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The map label for this gene is yibP [C]

Identifier: 148827946

GI number: 148827946

Start: 1351156

End: 1352385

Strand: Reverse

Name: yibP [C]

Synonym: CGSHiGG_07275

Alternate gene names: 148827946

Gene position: 1352385-1351156 (Counterclockwise)

Preceding gene: 148827948

Following gene: 148827945

Centisome position: 71.66

GC content: 38.13

Gene sequence:

>1230_bases
ATGTTGCGTTTAGGCGTTAATCAAAAAACATTATTATTAACCGCACTTTTAAGCTGCGGTTTATTAATATTTTCGCCTGT
CAGCCAATCTTCCGATCTCAATCAAATTCAAAAACAAATTAAGCAACAAGAATCTAAAATAGAGAAGCAAAAACGTGAGC
AAGCTAAGTTACAAGCAAATTTAAAAAAACACGAGAGTAAAATTAACAGTGTTGAGGGCGAACTGCTTGAAACAGAAATA
AGTTTAAAGGAAATTCGTAAGCAAATTGCCGATGCAGATAAGCAATTCAAACAATTAGAAAAACAGGAACGTGAGCAAAA
AGCACGATTAGCCAAACAAATAGATATAATTTATCGTTCAGGCATTAATCCATCGCTGATTGAACGAATGTTTGCCCAAG
ATCCGACAAAAGCAGAGCGAATGAAAGTTTATTATCAGCATTTAAATCAAGTTCGGATTGAAATGATTAATAATTTAAAA
GCAACGCAAGCACAAATTGCAGTACAAAAAAGGGCGATTCTCTCTCAACAAAAGAATCACCGAAATCAACTTTCCACACA
AAAAAAACAACAACAAGCATTGCAAAAAGCACAGCAAGAGCATCAATCTACGCTGAATGAACTCAATAAAAATTTAGCCC
TAGATCAAGATAAATTGAATGCTCTAAAAGCAAACGAACAAGCACTTCGTCAAGAAATACAACGAGCTGAACAAGCAGCG
CGCGAACAAGAAAAACGTGAAAGAGAGGCACTTGCTCAACGCCAAAAAGCTGAAGAAAAACGAACATCAAAACCTTATCA
ACCCACTGTGCAAGAACGCCAATTACTTAATAGTACAAGCGGTTTAGGGGCGGCAAAAAAACAATATTCCTCACCAGTTT
CTGGTTCAATTTTGCATACTTTTGGTTCTATCCAAGCAGGCGAAGTACGTTGGAAAGGTATGGTAATTGGCGCATCAGCA
GGCGCGCCTGTTAAAGCAATTGCAGCTGGACGCGTTATTTTAGCGGGATATTTAAATGGTTATGGTTATATGGTTATTGT
TAAACACGGCGCAACTGATTTAAGTTTATATGGATTTAATCAATCGGTGTCAGTGAAAGTTGGTCAGCTTGTTTCCGCGG
GGCAGGTTATTGCTCAAGTAGGAAACACAGGGGAAATATCACGTTCCGCGCTTTATTTTGGTATTAGCCGTAAAGGAACG
CCAGTAAATCCAGCAGGGTGGGTTCATTGA

Upstream 100 bases:

>100_bases
GGAATGATTTCCTGATCTTTAGCAAAAAATAACCATCAAACTTTTTCGACTTTTCACAAATATGATAAGATTTGCGAGTT
TTACGGATTTAGGATGAATT

Downstream 100 bases:

>100_bases
TGAATATTCTGATAAAAAGTGCGGTAAAAAATTTCATCATTTTTTCTACCGCACTTTATGCCTCCATCTCCCTTGCACAA
AATAAACTTGCGATTGTAAT

Product: membrane-bound metallopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MLRLGVNQKTLLLTALLSCGLLIFSPVSQSSDLNQIQKQIKQQESKIEKQKREQAKLQANLKKHESKINSVEGELLETEI
SLKEIRKQIADADKQFKQLEKQEREQKARLAKQIDIIYRSGINPSLIERMFAQDPTKAERMKVYYQHLNQVRIEMINNLK
ATQAQIAVQKRAILSQQKNHRNQLSTQKKQQQALQKAQQEHQSTLNELNKNLALDQDKLNALKANEQALRQEIQRAEQAA
REQEKREREALAQRQKAEEKRTSKPYQPTVQERQLLNSTSGLGAAKKQYSSPVSGSILHTFGSIQAGEVRWKGMVIGASA
GAPVKAIAAGRVILAGYLNGYGYMVIVKHGATDLSLYGFNQSVSVKVGQLVSAGQVIAQVGNTGEISRSALYFGISRKGT
PVNPAGWVH

