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The map label for this gene is yeaW [H]

Identifier: 148824355

GI number: 148824355

Start: 3543113

End: 3544261

Strand: Reverse

Name: yeaW [H]

Synonym: TBFG_13182

Alternate gene names: 148824355

Gene position: 3544261-3543113 (Counterclockwise)

Preceding gene: 148824356

Following gene: 148824354

Centisome position: 80.11

GC content: 62.4

Gene sequence:

>1149_bases
ATGTTATCAACTGATAACCGAGCCGAGCTCGGAGACATCCTTACCGACATCGGGGATTACCTCGACGACAATCCACCGGC
GCTAAGCCTGCCGCCGGCCGCCTACACCTCATCGGAGCTGTGGCAGCTGGAGCGGGAACGGATCTTCAACCGGTCCTGGA
TGCTTGTCGCGCATGTCGACCAAGTCGCCAAGACCGGTGACTACGTCACCGTGTCCGTCGCAGGGGAGCCGGTCATGGTG
GTGCGGGACGTCGACGGGCAGCTGCACGCTCTTTCGCCGATCTGCCGGCACCGGTTGATGCTGATGGTGGAACCCGGTGC
GGGGCGCATCGACACGTTGACCTGCCAATACCACCTGTGGCGCTATGGGCTGGATGGCCGGTTGCGCGGAGCGCCCCATA
TGGCCGCCAACTTAGACTTCAACCGTAGGGAGTGCCGGCTTCCGCAGTTCGCCGTGGCCACCTGGAATGGATTGGTGTGG
ATCAACCTGGATGCCGATGCCGAACCAATCGCGGCGCATCTGGACCTGACTGACGACGAATTCGCCGGCTATCGGCTCGG
TGAGATGGTGCAGGTCGAGTCGTGGTCGCATGAGTGGCGAGCTAATTGGAAGGTGGCGGCGGAAAATGGTCATGAGAACT
ACCACGTGCTCGGCCTGCATCGCCAAACCCTGGAGCCGTTCGTTCCTGGTGGGGGCGATCTGGACGTTCGGCAGTATTCG
CGGTGGGCGTTGCGCCTCAGGGTTCCCTTCACCGTTCCAGTAGAAGCGAAGTCGTTGCAGCTCAACGAGGTTCAGAAAAG
TAATCTGGTCGTGTTGTGGACGTTTCCGAACAGCGCGCTGGCCATAGCGGGCGAGCGGGTGGTGTGGTTCGGCTTTATTC
CGCAAAGCATCGACCGGGTGCAGGTGCTCGGCGGCGTGCTCACCACCCCCGAGTTAGCCGCCGATGCGGCAGCAACAGCT
CAGACGTCGCAGTTCGTGATGGCGATGATCAATGACGAGGACCGGCTCGGACTGGAGGCCGTGCAGGTTGGGGCGGGCTC
GCGATTCGCCGAACGGGGTCACCTTAGCTCGAAAGAATGGCCCGGCATGCTCGCGTTCTACCGGAACCTCGCCATGGCGC
TGGTTGGCGACCACCCAGGTGCCAGCTAG

Upstream 100 bases:

>100_bases
CGTGCTGGCCACCCGTCCGTTCTCGAGGTGAACCGCCGGCTGGCCGGTCGGGCCGGTGCGCGCTGTTGACAATCGGTTAT
CAGTCGATAACATGGAGGGT

Downstream 100 bases:

>100_bases
CCTTGCCGGCATGCCGAGGCAGGCCGGCCGCTGGAGCCCAACGGCACTCCGCATCCTGGGGGCCGCTGCCGAGCTCATCG
CGCTGCGGGGTTACAGCTCC

Product: dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLSTDNRAELGDILTDIGDYLDDNPPALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMV
VRDVDGQLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECRLPQFAVATWNGLVW
INLDADAEPIAAHLDLTDDEFAGYRLGEMVQVESWSHEWRANWKVAAENGHENYHVLGLHRQTLEPFVPGGGDLDVRQYS
RWALRLRVPFTVPVEAKSLQLNEVQKSNLVVLWTFPNSALAIAGERVVWFGFIPQSIDRVQVLGGVLTTPELAADAAATA
QTSQFVMAMINDEDRLGLEAVQVGAGSRFAERGHLSSKEWPGMLAFYRNLAMALVGDHPGAS

Sequences:

>Translated_382_residues
MLSTDNRAELGDILTDIGDYLDDNPPALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMV
VRDVDGQLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECRLPQFAVATWNGLVW
INLDADAEPIAAHLDLTDDEFAGYRLGEMVQVESWSHEWRANWKVAAENGHENYHVLGLHRQTLEPFVPGGGDLDVRQYS
RWALRLRVPFTVPVEAKSLQLNEVQKSNLVVLWTFPNSALAIAGERVVWFGFIPQSIDRVQVLGGVLTTPELAADAAATA
QTSQFVMAMINDEDRLGLEAVQVGAGSRFAERGHLSSKEWPGMLAFYRNLAMALVGDHPGAS
>Mature_382_residues
MLSTDNRAELGDILTDIGDYLDDNPPALSLPPAAYTSSELWQLERERIFNRSWMLVAHVDQVAKTGDYVTVSVAGEPVMV
VRDVDGQLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLWRYGLDGRLRGAPHMAANLDFNRRECRLPQFAVATWNGLVW
INLDADAEPIAAHLDLTDDEFAGYRLGEMVQVESWSHEWRANWKVAAENGHENYHVLGLHRQTLEPFVPGGGDLDVRQYS
RWALRLRVPFTVPVEAKSLQLNEVQKSNLVVLWTFPNSALAIAGERVVWFGFIPQSIDRVQVLGGVLTTPELAADAAATA
QTSQFVMAMINDEDRLGLEAVQVGAGSRFAERGHLSSKEWPGMLAFYRNLAMALVGDHPGAS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=333, Percent_Identity=26.4264264264264, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1788888, Length=216, Percent_Identity=31.4814814814815, Blast_Score=97, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42505; Mature: 42505

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTDNRAELGDILTDIGDYLDDNPPALSLPPAAYTSSELWQLERERIFNRSWMLVAHVD
CCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEHH
QVAKTGDYVTVSVAGEPVMVVRDVDGQLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLW
HHHHCCCEEEEEECCCCEEEEEECCCCEEHHCHHHCCEEEEEECCCCCCEEEEEEEEEEE
RYGLDGRLRGAPHMAANLDFNRRECRLPQFAVATWNGLVWINLDADAEPIAAHLDLTDDE
EECCCCEECCCCCEEECCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCC
FAGYRLGEMVQVESWSHEWRANWKVAAENGHENYHVLGLHRQTLEPFVPGGGDLDVRQYS
CCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHHCCCCCCCCCCCCHHCCC
RWALRLRVPFTVPVEAKSLQLNEVQKSNLVVLWTFPNSALAIAGERVVWFGFIPQSIDRV
EEEEEEECCEEECCCCCCEECCEECCCCEEEEEECCCCEEEEECCEEEEEECCCCHHHHH
QVLGGVLTTPELAADAAATAQTSQFVMAMINDEDRLGLEAVQVGAGSRFAERGHLSSKEW
HHHCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCC
PGMLAFYRNLAMALVGDHPGAS
CHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure
MLSTDNRAELGDILTDIGDYLDDNPPALSLPPAAYTSSELWQLERERIFNRSWMLVAHVD
CCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEHH
QVAKTGDYVTVSVAGEPVMVVRDVDGQLHALSPICRHRLMLMVEPGAGRIDTLTCQYHLW
HHHHCCCEEEEEECCCCEEEEEECCCCEEHHCHHHCCEEEEEECCCCCCEEEEEEEEEEE
RYGLDGRLRGAPHMAANLDFNRRECRLPQFAVATWNGLVWINLDADAEPIAAHLDLTDDE
EECCCCEECCCCCEEECCCCCHHHCCCCCEEEEEECCEEEEEECCCCCCEEEEECCCCCC
FAGYRLGEMVQVESWSHEWRANWKVAAENGHENYHVLGLHRQTLEPFVPGGGDLDVRQYS
CCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCEEEEEEEHHHCCCCCCCCCCCCHHCCC
RWALRLRVPFTVPVEAKSLQLNEVQKSNLVVLWTFPNSALAIAGERVVWFGFIPQSIDRV
EEEEEEECCEEECCCCCCEECCEECCCCEEEEEECCCCEEEEECCEEEEEECCCCHHHHH
QVLGGVLTTPELAADAAATAQTSQFVMAMINDEDRLGLEAVQVGAGSRFAERGHLSSKEW
HHHCCCCCCCHHHHHHHHHHHHCEEEEEEECCCCCCCEEEEEECCCCCHHHCCCCCCCCC
PGMLAFYRNLAMALVGDHPGAS
CHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]