Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 148827908

GI number: 148827908

Start: 1299047

End: 1299868

Strand: Reverse

Name: metQ [H]

Synonym: CGSHiGG_07055

Alternate gene names: 148827908

Gene position: 1299868-1299047 (Counterclockwise)

Preceding gene: 148827909

Following gene: 148827904

Centisome position: 68.88

GC content: 35.52

Gene sequence:

>822_bases
ATGAAATTAAAACAACTTTTTGCAATCACTGCAATCGCATCAGCTCTCGTTTTAACAGGCTGTAAAGAAGACAAAAAACC
TGAAGCTGCAGCAGCACCGCTTAAAATCAAAGTCGGTGTAATGTCTGGCCCTGAGCATCAAGTTGCAGAAATTGCAGCAA
AAGTCGCTAAAGAAAAATATGGTTTAGACGTTCAATTCGTTGAATTCAATGACTACGCATTACCAAATGAAGCTGTATCT
AAAGGTGATTTAGATGCAAACGCAATGCAACATAAACCTTATTTAGATGAAGATGCAAAAGCGAAAAATTTAAATAACTT
AGTTATCGTGGGTAATACTTTCGTCTATCCATTAGCGGGTTATTCTAAAAAAATCAAAAATGTGAATGAATTACAAGACG
GTGCTAAAGTTGTTGTTCCTAACGATCCAACAAACCGTGGTCGTGCATTAATTCTTCTTGAAAAACAAGGTTTAATCAAA
TTAAAAGATGCAAATAACCTTCTTTCAACTGTATTAGATATTGTTGAAAATCCGAAAAAATTAAACATCACTGAAGTAGA
TACTTCTGTTGCGGCACGCGCATTAGACGACGTTGATTTAGCTGTAGTAAACAATACTTATGCGGGTCAAGTAGGCTTAA
ATGCTCAAGATGACGGTGTATTTGTAGAAGATAAAGATTCGCCATATGTGAACATTATCGTTTCTCGTACCGATAACAAA
GACAGCAAAGCTGTTCAAGATTTCGTAAAATCTTACCAAACAGAAGAAGTTTACCAAGAAGCTCAAAAACACTTTAAAGA
TGGCGTTGTAAAAGGTTGGTAA

Upstream 100 bases:

>100_bases
TATTCGTTATGATTAGCCAAAAACTCGGCGATACACTGGCTAGAAAAGTGGATCATCGTTAATTAAACGCAACTCTTAAC
TTAAACAGGAAGGAAATCCT

Downstream 100 bases:

>100_bases
TTTCTACCGCACTTTAACCCATTACTAAATCCCTTGCCCAGCAAGGGATTTTCTTATCTAAGCTCGGAATGTTTTAAAGA
ATATTGGTAGCTAAAAATAA

Product: putative D-methionine-binding lipoprotein MetQ

Products: NA

Alternate protein names: 28 kDa outer membrane protein [H]

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MKLKQLFAITAIASALVLTGCKEDKKPEAAAAPLKIKVGVMSGPEHQVAEIAAKVAKEKYGLDVQFVEFNDYALPNEAVS
KGDLDANAMQHKPYLDEDAKAKNLNNLVIVGNTFVYPLAGYSKKIKNVNELQDGAKVVVPNDPTNRGRALILLEKQGLIK
LKDANNLLSTVLDIVENPKKLNITEVDTSVAARALDDVDLAVVNNTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNK
DSKAVQDFVKSYQTEEVYQEAQKHFKDGVVKGW

Sequences:

>Translated_273_residues
MKLKQLFAITAIASALVLTGCKEDKKPEAAAAPLKIKVGVMSGPEHQVAEIAAKVAKEKYGLDVQFVEFNDYALPNEAVS
KGDLDANAMQHKPYLDEDAKAKNLNNLVIVGNTFVYPLAGYSKKIKNVNELQDGAKVVVPNDPTNRGRALILLEKQGLIK
LKDANNLLSTVLDIVENPKKLNITEVDTSVAARALDDVDLAVVNNTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNK
DSKAVQDFVKSYQTEEVYQEAQKHFKDGVVKGW
>Mature_273_residues
MKLKQLFAITAIASALVLTGCKEDKKPEAAAAPLKIKVGVMSGPEHQVAEIAAKVAKEKYGLDVQFVEFNDYALPNEAVS
KGDLDANAMQHKPYLDEDAKAKNLNNLVIVGNTFVYPLAGYSKKIKNVNELQDGAKVVVPNDPTNRGRALILLEKQGLIK
LKDANNLLSTVLDIVENPKKLNITEVDTSVAARALDDVDLAVVNNTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNK
DSKAVQDFVKSYQTEEVYQEAQKHFKDGVVKGW

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=275, Percent_Identity=60.3636363636364, Blast_Score=329, Evalue=1e-91,
Organism=Escherichia coli, GI1790093, Length=240, Percent_Identity=54.1666666666667, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29814; Mature: 29814

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKQLFAITAIASALVLTGCKEDKKPEAAAAPLKIKVGVMSGPEHQVAEIAAKVAKEKY
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
GLDVQFVEFNDYALPNEAVSKGDLDANAMQHKPYLDEDAKAKNLNNLVIVGNTFVYPLAG
CCCEEEEECCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCC
YSKKIKNVNELQDGAKVVVPNDPTNRGRALILLEKQGLIKLKDANNLLSTVLDIVENPKK
HHHHHCCHHHHCCCCEEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCE
LNITEVDTSVAARALDDVDLAVVNNTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNK
EEEEECHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCCEEEECCCCCEEEEEEEECCCC
DSKAVQDFVKSYQTEEVYQEAQKHFKDGVVKGW
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLKQLFAITAIASALVLTGCKEDKKPEAAAAPLKIKVGVMSGPEHQVAEIAAKVAKEKY
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
GLDVQFVEFNDYALPNEAVSKGDLDANAMQHKPYLDEDAKAKNLNNLVIVGNTFVYPLAG
CCCEEEEECCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCEEEECCC
YSKKIKNVNELQDGAKVVVPNDPTNRGRALILLEKQGLIKLKDANNLLSTVLDIVENPKK
HHHHHCCHHHHCCCCEEEECCCCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHCCCCE
LNITEVDTSVAARALDDVDLAVVNNTYAGQVGLNAQDDGVFVEDKDSPYVNIIVSRTDNK
EEEEECHHHHHHHHHCCCEEEEECCCCCCEECCCCCCCCEEEECCCCCEEEEEEEECCCC
DSKAVQDFVKSYQTEEVYQEAQKHFKDGVVKGW
HHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1987077; 7542800; 10675023 [H]