAIICAGSLVVWLVIVPGMALLFGDQVLNAWNPALTQTISEMSPELIFKEYAKSIGIGGIAMAGVIGI VRSWGIIKSAVGLAAKEMGGKKVEANVIRTQKDLSMKIIAFGSIFTILLILLFFFFDVMHGNVLHSIVAILLVAGIAFLF TTVAANAIAIVGTNPVSGMTLMTLILASVVMVAVGLKGATGMVAALVMGGVVCTALSMAGGFITDLKIGYWLGSTPAKQE TWKFLGTLVSAATVGGVIMILNKTYGFSTGALAAPQANAMAAVIDPLMNGVGAPWLLYGIGAVLALVLTYFKVPALAFAL GMFIPLELNLPLLVGGAVNWYVTTRSKDEAVNAERGEKGTLLASGFIAGGALMGVVSAAMRFGGINLINEEWLSNPLSEV LSMAAYILLIIWLVKASMHIKKK
Sequences:
>Translated_663_residues MKQEEEKSVGLPDNAFRPLKPGEQYHPIMSPNKKYPEVNLWSVLLGIAMAVLFSAAAAYLGLKVGQVFEAAIPIAIIAVG VSGAAKRKNALGENVIIQSIGACSGVIVAGAIFTLPALYILQDKYPEMTVNFFQMFVSSLLGGILGILFLIPFRKYFVSD KHGEYPFPEATASTQVLVSGEKGGSQAKPLLFAGLIGGLYDFIVATFGWWNENFTTRVCGWGEMVAEKAKLVMKINTGAA VLGLGYIVGLKYAAIICAGSLVVWLVIVPGMALLFGDQVLNAWNPALTQTISEMSPELIFKEYAKSIGIGGIAMAGVIGI VRSWGIIKSAVGLAAKEMGGKKVEANVIRTQKDLSMKIIAFGSIFTILLILLFFFFDVMHGNVLHSIVAILLVAGIAFLF TTVAANAIAIVGTNPVSGMTLMTLILASVVMVAVGLKGATGMVAALVMGGVVCTALSMAGGFITDLKIGYWLGSTPAKQE TWKFLGTLVSAATVGGVIMILNKTYGFSTGALAAPQANAMAAVIDPLMNGVGAPWLLYGIGAVLALVLTYFKVPALAFAL GMFIPLELNLPLLVGGAVNWYVTTRSKDEAVNAERGEKGTLLASGFIAGGALMGVVSAAMRFGGINLINEEWLSNPLSEV LSMAAYILLIIWLVKASMHIKKK >Mature_663_residues MKQEEEKSVGLPDNAFRPLKPGEQYHPIMSPNKKYPEVNLWSVLLGIAMAVLFSAAAAYLGLKVGQVFEAAIPIAIIAVG VSGAAKRKNALGENVIIQSIGACSGVIVAGAIFTLPALYILQDKYPEMTVNFFQMFVSSLLGGILGILFLIPFRKYFVSD KHGEYPFPEATASTQVLVSGEKGGSQAKPLLFAGLIGGLYDFIVATFGWWNENFTTRVCGWGEMVAEKAKLVMKINTGAA VLGLGYIVGLKYAAIICAGSLVVWLVIVPGMALLFGDQVLNAWNPALTQTISEMSPELIFKEYAKSIGIGGIAMAGVIGI VRSWGIIKSAVGLAAKEMGGKKVEANVIRTQKDLSMKIIAFGSIFTILLILLFFFFDVMHGNVLHSIVAILLVAGIAFLF TTVAANAIAIVGTNPVSGMTLMTLILASVVMVAVGLKGATGMVAALVMGGVVCTALSMAGGFITDLKIGYWLGSTPAKQE TWKFLGTLVSAATVGGVIMILNKTYGFSTGALAAPQANAMAAVIDPLMNGVGAPWLLYGIGAVLALVLTYFKVPALAFAL GMFIPLELNLPLLVGGAVNWYVTTRSKDEAVNAERGEKGTLLASGFIAGGALMGVVSAAMRFGGINLINEEWLSNPLSEV LSMAAYILLIIWLVKASMHIKKK
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oligopeptide OPT transporter family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004814 - InterPro: IPR004813 [H]
Pfam domain/function: PF03169 OPT [H]
EC number: NA
Molecular weight: Translated: 69981; Mature: 69981
