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The map label for this gene is rseC [C]

Identifier: 148828033

GI number: 148828033

Start: 1426788

End: 1427222

Strand: Direct

Name: rseC [C]

Synonym: CGSHiGG_07760

Alternate gene names: 148828033

Gene position: 1426788-1427222 (Clockwise)

Preceding gene: 148828032

Following gene: 148828035

Centisome position: 75.6

GC content: 36.78

Gene sequence:

>435_bases
ATGCTAAGAGAAAGTGCCGTTGTTATTAGCTATGAAAATGGCATTGCCAAAGTGAAATGCCAATCCCAAAGTGCCTGTGG
CCAATGTGCAGCTAAAAACAGTTGTGGAACATCAAGCCTTTCCGAATTAAACGGTAAACGTGGCGAGCATATTTTTAATG
TGGAAACATTAATGCCATTACGCGAAGGTCAAATTGTTGAAATTGGATTAGAAGAAAAGTCGATGTTGTTGTCGGCATTA
TTGATGTATGTTGTACCGCTTTTGACCTTATTGATTGTGACTATGTTGTCCGATTACATAAGCGATAATGAAATTCTGCG
TGCAATTTTAATCTTCGGATTAACCGCACTTTCTTTCATATTTGTAAAATCTTATAGCAGAAAATTAGGGCAACAAACAG
AGTTTCAGCCTGTTTTATTGCGCATATTATCTTAA

Upstream 100 bases:

>100_bases
TGAAGCGTCCTGACTATGCGGAATTTCTTTGTGGAAAACAACCGCACTTTAGCCGTGAAACGAAAAATCATCGCTTTGAT
ATTTATATGGGAGCATCACA

Downstream 100 bases:

>100_bases
GTTTTTTATTCGCTTTTTATTATTTCTGCGATCTAGATCGCAAACTATAAAGCTAGTTATTTAAATTACCCATTGAAAAA
AAGCTCTTTAGAGGCTTGGT

Product: positive regulator of sigma E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFIFVKSYSRKLGQQTEFQPVLLRILS

Sequences:

>Translated_144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFIFVKSYSRKLGQQTEFQPVLLRILS
>Mature_144_residues
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPLREGQIVEIGLEEKSMLLSAL
LMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFIFVKSYSRKLGQQTEFQPVLLRILS

Specific function: Seems To Modulate The Activity Of Rpoe (Sigma-E). [C]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=144, Percent_Identity=36.1111111111111, Blast_Score=97, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 15890; Mature: 15890

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPL
CCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCCEEECHHHHCCC
REGQIVEIGLEEKSMLLSALLMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FVKSYSRKLGQQTEFQPVLLRILS
HHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLRESAVVISYENGIAKVKCQSQSACGQCAAKNSCGTSSLSELNGKRGEHIFNVETLMPL
CCCCCEEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCCCCEEECHHHHCCC
REGQIVEIGLEEKSMLLSALLMYVVPLLTLLIVTMLSDYISDNEILRAILIFGLTALSFI
CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FVKSYSRKLGQQTEFQPVLLRILS
HHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]