Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is ilvB1
Identifier: 148824193
GI number: 148824193
Start: 3372839
End: 3374695
Strand: Reverse
Name: ilvB1
Synonym: TBFG_13018
Alternate gene names: 148824193
Gene position: 3374695-3372839 (Counterclockwise)
Preceding gene: 148824195
Following gene: 148824192
Centisome position: 76.27
GC content: 67.64
Gene sequence:
>1857_bases GTGAGCGCACCAACCAAGCCACACTCACCGACATTCAAGCCAGAGCCACACAGCGCGGCGAATGAGCCAAAGCACCCGGC GGCTCGTCCGAAACATGTTGCACTGCAGCAGCTTACCGGTGCACAGGCGGTCATCCGGTCGCTGGAGGAACTCGGCGTCG ACGTCATTTTCGGGATTCCGGGCGGTGCGGTGCTGCCGGTGTATGACCCGCTGTTCGACTCGAAAAAGCTGCGCCACGTG CTGGTCCGCCACGAACAGGGCGCCGGGCATGCCGCCAGCGGCTACGCGCACGTCACCGGCCGGGTGGGCGTGTGCATGGC AACGTCGGGTCCCGGAGCGACCAACCTGGTGACCCCGCTGGCCGACGCGCAGATGGACTCGATCCCGGTGGTCGCTATCA CCGGTCAGGTCGGGCGGGGGCTGATCGGCACCGACGCCTTCCAGGAGGCCGACATCTCGGGCATCACGATGCCGATCACC AAGCACAACTTTCTGGTCCGCTCCGGTGACGACATTCCGCGGGTGCTGGCCGAGGCCTTCCACATCGCGGCCTCCGGCCG TCCGGGCGCGGTGCTGGTCGACATCCCCAAGGACGTGCTGCAGGGCCAGTGCACGTTCAGCTGGCCGCCGCGGATGGAGC TGCCCGGCTACAAGCCCAACACCAAACCGCACAGCCGGCAGGTCCGCGAGGCCGCCAAGCTGATCGCGGCCGCGCGCAAG CCGGTGCTGTATGTCGGCGGCGGCGTCATCCGCGGTGAGGCCACCGAGCAGCTCCGGGAGCTGGCCGAGCTGACCGGCAT CCCGGTGGTCACCACGCTGATGGCCCGCGGCGCGTTTCCCGACAGCCACCGGCAAAACCTCGGCATGCCCGGCATGCACG GCACGGTGGCCGCCGTGGCGGCGCTGCAGCGCAGCGACCTGCTGATCGCGCTGGGTACCCGCTTCGACGACCGGGTGACC GGCAAGCTCGACTCGTTCGCGCCGGAAGCCAAGGTCATCCACGCCGACATCGACCCGGCCGAGATCGGCAAGAACCGCCA CGCCGACGTGCCCATCGTCGGTGACGTCAAGGCCGTCATCACCGAACTGATCGCGATGCTGCGCCACCACCACATTCCCG GCACCATCGAGATGGCCGACTGGTGGGCATACCTGAACGGTGTGCGCAAGACCTATCCGCTGAGCTATGGGCCGCAGAGC GACGGCAGCCTGAGCCCGGAATACGTGATCGAAAAGCTCGGCGAGATCGCCGGGCCGGACGCCGTCTTCGTCGCCGGCGT CGGCCAGCACCAGATGTGGGCCGCGCAGTTCATCAGATACGAAAAGCCGCGCAGCTGGCTGAACTCCGGCGGTCTGGGCA CCATGGGGTTTGCCATCCCGGCGGCCATGGGCGCCAAGATCGCCCTCCCCGGCACCGAGGTCTGGGCGATCGACGGCGAC GGTTGCTTCCAGATGACCAACCAGGAGCTGGCCACCTGCGCGGTCGAGGGCATACCGGTCAAGGTGGCGCTGATCAACAA CGGCAACCTGGGCATGGTGCGGCAGTGGCAGAGCCTGTTCTATGCCGAGCGGTACTCGCAGACCGACCTGGCCACTCATT CGCACCGCATCCCCGACTTCGTGAAACTGGCCGAGGCCTTGGGGTGTGTGGGGTTGCGGTGCGAGCGGGAAGAGGACGTC GTCGACGTCATCAACCAGGCGCGGGCGATCAACGACTGCCCGGTGGTGATCGACTTCATCGTCGGTGCCGACGCGCAAGT GTGGCCGATGGTGGCCGCGGGCACCAGCAATGACGAGATCCAGGCCGCCCGCGGCATTCGCCCCCTGTTCGACGACATCA CCGAAGGCCACGCCTGA
Upstream 100 bases:
>100_bases CAAGCGAGCACCAACGCGACCCTCGTGCAGCAGCTGAGCTGGCGAGGGTTTTTTCTTGTCCACCAACGAGACTTCCAGAG CAATAGAGGATCACACAACA
Downstream 100 bases:
>100_bases TGAGCCCGAAGACGCACACGTTGTCGGTGTTGGTCGAAGACAAGCCCGGCGTGCTGGCGCGGGTGGCGGCGCTGTTCTCC CGGCGCGGTTTCAACATCGA
Product: acetolactate synthase 1 catalytic subunit
Products: NA
Alternate protein names: ALS; Acetohydroxy-acid synthase large subunit; AHAS
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MSAPTKPHSPTFKPEPHSAANEPKHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIPGGAVLPVYDPLFDSKKLRHV LVRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPIT KHNFLVRSGDDIPRVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRMELPGYKPNTKPHSRQVREAAKLIAAARK PVLYVGGGVIRGEATEQLRELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVAALQRSDLLIALGTRFDDRVT GKLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVITELIAMLRHHHIPGTIEMADWWAYLNGVRKTYPLSYGPQS DGSLSPEYVIEKLGEIAGPDAVFVAGVGQHQMWAAQFIRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGD GCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDFVKLAEALGCVGLRCEREEDV VDVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDITEGHA
Sequences:
