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The map label for this gene is 148827874

Identifier: 148827874

GI number: 148827874

Start: 1243771

End: 1244349

Strand: Direct

Name: 148827874

Synonym: CGSHiGG_06810

Alternate gene names: NA

Gene position: 1243771-1244349 (Clockwise)

Preceding gene: 148827873

Following gene: 148827875

Centisome position: 65.91

GC content: 41.28

Gene sequence:

>579_bases
ATGAAAATTTTCGGCACAATGTACGATAAAACGATGGAATGGTCAAAACATCGTTTTGCTGCTTTTTGGCTCTCTTTTGT
CAGTTTTATCGAGGCGATATTTTTTCCTATTCCGCCCGATGTGATGTTGATCCCAATGTCTATGTCAAAGCCAAAAGGTG
CGGTGAAATTTGCATTTTATACGGCAATTGCATCTGTAATCGGCGGAATTATCGGTTATGCTATCGGTTTTTATGCAACG
GATTGGGTGGAAAACATTGTGCAACAATGGGGATATGCTGCGCATTGGGCAAAAGCCATAAATTGGTTTGAGCAATGGGG
TGTATTAGTTGTGTTTGTGGCAGGGTTTAGCCCAATTCCTTACAAGGTGTTTACGCTCTGCTCTGGCGTTATGCAAATGG
CATTTTTCCCTTTTGTCATCACCGCATTTGTTTCACGTTTAGCGCGTTTCTTGCTAGTAGCAAAATTAGCTGCATGGGGC
GGTGAAAAATTCGCAGCAAAATTGCGAAAATCTATTGAGATTATTGGCTGGGCAGTGGTTGTACTGGCTGTAATCGCTTA
TTTTATACTGAAAAATTAG

Upstream 100 bases:

>100_bases
ATGTGTCTATCACACCAATTCAAGCGGATCTTACCGCATATCATTCATTGCTTTCCTTGCAAAATTGGTTAGAGCAGGAA
TTTACCAAATAGAGAAAAAT

Downstream 100 bases:

>100_bases
GATAGAAAATGAACAAATTAAGTCTTGTTTTAGTAGCTGGATTTCTTTTGGTTGGATGTGCATCTGAACCAGTTAAAGAT
CCAGACGCATTACCAAATGG

Product: lipoprotein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKIFGTMYDKTMEWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKGAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAINWFEQWGVLVVFVAGFSPIPYKVFTLCSGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWAVVVLAVIAYFILKN

Sequences:

>Translated_192_residues
MKIFGTMYDKTMEWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKGAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAINWFEQWGVLVVFVAGFSPIPYKVFTLCSGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWAVVVLAVIAYFILKN
>Mature_192_residues
MKIFGTMYDKTMEWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKGAVKFAFYTAIASVIGGIIGYAIGFYAT
DWVENIVQQWGYAAHWAKAINWFEQWGVLVVFVAGFSPIPYKVFTLCSGVMQMAFFPFVITAFVSRLARFLLVAKLAAWG
GEKFAAKLRKSIEIIGWAVVVLAVIAYFILKN

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21671; Mature: 21671

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFGTMYDKTMEWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKGAVKFAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
TAIASVIGGIIGYAIGFYATDWVENIVQQWGYAAHWAKAINWFEQWGVLVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTLCSGVMQMAFFPFVITAFVSRLARFLLVAKLAAWGGEKFAAKLRKSIEIIGWAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLAVIAYFILKN
HHHHHHHHHHCC
>Mature Secondary Structure
MKIFGTMYDKTMEWSKHRFAAFWLSFVSFIEAIFFPIPPDVMLIPMSMSKPKGAVKFAFY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
TAIASVIGGIIGYAIGFYATDWVENIVQQWGYAAHWAKAINWFEQWGVLVVFVAGFSPIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
YKVFTLCSGVMQMAFFPFVITAFVSRLARFLLVAKLAAWGGEKFAAKLRKSIEIIGWAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
VLAVIAYFILKN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]