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQEEEKSVGLPDNAFRPLKPGEQYHPIMSPNKKYPEVNLWSVLLGIAMAVLFSAAAAYL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLKVGQVFEAAIPIAIIAVGVSGAAKRKNALGENVIIQSIGACSGVIVAGAIFTLPALYI HHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQDKYPEMTVNFFQMFVSSLLGGILGILFLIPFRKYFVSDKHGEYPFPEATASTQVLVSG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC EKGGSQAKPLLFAGLIGGLYDFIVATFGWWNENFTTRVCGWGEMVAEKAKLVMKINTGAA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHEEEEECCCHH VLGLGYIVGLKYAAIICAGSLVVWLVIVPGMALLFGDQVLNAWNPALTQTISEMSPELIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHH KEYAKSIGIGGIAMAGVIGIVRSWGIIKSAVGLAAKEMGGKKVEANVIRTQKDLSMKIIA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEH FGSIFTILLILLFFFFDVMHGNVLHSIVAILLVAGIAFLFTTVAANAIAIVGTNPVSGMT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHH LMTLILASVVMVAVGLKGATGMVAALVMGGVVCTALSMAGGFITDLKIGYWLGSTPAKQE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCHHH TWKFLGTLVSAATVGGVIMILNKTYGFSTGALAAPQANAMAAVIDPLMNGVGAPWLLYGI HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH GAVLALVLTYFKVPALAFALGMFIPLELNLPLLVGGAVNWYVTTRSKDEAVNAERGEKGT HHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCC LLASGFIAGGALMGVVSAAMRFGGINLINEEWLSNPLSEVLSMAAYILLIIWLVKASMHI EEEHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KKK CCC >Mature Secondary Structure MKQEEEKSVGLPDNAFRPLKPGEQYHPIMSPNKKYPEVNLWSVLLGIAMAVLFSAAAAYL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GLKVGQVFEAAIPIAIIAVGVSGAAKRKNALGENVIIQSIGACSGVIVAGAIFTLPALYI HHHHHHHHHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LQDKYPEMTVNFFQMFVSSLLGGILGILFLIPFRKYFVSDKHGEYPFPEATASTQVLVSG HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEC EKGGSQAKPLLFAGLIGGLYDFIVATFGWWNENFTTRVCGWGEMVAEKAKLVMKINTGAA CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHEEEEECCCHH VLGLGYIVGLKYAAIICAGSLVVWLVIVPGMALLFGDQVLNAWNPALTQTISEMSPELIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHH KEYAKSIGIGGIAMAGVIGIVRSWGIIKSAVGLAAKEMGGKKVEANVIRTQKDLSMKIIA HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCEEEEH FGSIFTILLILLFFFFDVMHGNVLHSIVAILLVAGIAFLFTTVAANAIAIVGTNPVSGMT HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHH LMTLILASVVMVAVGLKGATGMVAALVMGGVVCTALSMAGGFITDLKIGYWLGSTPAKQE HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEECCCCCHHH TWKFLGTLVSAATVGGVIMILNKTYGFSTGALAAPQANAMAAVIDPLMNGVGAPWLLYGI HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH GAVLALVLTYFKVPALAFALGMFIPLELNLPLLVGGAVNWYVTTRSKDEAVNAERGEKGT HHHHHHHHHHHHHHHHHHHHHHHCEEECCCCEEECCCEEEEEEECCCCCCCCCCCCCCCC LLASGFIAGGALMGVVSAAMRFGGINLINEEWLSNPLSEVLSMAAYILLIIWLVKASMHI EEEHHHHHHHHHHHHHHHHHHHCCCCEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KKK CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]