Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is PE_PGRS36 [H]
Identifier: 148824043
GI number: 148824043
Start: 3173762
End: 3175753
Strand: Direct
Name: PE_PGRS36 [H]
Synonym: TBFG_12868
Alternate gene names: 148824043
Gene position: 3173762-3175753 (Clockwise)
Preceding gene: 148824034
Following gene: 148824044
Centisome position: 71.73
GC content: 72.79
Gene sequence:
>1992_bases ATGACGTCCGCCTCCTGGGCCAGTAACCCTGTGCAGCGCGGGGCAGCCAACCCAAGACAATTACCCCGAAGCCCACAATG TGCGTCCCTGGCCGCCATAGAATCCGCACTATCCGCCCAGTCCGGTTCTTCTTGGGAGGTAACGATGTTGTATGTAGTTG CGTCACCCGACTTGATGACCGCGGCGGCTACCAATCTGGCGGAGATTGGTTCGGCGATCAGCACGGCAAATGGTGCGGCG GCACTCCCGACTGTTGAGGTGGTGGCCGCGGCCGCCGACGAGGTGTCCACGCAGATCGCGGCTCTATTCGGAGCGCATGC CAGGAGCTACCAAACCCTCAGCACCCAGGCAGCGGCGTTTCATAGTCGGTTTGTGCAGGCGTTGACCACGGCCGCGGCTT CCTACGCCAGCGTAGAGGCCGCCAACGCGTCGCCACTTCAGGTTGCGCTAGACGTGATTAATGCGCCCGCCCAGACACTG CTCGGACGTCCGCTAATTGGTAACGGCGCCGACGGATCGACACCGGGGCAGGCCGGCGGGCCCGGCGGGTTGCTGTACGG CAACGGCGGTAATGGCGCCGCCGGTGGGCCCAACCAGGCCGGCGGCGCCGGCGGCAACGCCGGCTTGATCGGCAACGGCG GGGCGGGCGGCGCCGGGGGTGTTGGCGCGGTCGGCGGTAAAGGCGGCACGGGCGGCCTGCTATTCGGCAACGGCGGGGCC GGCGGGCAAGGCGGGCTCGGCCTCGCAGGTATCAACGGCGGCAGCGGCGGGCAGGGAGGCCACGGTGGCAACGCCATCCT GTTCGGCCAGGGCGGTGCCGGCGGGCCAGGTGGCACCGGCGCCATGGGCGTCGCCGGCACCAATCCCACCCCCATCGGCA CCGCAGCGCCTGGCAGCGACGGCGTAAATCAGATTGGGAACGGTGGTAACACGGACCTCACCGGCGGCGCCGGTGGCGAC GGCAATGCCGGCAGCACCACCGTGAACGGCGGCAACGGCGGTACCGGCGGCGCAGCTAGGAACTCATCTGGTGGTACCGG TAACTCCTTTGGTGGTGCCGGCGGCGCCGGAGGCGACGGCGCCAACGGCGGCGACGGTGGCGCTGGCGGGGAAGCCCTCA CCGAAGGCGGTGCCACCGCCGTTAGTGGTGCTGGTGGTAAGGGAGGTAACGCCGAGGCTTCCGGCGGCGCCGGCGGCAAC GGCGGCAAAGGTGGCTTTGCTCAGGCCACCACCAGCGTGACCGGGGGTAACGGCGGTAACGGTGGCAATGGCCACGACAG TAACGCGCCGGGCGGCGCTGGCGGCAGCGGTGGCGTCGGCGGTGACGGCGGCCGTGGCGGCCTGCTGGCCGGCAACGGCG GCACCGGCGGTGCCGGTGGCAACGGCGGTACCGGTGGCGCCGGTGCCCCCGGCGGTGCCGGCGGCGCCGGCGGCAAAGCC GACATCGCCAACAGCCTCGGCGACAATGCCACCGTAACCGGGGGCAATGGCGGGACAGGCGGAGACGGCGGCAGCGCGCT GGGCACCGGGGGGGCTGGGGGTGCCGGAGGTCTAGGTGGTCACGGGGGTGCAGGCGGGCTGCTGATTGGCAACGGCGGCG CCGGTGGCGCTGGCGGCCTCGGCGGTGCGGGCGGCGCCGGCGGTGCGGGCGGTGAGGGCGGTGCCGGCGGCGCCGGAGGC GAAGCTATTCCCGGCGGGGCGTCCACCAACTCCGCCGGCGGTGACGGAGGGGCGGGCGGTACTGGCGGCAATGGCGGTGA CGGCGGTGCCGGCGGAGCCCCCGGCCTCGGTGGCGCGGGCGGGGCCGGCGGATGGTTGATCGGCCAGTCGGGCAGCACCG GCGGCGGTGGCGCCGGCGGTGCCGGTGGTGCCGGAGGTGCCGGTGGCGCGGGCGGCAGCGGCGGTGCGGGTGGCCATGGC GACACTACCTCCGGCAAGAACGGTTCGTCTGGCACCGCGGGCTTCGACGGCAACCCCGGGCAGCCCGGCTGA
Upstream 100 bases:
>100_bases CCGATCAGCACGACGTCGGTTCTGGCTAGGTCTGACACCGGACGGTTGGTTCCTTCCTTGGCTGCGCCGCTCCCAGGTTA TCCCGACGGGTGTTAACACG