>Translated_618_residues MSAPTKPHSPTFKPEPHSAANEPKHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIPGGAVLPVYDPLFDSKKLRHV LVRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPIT KHNFLVRSGDDIPRVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRMELPGYKPNTKPHSRQVREAAKLIAAARK PVLYVGGGVIRGEATEQLRELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVAALQRSDLLIALGTRFDDRVT GKLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVITELIAMLRHHHIPGTIEMADWWAYLNGVRKTYPLSYGPQS DGSLSPEYVIEKLGEIAGPDAVFVAGVGQHQMWAAQFIRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGD GCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDFVKLAEALGCVGLRCEREEDV VDVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDITEGHA >Mature_617_residues SAPTKPHSPTFKPEPHSAANEPKHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIPGGAVLPVYDPLFDSKKLRHVL VRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPLADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITK HNFLVRSGDDIPRVLAEAFHIAASGRPGAVLVDIPKDVLQGQCTFSWPPRMELPGYKPNTKPHSRQVREAAKLIAAARKP VLYVGGGVIRGEATEQLRELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVAALQRSDLLIALGTRFDDRVTG KLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVITELIAMLRHHHIPGTIEMADWWAYLNGVRKTYPLSYGPQSD GSLSPEYVIEKLGEIAGPDAVFVAGVGQHQMWAAQFIRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGDG CFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDFVKLAEALGCVGLRCEREEDVV DVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEIQAARGIRPLFDDITEGHA
Specific function: Catalyzes the conversion of 2 pyruvate molecules into acetolactate in the first common step of the biosynthetic pathway of the branched-amino acids such as leucine, isoleucine, and valine. Also involved in condensing pyruvate and 2-ketobutyrate to form 2-
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family
Homologues:
Organism=Homo sapiens, GI93004078, Length=574, Percent_Identity=28.0487804878049, Blast_Score=186, Evalue=5e-47, Organism=Homo sapiens, GI21361361, Length=597, Percent_Identity=27.4706867671692, Blast_Score=157, Evalue=2e-38, Organism=Escherichia coli, GI87081685, Length=581, Percent_Identity=46.1273666092943, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1790104, Length=569, Percent_Identity=44.1124780316344, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1786717, Length=557, Percent_Identity=36.4452423698384, Blast_Score=345, Evalue=5e-96, Organism=Escherichia coli, GI1787096, Length=559, Percent_Identity=28.4436493738819, Blast_Score=200, Evalue=2e-52, Organism=Escherichia coli, GI1788716, Length=568, Percent_Identity=27.6408450704225, Blast_Score=179, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17531301, Length=567, Percent_Identity=25.7495590828924, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17531299, Length=567, Percent_Identity=25.7495590828924, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17542570, Length=510, Percent_Identity=27.6470588235294, Blast_Score=137, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323755, Length=619, Percent_Identity=42.4878836833603, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6320816, Length=493, Percent_Identity=23.5294117647059, Blast_Score=110, Evalue=5e-25, Organism=Saccharomyces cerevisiae, GI6323163, Length=501, Percent_Identity=21.9560878243513, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6321524, Length=504, Percent_Identity=22.2222222222222, Blast_Score=81, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6323073, Length=501, Percent_Identity=22.5548902195609, Blast_Score=80, Evalue=8e-16, Organism=Drosophila melanogaster, GI19922626, Length=569, Percent_Identity=26.5377855887522, Blast_Score=187, Evalue=1e-47,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): ILVB1_MYCTU (P0A622)
Other databases:
- EMBL: BX842581 - EMBL: AE000516 - PIR: F70855 - RefSeq: NP_337598.1 - RefSeq: YP_177917.1 - ProteinModelPortal: P0A622 - SMR: P0A622 - EnsemblBacteria: EBMYCT00000003781 - EnsemblBacteria: EBMYCT00000072990 - GeneID: 887286 - GeneID: 926690 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT3083 - KEGG: mtu:Rv3003c - TIGR: MT3083 - TubercuList: Rv3003c - GeneTree: EBGT00050000014643 - HOGENOM: HBG323037 - OMA: DVAVCMA - ProtClustDB: PRK07789 - BRENDA: 2.2.1.6 - GO: GO:0040007 - InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 - TIGRFAMs: TIGR00118
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N
EC number: =2.2.1.6
Molecular weight: Translated: 66123; Mature: 65992
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00187 TPP_ENZYMES
Important sites: BINDING 85-85 BINDING 187-187
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTKPHSPTFKPEPHSAANEPKHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECC GGAVLPVYDPLFDSKKLRHVLVRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPL CCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCC ADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVRSGDDIPRVLAEAF CCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHH HIAASGRPGAVLVDIPKDVLQGQCTFSWPPRMELPGYKPNTKPHSRQVREAAKLIAAARK HHHCCCCCCEEEEECCHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC PVLYVGGGVIRGEATEQLRELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVA CEEEECCEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHH ALQRSDLLIALGTRFDDRVTGKLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVI HHHHCCEEEEECCCCCCHHCCCHHHCCCCCEEEECCCCHHHCCCCCCCCCCEECCHHHHH TELIAMLRHHHIPGTIEMADWWAYLNGVRKTYPLSYGPQSDGSLSPEYVIEKLGEIAGPD HHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AVFVAGVGQHQMWAAQFIRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGD EEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCEEECCCCEEEEECCC GCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDF CCEEECCHHHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHH VKLAEALGCVGLRCEREEDVVDVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEI HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCHH QAARGIRPLFDDITEGHA HHHHCCCHHHHHHHCCCC >Mature Secondary Structure SAPTKPHSPTFKPEPHSAANEPKHPAARPKHVALQQLTGAQAVIRSLEELGVDVIFGIP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEEECC GGAVLPVYDPLFDSKKLRHVLVRHEQGAGHAASGYAHVTGRVGVCMATSGPGATNLVTPL CCCEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCC ADAQMDSIPVVAITGQVGRGLIGTDAFQEADISGITMPITKHNFLVRSGDDIPRVLAEAF CCCCCCCCCEEEEECCCCCCCCCCCCHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHH HIAASGRPGAVLVDIPKDVLQGQCTFSWPPRMELPGYKPNTKPHSRQVREAAKLIAAARK HHHCCCCCCEEEEECCHHHHCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC PVLYVGGGVIRGEATEQLRELAELTGIPVVTTLMARGAFPDSHRQNLGMPGMHGTVAAVA CEEEECCEEEECHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHH ALQRSDLLIALGTRFDDRVTGKLDSFAPEAKVIHADIDPAEIGKNRHADVPIVGDVKAVI HHHHCCEEEEECCCCCCHHCCCHHHCCCCCEEEECCCCHHHCCCCCCCCCCEECCHHHHH TELIAMLRHHHIPGTIEMADWWAYLNGVRKTYPLSYGPQSDGSLSPEYVIEKLGEIAGPD HHHHHHHHHCCCCCEEEHHHHHHHHHCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC AVFVAGVGQHQMWAAQFIRYEKPRSWLNSGGLGTMGFAIPAAMGAKIALPGTEVWAIDGD EEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCEEECCCCEEEEECCC GCFQMTNQELATCAVEGIPVKVALINNGNLGMVRQWQSLFYAERYSQTDLATHSHRIPDF CCEEECCHHHHHHEECCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCHHH VKLAEALGCVGLRCEREEDVVDVINQARAINDCPVVIDFIVGADAQVWPMVAAGTSNDEI HHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEECCCCCHH QAARGIRPLFDDITEGHA HHHHCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036