Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is wbbJ [C]
Identifier: 148824225
GI number: 148824225
Start: 3405729
End: 3406583
Strand: Reverse
Name: wbbJ [C]
Synonym: TBFG_13050
Alternate gene names: 148824225
Gene position: 3406583-3405729 (Counterclockwise)
Preceding gene: 148824227
Following gene: 148824220
Centisome position: 76.99
GC content: 65.26
Gene sequence:
>855_bases GTGCCGATCACCGCCCCCGCGGGGGCGGCCACCGGCGTCACCTCGCGCGCCGATGCGCATTCTCAGATGCGCCGATACGC CCAAACAGGTCCGACAGCTAAGCTAAGCTCTGCGCCAATGACAACCATGTGGGGTGCTCCGCTTCACCGCAGGTGGCGAG GATCGCGGCTGCGCGACCCACGTCAGGCCAAGTTCCTCACGCTGGCATCGCTGAAATGGGTGCTTGCCAACCGCGCCTAC ACTCCGTGGTACCTGGTGCGCTACTGGCGGCTGTTGAGGTTCAAGCTGGCCAACCCGCACATCATCACCCGCGGCATGGT GTTTCTCGGCAAGGGTGTGGAGATCCACGCGACACCGGAACTAGCGCAACTGGAGATCGGCCGCTGGGTGCACATCGGGG ACAAGAACACGATCCGTGCCCACGAGGGCTCGCTGCGGTTCGGCGACAAGGTGGTGCTGGGCCGGGACAACGTCATCAAC ACCTATCTCGACATCGAGATCGGGGACTCGGTGCTAATGGCCGACTGGTGCTATATCTGCGATTTCGACCACCGGATGGA CGACATCACGCTGCCGATCAAAGACCAGGGCATCATCAAGAGTCCGGTGCGGATCGGGCCCGACACCTGGATCGGCGTGA AGGTGAGCGTGCTGCGCGGCACCACCATCGGACGGGGCTGCGTGCTCGGCTCGCACGCGGTGGTCCGCGGCGCAATTCCC GACTATTCGATCGCGGTCGGGGCGCCGGCCAAGGTGGTCAAGAACCGCCAGCTGTCCTGGGAGGCATCGGCCGCGCAGCG CGCTGAGCTAGCCGCTGCCTTGGCCGACATCGAACGCAAGAAGGCGGCCCGCTAG
Upstream 100 bases:
>100_bases GGTGGCGGTTCCCGGTTGTCCGTGGGCGTGTCGTGTACGTGGTGTAAGTGTCGTGAACGTCCTCAGTTTGGGCTCGTCAT CGGGTGTGGTGTGGGGCCGG
Downstream 100 bases:
>100_bases CCCCGAGCACCCTAAAGCCGATGGTGCTCCGGCGACCATCCACATCGGGTACGCGAAATTGGCTGCCGGGCAGCCGATTC CACGGTGAGCCTACTCGGGG
Product: transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MPITAPAGAATGVTSRADAHSQMRRYAQTGPTAKLSSAPMTTMWGAPLHRRWRGSRLRDPRQAKFLTLASLKWVLANRAY TPWYLVRYWRLLRFKLANPHIITRGMVFLGKGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVIN TYLDIEIGDSVLMADWCYICDFDHRMDDITLPIKDQGIIKSPVRIGPDTWIGVKVSVLRGTTIGRGCVLGSHAVVRGAIP DYSIAVGAPAKVVKNRQLSWEASAAQRAELAAALADIERKKAAR
Sequences:
>Translated_284_residues MPITAPAGAATGVTSRADAHSQMRRYAQTGPTAKLSSAPMTTMWGAPLHRRWRGSRLRDPRQAKFLTLASLKWVLANRAY TPWYLVRYWRLLRFKLANPHIITRGMVFLGKGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVIN TYLDIEIGDSVLMADWCYICDFDHRMDDITLPIKDQGIIKSPVRIGPDTWIGVKVSVLRGTTIGRGCVLGSHAVVRGAIP DYSIAVGAPAKVVKNRQLSWEASAAQRAELAAALADIERKKAAR >Mature_283_residues PITAPAGAATGVTSRADAHSQMRRYAQTGPTAKLSSAPMTTMWGAPLHRRWRGSRLRDPRQAKFLTLASLKWVLANRAYT PWYLVRYWRLLRFKLANPHIITRGMVFLGKGVEIHATPELAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINT YLDIEIGDSVLMADWCYICDFDHRMDDITLPIKDQGIIKSPVRIGPDTWIGVKVSVLRGTTIGRGCVLGSHAVVRGAIPD YSIAVGAPAKVVKNRQLSWEASAAQRAELAAALADIERKKAAR
Specific function: Putative O-Acetyltransferase That Transfers An O-Acetyl Group To The O Antigen. [C]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1788345, Length=122, Percent_Identity=36.8852459016393, Blast_Score=72, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: 2.3.1.- [C]
Molecular weight: Translated: 31466; Mature: 31335
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITAPAGAATGVTSRADAHSQMRRYAQTGPTAKLSSAPMTTMWGAPLHRRWRGSRLRDP CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHCCCCCCCC RQAKFLTLASLKWVLANRAYTPWYLVRYWRLLRFKLANPHIITRGMVFLGKGVEIHATPE HHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEECCEEEEECCC LAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINTYLDIEIGDSVLMADWCYIC CEEEECCCEEEECCCCEEEECCCCCEECCEEEECCCCEEEEEEEEEECCCEEEECEEEEE DFDHRMDDITLPIKDQGIIKSPVRIGPDTWIGVKVSVLRGTTIGRGCVLGSHAVVRGAIP CCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCEEECCCCEEECCCC DYSIAVGAPAKVVKNRQLSWEASAAQRAELAAALADIERKKAAR CCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PITAPAGAATGVTSRADAHSQMRRYAQTGPTAKLSSAPMTTMWGAPLHRRWRGSRLRDP CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCCHHHCCCCHHHHHCCCCCCCC RQAKFLTLASLKWVLANRAYTPWYLVRYWRLLRFKLANPHIITRGMVFLGKGVEIHATPE HHHHEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEEECCEEEEECCC LAQLEIGRWVHIGDKNTIRAHEGSLRFGDKVVLGRDNVINTYLDIEIGDSVLMADWCYIC CEEEECCCEEEECCCCEEEECCCCCEECCEEEECCCCEEEEEEEEEECCCEEEECEEEEE DFDHRMDDITLPIKDQGIIKSPVRIGPDTWIGVKVSVLRGTTIGRGCVLGSHAVVRGAIP CCCCCCCCEEEEECCCCCCCCCCEECCCCEEEEEEEEEECCCCCCCEEECCCCEEECCCC DYSIAVGAPAKVVKNRQLSWEASAAQRAELAAALADIERKKAAR CCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]