Click here to switch to the map view.

The map label for this gene is glpQ [H]

Identifier: 148827861

GI number: 148827861

Start: 1227741

End: 1228835

Strand: Direct

Name: glpQ [H]

Synonym: CGSHiGG_06735

Alternate gene names: 148827861

Gene position: 1227741-1228835 (Clockwise)

Preceding gene: 148827860

Following gene: 148827862

Centisome position: 65.06

GC content: 36.8

Gene sequence:

>1095_bases
ATGAAACTTAAAACTTTAGCCCTTTCTTTATTAGCAACCGGCGTACTTGCAGGTTGTAGCAGCCATTCATCAAGCATGGC
AAATACCCAAATGAAATCTCACAAAATCATCATTGCTCACCGTGGTGCTAGCGGTTATTTACCAGAGCATACGTTAGAAT
CTAAAGCACTTGCGTTTGCACAGCACGCTGATTACTTAGAGCAAGATTTAGCAATGACTAAAGATGGTCGTTTAGTGGTT
ATTCACGATCACTTTTTAGATGGCTTGACTGATGTTGCGAAAAAATTCCCACATCGTCACCGTAAAGATGGTCGTTACTA
TGTTATCGACTTTACCTTAAAAGAAATTCAAAGTTTAGAAATGACAGAAAACTTTGAAACCAAAGATGGCAAACAAGCAC
AAGTTTATCCCAATCGTTTCCCACTTTGGAAATCACATTTTAGAATTCACACCTTTGAAGATGAAATTGAATTTATCCAA
GGCTTAGAAAAATCTACTGGCAAAAAAGTAGGGATTTATCCAGAAATCAAAGCACCTTGGTTCCACCATCAAAATGGCAA
AGATATTGCCGCTGAAACACTCAAAGTGTTGAAAAAATATGGCTATGATAAGAAAACCGATATGGTTTACTTACAAACTT
TCGATTTTAATGAATTAAAACGTATCAAAACTGAATTACTTCCACAAATGGGTATGGATTTGAAATTAGTTCAATTAATT
GCCTATACAGACTGGAAAGAAACACAAGAAAAAGACTCAAAGGGTTATTGGGTAAACTATAATTACGACTGGATGTTTAA
ACCTGGCGCAATGGCAGAAGTGGTTAAATATGCCGATGGTGTTGGCCCGGGTTGGTATATGTTAGTTAATAAAGAAGAAT
CCAAACCTGATAATATTGTGTACACTCCGTTGGTAAAAGAACTTGCACAATATAATGTGGAACTGCATCCCTACACCGTG
CGTAAGGATGCACTACCCGCGTTTTTCACAGACGTAAATCAAATGTATGATGCATTATTGAATAAATCAGGGGCAACAGG
TGTATTTACTGATTTCCCAGATACTGGCGTGGAATTCTTAAAAGGAATAAAATAA

Upstream 100 bases:

>100_bases
GCTTAAAAAAGGCGGTGGGCAAATTGCTTAGTCGCCTTTTTTGTAACTAAAATCTAAAAACCTCATAAAAATTTACCGCA
CTCTCAAGGAGAAAATACTT

Downstream 100 bases:

>100_bases
TTTCTATTATAACCGTAGGTAAACATACCCACGGTTAACTAGGTTTCTATATCGTAGAAACTAAAAATCTACTCTAACAG
AGTAACATCATAATCAATCT

Product: glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase; Immunoglobulin D-binding protein; IgD-binding protein; Surface-exposed lipoprotein D; Protein D [H]

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MKLKTLALSLLATGVLAGCSSHSSSMANTQMKSHKIIIAHRGASGYLPEHTLESKALAFAQHADYLEQDLAMTKDGRLVV
IHDHFLDGLTDVAKKFPHRHRKDGRYYVIDFTLKEIQSLEMTENFETKDGKQAQVYPNRFPLWKSHFRIHTFEDEIEFIQ
GLEKSTGKKVGIYPEIKAPWFHHQNGKDIAAETLKVLKKYGYDKKTDMVYLQTFDFNELKRIKTELLPQMGMDLKLVQLI
AYTDWKETQEKDSKGYWVNYNYDWMFKPGAMAEVVKYADGVGPGWYMLVNKEESKPDNIVYTPLVKELAQYNVELHPYTV
RKDALPAFFTDVNQMYDALLNKSGATGVFTDFPDTGVEFLKGIK