Sequences:

>Translated_409_residues
MLRLGVNQKTLLLTALLSCGLLIFSPVSQSSDLNQIQKQIKQQESKIEKQKREQAKLQANLKKHESKINSVEGELLETEI
SLKEIRKQIADADKQFKQLEKQEREQKARLAKQIDIIYRSGINPSLIERMFAQDPTKAERMKVYYQHLNQVRIEMINNLK
ATQAQIAVQKRAILSQQKNHRNQLSTQKKQQQALQKAQQEHQSTLNELNKNLALDQDKLNALKANEQALRQEIQRAEQAA
REQEKREREALAQRQKAEEKRTSKPYQPTVQERQLLNSTSGLGAAKKQYSSPVSGSILHTFGSIQAGEVRWKGMVIGASA
GAPVKAIAAGRVILAGYLNGYGYMVIVKHGATDLSLYGFNQSVSVKVGQLVSAGQVIAQVGNTGEISRSALYFGISRKGT
PVNPAGWVH
>Mature_409_residues
MLRLGVNQKTLLLTALLSCGLLIFSPVSQSSDLNQIQKQIKQQESKIEKQKREQAKLQANLKKHESKINSVEGELLETEI
SLKEIRKQIADADKQFKQLEKQEREQKARLAKQIDIIYRSGINPSLIERMFAQDPTKAERMKVYYQHLNQVRIEMINNLK
ATQAQIAVQKRAILSQQKNHRNQLSTQKKQQQALQKAQQEHQSTLNELNKNLALDQDKLNALKANEQALRQEIQRAEQAA
REQEKREREALAQRQKAEEKRTSKPYQPTVQERQLLNSTSGLGAAKKQYSSPVSGSILHTFGSIQAGEVRWKGMVIGASA
GAPVKAIAAGRVILAGYLNGYGYMVIVKHGATDLSLYGFNQSVSVKVGQLVSAGQVIAQVGNTGEISRSALYFGISRKGT
PVNPAGWVH

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibP [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=406, Percent_Identity=39.9014778325123, Blast_Score=254, Evalue=8e-69,
Organism=Escherichia coli, GI1789099, Length=114, Percent_Identity=42.9824561403509, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI87082174, Length=114, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 45748; Mature: 45748

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLGVNQKTLLLTALLSCGLLIFSPVSQSSDLNQIQKQIKQQESKIEKQKREQAKLQAN
CEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKHESKINSVEGELLETEISLKEIRKQIADADKQFKQLEKQEREQKARLAKQIDIIYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GINPSLIERMFAQDPTKAERMKVYYQHLNQVRIEMINNLKATQAQIAVQKRAILSQQKNH
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RNQLSTQKKQQQALQKAQQEHQSTLNELNKNLALDQDKLNALKANEQALRQEIQRAEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
REQEKREREALAQRQKAEEKRTSKPYQPTVQERQLLNSTSGLGAAKKQYSSPVSGSILHT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHH
FGSIQAGEVRWKGMVIGASAGAPVKAIAAGRVILAGYLNGYGYMVIVKHGATDLSLYGFN
HCCCCCCCEEEEEEEEECCCCCCHHHHHHCHHHEEHHHCCCEEEEEEECCCCEEEEECCC
QSVSVKVGQLVSAGQVIAQVGNTGEISRSALYFGISRKGTPVNPAGWVH
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MLRLGVNQKTLLLTALLSCGLLIFSPVSQSSDLNQIQKQIKQQESKIEKQKREQAKLQAN
CEECCCCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKHESKINSVEGELLETEISLKEIRKQIADADKQFKQLEKQEREQKARLAKQIDIIYRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GINPSLIERMFAQDPTKAERMKVYYQHLNQVRIEMINNLKATQAQIAVQKRAILSQQKNH
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
RNQLSTQKKQQQALQKAQQEHQSTLNELNKNLALDQDKLNALKANEQALRQEIQRAEQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH
REQEKREREALAQRQKAEEKRTSKPYQPTVQERQLLNSTSGLGAAKKQYSSPVSGSILHT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHH
FGSIQAGEVRWKGMVIGASAGAPVKAIAAGRVILAGYLNGYGYMVIVKHGATDLSLYGFN
HCCCCCCCEEEEEEEEECCCCCCHHHHHHCHHHEEHHHCCCEEEEEEECCCCEEEEECCC
QSVSVKVGQLVSAGQVIAQVGNTGEISRSALYFGISRKGTPVNPAGWVH
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]