Click here to switch to the map view.

The map label for this gene is fucI [H]

Identifier: 148827903

GI number: 148827903

Start: 1291105

End: 1292721

Strand: Reverse

Name: fucI [H]

Synonym: CGSHiGG_07020

Alternate gene names: 148827903

Gene position: 1292721-1291105 (Counterclockwise)

Preceding gene: 148827904

Following gene: 148827902

Centisome position: 68.5

GC content: 41.5

Gene sequence:

>1617_bases
ATGGCTCTTGCTACTCAATTAAATCGCATAAAAATCGGTATTCGTCCAACTATTGATGGTCGTCGAATGGGAGTTCGAGA
ATCTCTTGAAAGCCAAACAATGCGTATGGCTCAATCTGTTGCTCAATTATTACAAACACATATTCGTCATACAGATGGTA
CTTTCGTTGAATGTGTAGTTGCAGATAGCACTATCGGCGGTGTAGCCGAAGCAGCCGCCTGTGCGGATAAATTTAAACGC
GAAAACGTTGGATTAACCATTACCGTTACCCCTTGTTGGTGTTATGGCTCAGAAACCATTGATATGGATCCTCACATGCC
TAAAGCAATTTGGGGATTTAACGGTACGGAACGCCCAGGTGCGGTTTACTTGGCTGCCGCCCTTGCTGGTCATTCTCAAT
TAGGACTACCAGCCTTTTCCATTTACGGCACAGAAGTTCAAGAAGCCGATGACACAAACATTCCTGAAGATGTAAAAGAA
AAATTATTGCGTTTTGCTCGTGCTGGGCTTGCTGTTGCAAGTATTCGAGGAAAATCCTATTTATCTATTGGGTCAGTTTC
CATGGGAATTGCAGGTTCTATTGTAAATCAAGCTTTCTTCCAAGAATATTTAGGTATGCGTAATGAATATGTGGATATGA
TGGAAATTAAACGCCGTTTAGACCGCAAAATTTATGATCAAGAAGAAGTTGATTTAGCCTTGAGTTGGGTTAAACAATAT
TGCAAAGAAGGGGTTGATGTAAATAGCCTAGAGAATCAACGCAATGCGGAAGAGCGTGCAGAACTTTGGGAAAATGTTGT
GAAAATGACCATTATCACTCGTGATTTGATGGTAGGAAATCCAAAATTAGCAACATTAAATTATGCAGAAGAAGCCTTAG
GTCATAATGCCATTGCAGCAGGTTTTCAAGGGCAGCGTCATTGGACTGATCATTTGCCAAACGGCGATTTTATGGAGGCA
ATGCTCAATTCAACTTATGACTGGAATGGCGTGCGTCCACCTTATATTCTTGCCACGGAAAATGATAGTTTAAATGCAAT
AGGAATGTTATTTGGGCATCAATTAACTGGCAAAGCTCAAATTTTCGCAGATGTGCGTACTTATTGGAGTCAAGATTCGG
TTGAGCGTGTTACTGGATGGCGACCTGAAAGTGGATTCATTCATTTAATCAATTCAGGTTCAGCTGCACTTGATGGAACG
GGAGAACATCAAGATGCTCAAGGCAATCCAACTTTAAAACCAGCATGGGATGTTACCGAAGAAGAAGCAAAACGCTGCTT
AGAAAACACACGTTGGTGCCCTGCTGTTCACGAATATTTTCGAGGGGGCGGTTTATCTTCTCAATTCCTAACCAAAGGTG
GCATACCGTTTACAATGCACCGTATTAATCTTATTAAAGGTTTAGGTCCCGTTTTACAAATTGCGGAAGGCTGGTCAATC
GACTTACCTCAAGATGTACATAATAAATTAAATCAACGTACTAATGAAACTTGGCCAACAACATGGTTTGTTCCACGTTT
AACTGGAAAAGGTGCATTTACTGATGTGTATTCAGTCATGGCAAATTGGGGCGCAAATCACTGTGTAGCGACTCACGGTC
ATGTGGGGCTGATCTAA

Upstream 100 bases:

>100_bases
TCCTCATCATTTTTCTTTCACACTCTAATTCAATGAAAGCACAATTTGTTCCGCAGTGATTTCATCATTCTTACTTAAGC
ACAAACAAAGGAGTGTAACT

Downstream 100 bases:

>100_bases
TCACTCTTGCTTCAATGTTACGCATTCCAGTCTGTATGCATAATGTATCAGAGAAAAATATTTTCCGCCCTAGCGCTTGG
AATGGATTTGGTCAAGACAA

Product: L-fucose isomerase

Products: NA

Alternate protein names: 6-deoxy-L-galactose isomerase; FucIase [H]

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MALATQLNRIKIGIRPTIDGRRMGVRESLESQTMRMAQSVAQLLQTHIRHTDGTFVECVVADSTIGGVAEAAACADKFKR
ENVGLTITVTPCWCYGSETIDMDPHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDTNIPEDVKE
KLLRFARAGLAVASIRGKSYLSIGSVSMGIAGSIVNQAFFQEYLGMRNEYVDMMEIKRRLDRKIYDQEEVDLALSWVKQY
CKEGVDVNSLENQRNAEERAELWENVVKMTIITRDLMVGNPKLATLNYAEEALGHNAIAAGFQGQRHWTDHLPNGDFMEA
MLNSTYDWNGVRPPYILATENDSLNAIGMLFGHQLTGKAQIFADVRTYWSQDSVERVTGWRPESGFIHLINSGSAALDGT
GEHQDAQGNPTLKPAWDVTEEEAKRCLENTRWCPAVHEYFRGGGLSSQFLTKGGIPFTMHRINLIKGLGPVLQIAEGWSI
DLPQDVHNKLNQRTNETWPTTWFVPRLTGKGAFTDVYSVMANWGANHCVATHGHVGLI

Sequences:

>Translated_538_residues
MALATQLNRIKIGIRPTIDGRRMGVRESLESQTMRMAQSVAQLLQTHIRHTDGTFVECVVADSTIGGVAEAAACADKFKR
ENVGLTITVTPCWCYGSETIDMDPHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDTNIPEDVKE
KLLRFARAGLAVASIRGKSYLSIGSVSMGIAGSIVNQAFFQEYLGMRNEYVDMMEIKRRLDRKIYDQEEVDLALSWVKQY
CKEGVDVNSLENQRNAEERAELWENVVKMTIITRDLMVGNPKLATLNYAEEALGHNAIAAGFQGQRHWTDHLPNGDFMEA
MLNSTYDWNGVRPPYILATENDSLNAIGMLFGHQLTGKAQIFADVRTYWSQDSVERVTGWRPESGFIHLINSGSAALDGT
GEHQDAQGNPTLKPAWDVTEEEAKRCLENTRWCPAVHEYFRGGGLSSQFLTKGGIPFTMHRINLIKGLGPVLQIAEGWSI
DLPQDVHNKLNQRTNETWPTTWFVPRLTGKGAFTDVYSVMANWGANHCVATHGHVGLI
>Mature_537_residues
ALATQLNRIKIGIRPTIDGRRMGVRESLESQTMRMAQSVAQLLQTHIRHTDGTFVECVVADSTIGGVAEAAACADKFKRE
NVGLTITVTPCWCYGSETIDMDPHMPKAIWGFNGTERPGAVYLAAALAGHSQLGLPAFSIYGTEVQEADDTNIPEDVKEK
LLRFARAGLAVASIRGKSYLSIGSVSMGIAGSIVNQAFFQEYLGMRNEYVDMMEIKRRLDRKIYDQEEVDLALSWVKQYC
KEGVDVNSLENQRNAEERAELWENVVKMTIITRDLMVGNPKLATLNYAEEALGHNAIAAGFQGQRHWTDHLPNGDFMEAM
LNSTYDWNGVRPPYILATENDSLNAIGMLFGHQLTGKAQIFADVRTYWSQDSVERVTGWRPESGFIHLINSGSAALDGTG
EHQDAQGNPTLKPAWDVTEEEAKRCLENTRWCPAVHEYFRGGGLSSQFLTKGGIPFTMHRINLIKGLGPVLQIAEGWSID
LPQDVHNKLNQRTNETWPTTWFVPRLTGKGAFTDVYSVMANWGANHCVATHGHVGLI