Sequences:

>Translated_364_residues
MKLKTLALSLLATGVLAGCSSHSSSMANTQMKSHKIIIAHRGASGYLPEHTLESKALAFAQHADYLEQDLAMTKDGRLVV
IHDHFLDGLTDVAKKFPHRHRKDGRYYVIDFTLKEIQSLEMTENFETKDGKQAQVYPNRFPLWKSHFRIHTFEDEIEFIQ
GLEKSTGKKVGIYPEIKAPWFHHQNGKDIAAETLKVLKKYGYDKKTDMVYLQTFDFNELKRIKTELLPQMGMDLKLVQLI
AYTDWKETQEKDSKGYWVNYNYDWMFKPGAMAEVVKYADGVGPGWYMLVNKEESKPDNIVYTPLVKELAQYNVELHPYTV
RKDALPAFFTDVNQMYDALLNKSGATGVFTDFPDTGVEFLKGIK
>Mature_364_residues
MKLKTLALSLLATGVLAGCSSHSSSMANTQMKSHKIIIAHRGASGYLPEHTLESKALAFAQHADYLEQDLAMTKDGRLVV
IHDHFLDGLTDVAKKFPHRHRKDGRYYVIDFTLKEIQSLEMTENFETKDGKQAQVYPNRFPLWKSHFRIHTFEDEIEFIQ
GLEKSTGKKVGIYPEIKAPWFHHQNGKDIAAETLKVLKKYGYDKKTDMVYLQTFDFNELKRIKTELLPQMGMDLKLVQLI
AYTDWKETQEKDSKGYWVNYNYDWMFKPGAMAEVVKYADGVGPGWYMLVNKEESKPDNIVYTPLVKELAQYNVELHPYTV
RKDALPAFFTDVNQMYDALLNKSGATGVFTDFPDTGVEFLKGIK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols. Has a specific affinity for human immunoglobulin D myeloma protein [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Escherichia coli, GI1788572, Length=360, Percent_Identity=63.0555555555556, Blast_Score=484, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 41801; Mature: 41801

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKTLALSLLATGVLAGCSSHSSSMANTQMKSHKIIIAHRGASGYLPEHTLESKALAFA
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
QHADYLEQDLAMTKDGRLVVIHDHFLDGLTDVAKKFPHRHRKDGRYYVIDFTLKEIQSLE
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHH
MTENFETKDGKQAQVYPNRFPLWKSHFRIHTFEDEIEFIQGLEKSTGKKVGIYPEIKAPW
HCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCC
FHHQNGKDIAAETLKVLKKYGYDKKTDMVYLQTFDFNELKRIKTELLPQMGMDLKLVQLI
EECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH
AYTDWKETQEKDSKGYWVNYNYDWMFKPGAMAEVVKYADGVGPGWYMLVNKEESKPDNIV
HHCCCHHHHHCCCCCEEEEECEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEE
YTPLVKELAQYNVELHPYTVRKDALPAFFTDVNQMYDALLNKSGATGVFTDFPDTGVEFL
ECHHHHHHHHCCCEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHH
KGIK
HCCC
>Mature Secondary Structure
MKLKTLALSLLATGVLAGCSSHSSSMANTQMKSHKIIIAHRGASGYLPEHTLESKALAFA
CCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHH
QHADYLEQDLAMTKDGRLVVIHDHFLDGLTDVAKKFPHRHRKDGRYYVIDFTLKEIQSLE
HHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHH
MTENFETKDGKQAQVYPNRFPLWKSHFRIHTFEDEIEFIQGLEKSTGKKVGIYPEIKAPW
HCCCCCCCCCCEEEECCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCCC
FHHQNGKDIAAETLKVLKKYGYDKKTDMVYLQTFDFNELKRIKTELLPQMGMDLKLVQLI
EECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHH
AYTDWKETQEKDSKGYWVNYNYDWMFKPGAMAEVVKYADGVGPGWYMLVNKEESKPDNIV
HHCCCHHHHHCCCCCEEEEECEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEE
YTPLVKELAQYNVELHPYTVRKDALPAFFTDVNQMYDALLNKSGATGVFTDFPDTGVEFL
ECHHHHHHHHCCCEECCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHH
KGIK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 1987023; 8104899; 7822043; 1548059 [H]