Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005214
Identifier: 150005214
GI number: 150005214
Start: 3406987
End: 3407916
Strand: Reverse
Name: 150005214
Synonym: BVU_2684
Alternate gene names: NA
Gene position: 3407916-3406987 (Counterclockwise)
Preceding gene: 150005216
Following gene: 150005213
Centisome position: 66.0
GC content: 47.74
Gene sequence:
>930_bases ATGAAAAAGAAATCTAACCTGACCCTATTTATGAAACAACTTATCCGGTCGCTAAAAGAAGAAGAGCGTTTCAGTACCGC CCACATCTACCAAAGCACCCTGAACGCCTTCATGCTCTTCTGCAAGACCGATGCCATCCGGTTCAACCAGATGGAACGTT CACGCCTGAAACAATTTGAGAACCACCTGCGCAACAAGGGATGTACCTGGAACACTGTCTCCACTTATATGCGTACCTTG CGAAGCATCTACAACAAAGCCGTGGACGATGGTCTGGCGGAAGAAAAGCCCCGTCTTTTCCGTCACGTATATACCGGCGT AAAAGCCAATACCAAACGTGCCCTCGATGCCAAAGACATGAGCAAATTATTAAGTGCCTCCCTTCCACGCCCCCTGCCGC AAAGCATGAAAGAGAGCCGGGCATGGATTACCCTGATGTTCCTGTTACGCGGAATGCCCTTTGTGGATCTGGCACACCTG CGCAAAACAGACCTGCAAGATTCCGTTATCTCCTACCGCCGCCACAAAACAGGAGCCCTGCTCACCGTCGAGATTCCTCC CGCTGCCATGAACCTTATCAAACGGTATCAAAATACAGACTCCGCCTCCCCCTACCTGCTTCCCATTCTCAGTGGAAACC GGAAAAGCGAAGAAGAGTATGCAGAATACCAACATGCCTTGCGGAAACTGAACTATGACCTGAAACAACTGGCGGTATAC TGCGGAATCAAACTCAACGTCAGTTCCTACACCAGCCGCCACACTTGGGCCACTTTGGCTAAATACTGTCACTTTTCGGA ACAATTGATTTGTGATGCCCTGGGGCACTCCTCCACAAAGGTGACCGAAACCTACTTGAAAAGCTTTAAAAACGATGAAT TAGACAGAGCAAATAAAGTAATAATTAATCACATTAATATTTCTATATAA
Upstream 100 bases:
>100_bases AAAAAGAAAAAAAGCTGATGAACAAACGGGGGCAAACCCAACTTTTAAAAGGAAATGTATTGTGGAACAGAATTACCTAA CATTCAAAACGAAAAAAACA
Downstream 100 bases:
>100_bases TCAATTTTAAAACTTCACATTACATTATAAAACAACAAATTACAAGACTGTTACTTTAGAAGTAACGGAACAGATTTTGG AAGCAAAAGTATACAAACTT
Product: integrase
Products: NA
Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Phage Integrase Family Protein; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase IntIA; Integrase/Site-Specific Recombinase; Recombinase/Integrase; Bacteriophage Integrase; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKKKSNLTLFMKQLIRSLKEEERFSTAHIYQSTLNAFMLFCKTDAIRFNQMERSRLKQFENHLRNKGCTWNTVSTYMRTL RSIYNKAVDDGLAEEKPRLFRHVYTGVKANTKRALDAKDMSKLLSASLPRPLPQSMKESRAWITLMFLLRGMPFVDLAHL RKTDLQDSVISYRRHKTGALLTVEIPPAAMNLIKRYQNTDSASPYLLPILSGNRKSEEEYAEYQHALRKLNYDLKQLAVY CGIKLNVSSYTSRHTWATLAKYCHFSEQLICDALGHSSTKVTETYLKSFKNDELDRANKVIINHINISI
Sequences:
>Translated_309_residues MKKKSNLTLFMKQLIRSLKEEERFSTAHIYQSTLNAFMLFCKTDAIRFNQMERSRLKQFENHLRNKGCTWNTVSTYMRTL RSIYNKAVDDGLAEEKPRLFRHVYTGVKANTKRALDAKDMSKLLSASLPRPLPQSMKESRAWITLMFLLRGMPFVDLAHL RKTDLQDSVISYRRHKTGALLTVEIPPAAMNLIKRYQNTDSASPYLLPILSGNRKSEEEYAEYQHALRKLNYDLKQLAVY CGIKLNVSSYTSRHTWATLAKYCHFSEQLICDALGHSSTKVTETYLKSFKNDELDRANKVIINHINISI >Mature_309_residues MKKKSNLTLFMKQLIRSLKEEERFSTAHIYQSTLNAFMLFCKTDAIRFNQMERSRLKQFENHLRNKGCTWNTVSTYMRTL RSIYNKAVDDGLAEEKPRLFRHVYTGVKANTKRALDAKDMSKLLSASLPRPLPQSMKESRAWITLMFLLRGMPFVDLAHL RKTDLQDSVISYRRHKTGALLTVEIPPAAMNLIKRYQNTDSASPYLLPILSGNRKSEEEYAEYQHALRKLNYDLKQLAVY CGIKLNVSSYTSRHTWATLAKYCHFSEQLICDALGHSSTKVTETYLKSFKNDELDRANKVIINHINISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35842; Mature: 35842
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSNLTLFMKQLIRSLKEEERFSTAHIYQSTLNAFMLFCKTDAIRFNQMERSRLKQFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLRNKGCTWNTVSTYMRTLRSIYNKAVDDGLAEEKPRLFRHVYTGVKANTKRALDAKDM HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHH SKLLSASLPRPLPQSMKESRAWITLMFLLRGMPFVDLAHLRKTDLQDSVISYRRHKTGAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCE LTVEIPPAAMNLIKRYQNTDSASPYLLPILSGNRKSEEEYAEYQHALRKLNYDLKQLAVY EEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH CGIKLNVSSYTSRHTWATLAKYCHFSEQLICDALGHSSTKVTETYLKSFKNDELDRANKV HCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHE IINHINISI EEEECEECC >Mature Secondary Structure MKKKSNLTLFMKQLIRSLKEEERFSTAHIYQSTLNAFMLFCKTDAIRFNQMERSRLKQFE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLRNKGCTWNTVSTYMRTLRSIYNKAVDDGLAEEKPRLFRHVYTGVKANTKRALDAKDM HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHH SKLLSASLPRPLPQSMKESRAWITLMFLLRGMPFVDLAHLRKTDLQDSVISYRRHKTGAL HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCE LTVEIPPAAMNLIKRYQNTDSASPYLLPILSGNRKSEEEYAEYQHALRKLNYDLKQLAVY EEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHH CGIKLNVSSYTSRHTWATLAKYCHFSEQLICDALGHSSTKVTETYLKSFKNDELDRANKV HCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHE IINHINISI EEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA