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The map label for this gene is rpsQ

Identifier: 148827976

GI number: 148827976

Start: 1375040

End: 1375825

Strand: Direct

Name: rpsQ

Synonym: CGSHiGG_07435

Alternate gene names: NA

Gene position: 1375040-1375825 (Clockwise)

Preceding gene: 148827975

Following gene: 148827977

Centisome position: 72.86

GC content: 29.52

Gene sequence:

>786_bases
TTGGGTCATAGATTAATTAATTTCATCAACGGCGTTGATACCCGTAAAGAAACGTCAAAATTAGCAGAGGATAAATTCCC
AGAAGAACTTATCAATGATACAGATACTACTGGGAATATTTCTAATGAAGATTGGGATTGGTGGTGCCATTTATCTGATA
CAATGAAGTATATATTAATACATGATCTTCCTTATCAAGAAGAGGAGATTGGCATCACAGAGTTTTATGATGAAAATGAT
TTGGATACAGAAGCAGATATATATGATCGAGAGACTTTTGGAATCTTATTAGCAGAATATGTAATAGGATTATATTTGTT
AGATGATACTTTTATAGAGCCAGTGCTTGATAATATAAATATTCCTAACAATGTTTATAGTACAAATATATTTGCTATTC
ATTATGTTGCAAAGCATATTTTGGGTATTAAAGATCTAGATAAACGTTTAAAATCTGGTGATATTGAATTAGTTCGTGAA
TTAGGAGAGGTAACAATTGGTGGTAAGGAGAAGTATTTTTACTCTTTTGCAACTAAATATTGTAGTCATCATAATCCAAT
TGCTTTCCCAATTTATGATAGCTATGTGGAGCAAGTTCTCCTCTATTTTAATAAAGTAGATAAATTTTCAGCGTTGAAAA
GGAAAGATTTAAAAAATTACAGAAAATTTAAAGAGGTTTTGATAGATTTTCAAAGATTTTATAAATTAGAAAGATTTAGT
TTAAAAGAACTCGATCGGTATCTTTGGCTTTTAGGCAAGGAAATTTTCCCAAAATCTAAAAACTGA

Upstream 100 bases:

>100_bases
CCTAAACAAATACTGAAAAAAATATTTTTAATAATGGTACTTAAGAGAAATTTCTGAAGATCTTGGTTTTGAATATTCTG
ATGAGTGGAATACTCGTTAT

Downstream 100 bases:

>100_bases
TGAATTTATCTAAGGTAAGAGAAGAGAGCATTTCATTTTTTCTGCAGTTTATTTTTCATTCGATAAATTTTTGAGATGAT
GAGGATATTTTTATAATTCC

Product: 30S ribosomal protein S17

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MGHRLINFINGVDTRKETSKLAEDKFPEELINDTDTTGNISNEDWDWWCHLSDTMKYILIHDLPYQEEEIGITEFYDEND
LDTEADIYDRETFGILLAEYVIGLYLLDDTFIEPVLDNINIPNNVYSTNIFAIHYVAKHILGIKDLDKRLKSGDIELVRE
LGEVTIGGKEKYFYSFATKYCSHHNPIAFPIYDSYVEQVLLYFNKVDKFSALKRKDLKNYRKFKEVLIDFQRFYKLERFS
LKELDRYLWLLGKEIFPKSKN

Sequences:

>Translated_261_residues
MGHRLINFINGVDTRKETSKLAEDKFPEELINDTDTTGNISNEDWDWWCHLSDTMKYILIHDLPYQEEEIGITEFYDEND
LDTEADIYDRETFGILLAEYVIGLYLLDDTFIEPVLDNINIPNNVYSTNIFAIHYVAKHILGIKDLDKRLKSGDIELVRE
LGEVTIGGKEKYFYSFATKYCSHHNPIAFPIYDSYVEQVLLYFNKVDKFSALKRKDLKNYRKFKEVLIDFQRFYKLERFS
LKELDRYLWLLGKEIFPKSKN
>Mature_260_residues
GHRLINFINGVDTRKETSKLAEDKFPEELINDTDTTGNISNEDWDWWCHLSDTMKYILIHDLPYQEEEIGITEFYDENDL
DTEADIYDRETFGILLAEYVIGLYLLDDTFIEPVLDNINIPNNVYSTNIFAIHYVAKHILGIKDLDKRLKSGDIELVREL
GEVTIGGKEKYFYSFATKYCSHHNPIAFPIYDSYVEQVLLYFNKVDKFSALKRKDLKNYRKFKEVLIDFQRFYKLERFSL
KELDRYLWLLGKEIFPKSKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30951; Mature: 30820

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHRLINFINGVDTRKETSKLAEDKFPEELINDTDTTGNISNEDWDWWCHLSDTMKYILI
CCCHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHEEEEE
HDLPYQEEEIGITEFYDENDLDTEADIYDRETFGILLAEYVIGLYLLDDTFIEPVLDNIN
ECCCCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPNNVYSTNIFAIHYVAKHILGIKDLDKRLKSGDIELVRELGEVTIGGKEKYFYSFATKY
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
CSHHNPIAFPIYDSYVEQVLLYFNKVDKFSALKRKDLKNYRKFKEVLIDFQRFYKLERFS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKELDRYLWLLGKEIFPKSKN
HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GHRLINFINGVDTRKETSKLAEDKFPEELINDTDTTGNISNEDWDWWCHLSDTMKYILI
CCHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEHHHHHEEEEE
HDLPYQEEEIGITEFYDENDLDTEADIYDRETFGILLAEYVIGLYLLDDTFIEPVLDNIN
ECCCCCHHHCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IPNNVYSTNIFAIHYVAKHILGIKDLDKRLKSGDIELVRELGEVTIGGKEKYFYSFATKY
CCCCCHHHHHHHHHHHHHHHHCHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
CSHHNPIAFPIYDSYVEQVLLYFNKVDKFSALKRKDLKNYRKFKEVLIDFQRFYKLERFS
HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKELDRYLWLLGKEIFPKSKN
HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]