Specific function: Converts the aldose L-fucose into the corresponding ketose L-fuculose [H]

COG id: COG2407

COG function: function code G; L-fucose isomerase and related proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the L-fucose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1789167, Length=530, Percent_Identity=68.1132075471698, Blast_Score=767, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015888
- InterPro:   IPR004216
- InterPro:   IPR012888
- InterPro:   IPR005763
- InterPro:   IPR009015
- InterPro:   IPR012889 [H]

Pfam domain/function: PF02952 Fucose_iso_C; PF07881 Fucose_iso_N1; PF07882 Fucose_iso_N2 [H]

EC number: =5.3.1.25 [H]

Molecular weight: Translated: 59662; Mature: 59531

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALATQLNRIKIGIRPTIDGRRMGVRESLESQTMRMAQSVAQLLQTHIRHTDGTFVECVV
CCCHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ADSTIGGVAEAAACADKFKRENVGLTITVTPCWCYGSETIDMDPHMPKAIWGFNGTERPG
ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCCCCCCEECCCCCCCCC
AVYLAAALAGHSQLGLPAFSIYGTEVQEADDTNIPEDVKEKLLRFARAGLAVASIRGKSY
CEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEECCCCE
LSIGSVSMGIAGSIVNQAFFQEYLGMRNEYVDMMEIKRRLDRKIYDQEEVDLALSWVKQY
EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CKEGVDVNSLENQRNAEERAELWENVVKMTIITRDLMVGNPKLATLNYAEEALGHNAIAA
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHCCCCEEC
GFQGQRHWTDHLPNGDFMEAMLNSTYDWNGVRPPYILATENDSLNAIGMLFGHQLTGKAQ
CCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHH
IFADVRTYWSQDSVERVTGWRPESGFIHLINSGSAALDGTGEHQDAQGNPTLKPAWDVTE
HHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCH
EEAKRCLENTRWCPAVHEYFRGGGLSSQFLTKGGIPFTMHRINLIKGLGPVLQIAEGWSI
HHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHCCCCCEEHHHHHHHHHCCHHHHHHCCCCC
DLPQDVHNKLNQRTNETWPTTWFVPRLTGKGAFTDVYSVMANWGANHCVATHGHVGLI
CCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ALATQLNRIKIGIRPTIDGRRMGVRESLESQTMRMAQSVAQLLQTHIRHTDGTFVECVV
CCHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
ADSTIGGVAEAAACADKFKRENVGLTITVTPCWCYGSETIDMDPHMPKAIWGFNGTERPG
ECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEECCCCCCCCCEECCCCCCCCC
AVYLAAALAGHSQLGLPAFSIYGTEVQEADDTNIPEDVKEKLLRFARAGLAVASIRGKSY
CEEEEHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCHHEEEECCCCE
LSIGSVSMGIAGSIVNQAFFQEYLGMRNEYVDMMEIKRRLDRKIYDQEEVDLALSWVKQY
EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
CKEGVDVNSLENQRNAEERAELWENVVKMTIITRDLMVGNPKLATLNYAEEALGHNAIAA
HHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHCCCCEEC
GFQGQRHWTDHLPNGDFMEAMLNSTYDWNGVRPPYILATENDSLNAIGMLFGHQLTGKAQ
CCCCCCCHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCCCHH
IFADVRTYWSQDSVERVTGWRPESGFIHLINSGSAALDGTGEHQDAQGNPTLKPAWDVTE
HHHHHHHHHCCCCHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCH
EEAKRCLENTRWCPAVHEYFRGGGLSSQFLTKGGIPFTMHRINLIKGLGPVLQIAEGWSI
HHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHCCCCCEEHHHHHHHHHCCHHHHHHCCCCC
DLPQDVHNKLNQRTNETWPTTWFVPRLTGKGAFTDVYSVMANWGANHCVATHGHVGLI
CCCHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA