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The map label for this gene is yibQ [C]

Identifier: 148827945

GI number: 148827945

Start: 1350314

End: 1351156

Strand: Reverse

Name: yibQ [C]

Synonym: CGSHiGG_07270

Alternate gene names: 148827945

Gene position: 1351156-1350314 (Counterclockwise)

Preceding gene: 148827946

Following gene: 148827941

Centisome position: 71.6

GC content: 39.26

Gene sequence:

>843_bases
ATGAATATTCTGATAAAAAGTGCGGTAAAAAATTTCATCATTTTTTCTACCGCACTTTATGCCTCCATCTCCCTTGCACA
AAATAAACTTGCGATTGTAATTGATGATGTAGGCTATCATTCCAAGGAAGATGCGGCTGTTTTTGCAATGCCACGTGAAA
TATCGGTGGCAATTATCCCTGCCGCACCCTATGCTCGAGTACGTAACCAAGAAGCGAAATCTCAAGGCAGAGACATTTTA
ATTCATATGCCGATGCAACCAATTAGTGCAATTAAAATCGAAGACGGTGGATTACATTTAGGAATGTCTGCAGCACAAGT
AAATGATCGCGTTAATACTGCTAAAAATATTGTGCGTGATGCCATCGGTATGAACAATCATATGGGGAGTGCAGCTACGG
CAGATCCCCAATTAATGACTTATTTAATGACCGCACTTCAAGAAAAACATTTATTCTTTTTAGATAGTCGAACAATAGGA
AAATCTGTAGCTGGGAAAATAGCAAAAGAACAAGGCGTGCGTTCATTAGATCGCCATATATTTTTAGATGATAGTAACGA
ATTCGCAGACGTTCAACGTCAATTTAAAGCAGCAATTCACTATGCTAGAAAACACGGCTCCGCCATTGCAATAGGTCATC
CTCGTCCAAATACGATTGCTGTTTTACAAGCAGGTCTTCGTAATTTACCCGAAGATATTCAATTAGTCGGAATGGGCAAC
TTATGGCGTAATGAAAAAGTTATTCCGCCCAAGCCATTTATTTTATTATTCAGCGAAGTGCCTGCGCCAACTTCTATAGA
ACCTTTTGAGCCTGTAGGATTATTGCGTGGAATTCCAAAATAA

Upstream 100 bases:

>100_bases
TTGCTCAAGTAGGAAACACAGGGGAAATATCACGTTCCGCGCTTTATTTTGGTATTAGCCGTAAAGGAACGCCAGTAAAT
CCAGCAGGGTGGGTTCATTG

Downstream 100 bases:

>100_bases
AACAGTTGCTAATATTTAAAAATAAACATTAACAACTGCTTTGTCTACTATATCAATTTATCAATGGAATAAGTTATAAA
TACGTCTTTTAATATTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNILIKSAVKNFIIFSTALYASISLAQNKLAIVIDDVGYHSKEDAAVFAMPREISVAIIPAAPYARVRNQEAKSQGRDIL
IHMPMQPISAIKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK

Sequences:

>Translated_280_residues
MNILIKSAVKNFIIFSTALYASISLAQNKLAIVIDDVGYHSKEDAAVFAMPREISVAIIPAAPYARVRNQEAKSQGRDIL
IHMPMQPISAIKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK
>Mature_280_residues
MNILIKSAVKNFIIFSTALYASISLAQNKLAIVIDDVGYHSKEDAAVFAMPREISVAIIPAAPYARVRNQEAKSQGRDIL
IHMPMQPISAIKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibQ [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=226, Percent_Identity=45.1327433628319, Blast_Score=186, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 30700; Mature: 30700

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIKSAVKNFIIFSTALYASISLAQNKLAIVIDDVGYHSKEDAAVFAMPREISVAIIP
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEEEC
AAPYARVRNQEAKSQGRDILIHMPMQPISAIKIEDGGLHLGMSAAQVNDRVNTAKNIVRD
CCCHHHHHCHHHHHCCCEEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEE
FLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGN
EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCC
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MNILIKSAVKNFIIFSTALYASISLAQNKLAIVIDDVGYHSKEDAAVFAMPREISVAIIP
CCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCEEEEEEEC
AAPYARVRNQEAKSQGRDILIHMPMQPISAIKIEDGGLHLGMSAAQVNDRVNTAKNIVRD
CCCHHHHHCHHHHHCCCEEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEE
FLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGN
EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEECCC
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]