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The map label for this gene is ytfM [C]

Identifier: 148827870

GI number: 148827870

Start: 1238916

End: 1240685

Strand: Reverse

Name: ytfM [C]

Synonym: CGSHiGG_06780

Alternate gene names: 148827870

Gene position: 1240685-1238916 (Counterclockwise)

Preceding gene: 148827871

Following gene: 148827869

Centisome position: 65.74

GC content: 39.83

Gene sequence:

>1770_bases
GTGCAATTTACTCAAAAAATTTTAGCCCTCAAAATGAAAAAAATATCACTAAAACTCACCGCACTTTTTTTAGCATTAAG
TTGCTTTCCCGCATTTGCTGAACAAACCGTTGATATTGAAGTTCAAGGCATCCGTGGTTTCCGTGCTGTGCGTAATACGG
ATCTCAATGTTAATTTGATCAATAAAGAAGAAATGGACGGGTCTGAACGCTATCAGCATTTGGTAACTAAAGCCGTGGAT
CGTGGTTTGCGTGTGTTTGGTTATTATGAATCTTCCGTGCGTTTTGAACGAAAACAGCGTCAAGGCAAACGCGATTTATT
GATTGCTCATGTTACACCAGGCGAGCCAACAAAAATTGCGGGGACTGATGTGCAAATTGAGGGAGAAGCCGCACAAGATG
AAAATTTTGATGCGCTACGTAAAAACTTGCCAAAAGAAGGCGTTTTGGTTGAACACCAAACTTACGATGATTACAAAACA
GCGATTTCACGCTTGGCATTAAATCGTGGGTATTTTGATGGGAACTTTAAAATTTCACGTTTAGAAATCAGCCCTGAAAC
CCATCAAGCATGGTGGCGAATGTTATTTGATAGTGGTGTCCGTTATCATTATGGCAATATTACTTTTAGCCATTCACAAA
TCCGTGACGATTATCTCAATAATATTCTTAACATCAAATCTGGCGATCCATATTTAATGAATAATTTGTCGGATTTAACC
AGCGATTTTTCATCTTCAAATTGGTTTAGCTCAGTATTAGTTCAGCCTAATGTTAATCATAAAAGCAAAACTGTGGATGT
GGAGATTATTCTTTATCCACGTAAAAAAAATGCGATGGAACTCGGTGTGGGCTTTGCTACTGATGGCGGCGTTCACGGAC
AAATTGGCTGGACAAAACCTTGGATTAATAGCCGTGGACATAGTTTGCGTTCAAATCTTTATCTCTCTGCACCAAAACAA
ACTCTAGAGGCAACTTATCGAATGCCACTGCTTAAAAATCCATTAAATTATTACTATGATTTTGCCGTCGGTTGGGAAGG
GGAAAAAGAGAATGATACCAATACGAGAGTGCTTACGTTGTCAGCGTTACGTTATTGGAATAATGCGCATGGTTGGCAAT
ATTTTGGCGGACTTCGTACGCGATACGACAGTTTTACACAAGCGGATATCACTGATAAAACCTTACTTCTTTATCCAACT
GTTGGATTTACTCGTACTCGATTACGTGGTGGTTCCTTTGCCACTTGGGGCGATGTGCAAAAAATTACTTTTGATTTAAG
CAAACGAATTTGGCTATCAGAATCTTCTTTTATAAAAGTGCAAGCATCTAGCGCGTGGGTTCGTACTTATGCAGAAAATC
ATCGTATCGTTGCTCGTGCTGAAATCGGGTATTTACATACAAAAGATATTGAAAAAATTCCGCCTACACTGCGTTTCTTT
GCTGGTGGCGATCGTAGTGTGCGCGGTTACGGCTATAAAAAAATTGCGCCTAAAAATAAAAACGGAAAATTGGTGGGTGG
TTCGCGATTGCTTACCACTTCTTTAGAATATCAATATCAAGTTTATCCGAATTGGTGGGCGGCAACTTTTGCAGATAGTG
GATTAGCTGCCGATAATTACACGGCAAAAGAATTGCGTTATGGCGCAGGCGTTGGTGTGCGTTGGGCATCCCCAGTGGGT
GCGATTAAATTTGATATTGCCACCCCGATTCGTGATAAAGATAACAGCAAAAATATTCAATTTTACATCGGACTTGGTAC
AGAAATTTAA

Upstream 100 bases:

>100_bases
ATTTACCGCACTTTGGCAATGAAGTGCGGTATTTCTTTATTAAAACCAGACAAAATCTGTTGAAAATCTTGGATCCTAAC
GAACTTCTCGGTAGACTATA

Downstream 100 bases:

>100_bases
GGTGAATTTATGACAGAACAAATACAAGCATCAGAAACTTCACCAAAATCACCTGAGAAACCTAATAAAAAACATTGGGT
ACGCAAGGCTGTTTGTATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MQFTQKILALKMKKISLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVD
RGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFDALRKNLPKEGVLVEHQTYDDYKT
AISRLALNRGYFDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLT
SDFSSSNWFSSVLVQPNVNHKSKTVDVEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQ
TLEATYRMPLLKNPLNYYYDFAVGWEGEKENDTNTRVLTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPT
VGFTRTRLRGGSFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWVRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFF
AGGDRSVRGYGYKKIAPKNKNGKLVGGSRLLTTSLEYQYQVYPNWWAATFADSGLAADNYTAKELRYGAGVGVRWASPVG
AIKFDIATPIRDKDNSKNIQFYIGLGTEI

Sequences:

>Translated_589_residues
MQFTQKILALKMKKISLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVD
RGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFDALRKNLPKEGVLVEHQTYDDYKT
AISRLALNRGYFDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLT
SDFSSSNWFSSVLVQPNVNHKSKTVDVEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQ
TLEATYRMPLLKNPLNYYYDFAVGWEGEKENDTNTRVLTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPT
VGFTRTRLRGGSFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWVRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFF
AGGDRSVRGYGYKKIAPKNKNGKLVGGSRLLTTSLEYQYQVYPNWWAATFADSGLAADNYTAKELRYGAGVGVRWASPVG
AIKFDIATPIRDKDNSKNIQFYIGLGTEI
>Mature_589_residues
MQFTQKILALKMKKISLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVD
RGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFDALRKNLPKEGVLVEHQTYDDYKT
AISRLALNRGYFDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLT
SDFSSSNWFSSVLVQPNVNHKSKTVDVEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQ
TLEATYRMPLLKNPLNYYYDFAVGWEGEKENDTNTRVLTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPT
VGFTRTRLRGGSFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWVRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFF
AGGDRSVRGYGYKKIAPKNKNGKLVGGSRLLTTSLEYQYQVYPNWWAATFADSGLAADNYTAKELRYGAGVGVRWASPVG
AIKFDIATPIRDKDNSKNIQFYIGLGTEI

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=570, Percent_Identity=42.9824561403509, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 67074; Mature: 67074

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFTQKILALKMKKISLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHCCCCEEEEE
NKEEMDGSERYQHLVTKAVDRGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIA
CHHCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCCCEEC
GTDVQIEGEAAQDENFDALRKNLPKEGVLVEHQTYDDYKTAISRLALNRGYFDGNFKISR
CCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCEEEEE
LEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLT
EEECCHHHHHHHHHHHHCCCEEEECCEEEEHHHHHHHHHHHEEECCCCCCHHHCCHHHHH
SDFSSSNWFSSVLVQPNVNHKSKTVDVEIILYPRKKNAMELGVGFATDGGVHGQIGWTKP
HHCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEECEEECCCCCCCCCCCCCC
WINSRGHSLRSNLYLSAPKQTLEATYRMPLLKNPLNYYYDFAVGWEGEKENDTNTRVLTL
CCCCCCCCHHCCEEEECCHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
SALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGGSFATWGDVQ
EEEHHCCCCCCEEHHCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCE
KITFDLSKRIWLSESSFIKVQASSAWVRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFF
EEEEEHHCEEEECCCCEEEEEECCCEEHHHHCCCEEEEEEEECEEECCCHHHCCCCEEEE
AGGDRSVRGYGYKKIAPKNKNGKLVGGSRLLTTSLEYQYQVYPNWWAATFADSGLAADNY
ECCCCCCCCCCEEECCCCCCCCEEEECCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCC
TAKELRYGAGVGVRWASPVGAIKFDIATPIRDKDNSKNIQFYIGLGTEI
CHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MQFTQKILALKMKKISLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHCCCCEEEEE
NKEEMDGSERYQHLVTKAVDRGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIA
CHHCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCCEEEEEECCCCCCEEC
GTDVQIEGEAAQDENFDALRKNLPKEGVLVEHQTYDDYKTAISRLALNRGYFDGNFKISR
CCEEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCEEEEE
LEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLT
EEECCHHHHHHHHHHHHCCCEEEECCEEEEHHHHHHHHHHHEEECCCCCCHHHCCHHHHH
SDFSSSNWFSSVLVQPNVNHKSKTVDVEIILYPRKKNAMELGVGFATDGGVHGQIGWTKP
HHCCCCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEECEEECCCCCCCCCCCCCC
WINSRGHSLRSNLYLSAPKQTLEATYRMPLLKNPLNYYYDFAVGWEGEKENDTNTRVLTL
CCCCCCCCHHCCEEEECCHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
SALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGGSFATWGDVQ
EEEHHCCCCCCEEHHCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCE
KITFDLSKRIWLSESSFIKVQASSAWVRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFF
EEEEEHHCEEEECCCCEEEEEECCCEEHHHHCCCEEEEEEEECEEECCCHHHCCCCEEEE
AGGDRSVRGYGYKKIAPKNKNGKLVGGSRLLTTSLEYQYQVYPNWWAATFADSGLAADNY
ECCCCCCCCCCEEECCCCCCCCEEEECCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCC
TAKELRYGAGVGVRWASPVGAIKFDIATPIRDKDNSKNIQFYIGLGTEI
CHHHHHHCCCCCEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]