Downstream 100 bases:
>100_bases GCGGCACAAGATCTGAACGCGCTCTAAGCTGACCCCGTGACTGGCTGGGTGCCCGATGTGCTGCCCGGCTATTGGCAGTG CACAATTCCGCTCGGGCCGG
Product: PE-PGRS family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MTSASWASNPVQRGAANPRQLPRSPQCASLAAIESALSAQSGSSWEVTMLYVVASPDLMTAAATNLAEIGSAISTANGAA ALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTL LGRPLIGNGADGSTPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKGGTGGLLFGNGGA GGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNPTPIGTAAPGSDGVNQIGNGGNTDLTGGAGGD GNAGSTTVNGGNGGTGGAARNSSGGTGNSFGGAGGAGGDGANGGDGGAGGEALTEGGATAVSGAGGKGGNAEASGGAGGN GGKGGFAQATTSVTGGNGGNGGNGHDSNAPGGAGGSGGVGGDGGRGGLLAGNGGTGGAGGNGGTGGAGAPGGAGGAGGKA DIANSLGDNATVTGGNGGTGGDGGSALGTGGAGGAGGLGGHGGAGGLLIGNGGAGGAGGLGGAGGAGGAGGEGGAGGAGG EAIPGGASTNSAGGDGGAGGTGGNGGDGGAGGAPGLGGAGGAGGWLIGQSGSTGGGGAGGAGGAGGAGGAGGSGGAGGHG DTTSGKNGSSGTAGFDGNPGQPG
Sequences:
>Translated_663_residues MTSASWASNPVQRGAANPRQLPRSPQCASLAAIESALSAQSGSSWEVTMLYVVASPDLMTAAATNLAEIGSAISTANGAA ALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTL LGRPLIGNGADGSTPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKGGTGGLLFGNGGA GGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNPTPIGTAAPGSDGVNQIGNGGNTDLTGGAGGD GNAGSTTVNGGNGGTGGAARNSSGGTGNSFGGAGGAGGDGANGGDGGAGGEALTEGGATAVSGAGGKGGNAEASGGAGGN GGKGGFAQATTSVTGGNGGNGGNGHDSNAPGGAGGSGGVGGDGGRGGLLAGNGGTGGAGGNGGTGGAGAPGGAGGAGGKA DIANSLGDNATVTGGNGGTGGDGGSALGTGGAGGAGGLGGHGGAGGLLIGNGGAGGAGGLGGAGGAGGAGGEGGAGGAGG EAIPGGASTNSAGGDGGAGGTGGNGGDGGAGGAPGLGGAGGAGGWLIGQSGSTGGGGAGGAGGAGGAGGAGGSGGAGGHG DTTSGKNGSSGTAGFDGNPGQPG >Mature_662_residues TSASWASNPVQRGAANPRQLPRSPQCASLAAIESALSAQSGSSWEVTMLYVVASPDLMTAAATNLAEIGSAISTANGAAA LPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAFHSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLL GRPLIGNGADGSTPGQAGGPGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKGGTGGLLFGNGGAG GQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNPTPIGTAAPGSDGVNQIGNGGNTDLTGGAGGDG NAGSTTVNGGNGGTGGAARNSSGGTGNSFGGAGGAGGDGANGGDGGAGGEALTEGGATAVSGAGGKGGNAEASGGAGGNG GKGGFAQATTSVTGGNGGNGGNGHDSNAPGGAGGSGGVGGDGGRGGLLAGNGGTGGAGGNGGTGGAGAPGGAGGAGGKAD IANSLGDNATVTGGNGGTGGDGGSALGTGGAGGAGGLGGHGGAGGLLIGNGGAGGAGGLGGAGGAGGAGGEGGAGGAGGE AIPGGASTNSAGGDGGAGGTGGNGGDGGAGGAPGLGGAGGAGGWLIGQSGSTGGGGAGGAGGAGGAGGAGGSGGAGGHGD TTSGKNGSSGTAGFDGNPGQPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000084 [H]
Pfam domain/function: PF00934 PE [H]
EC number: NA
Molecular weight: Translated: 56099; Mature: 55968
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSASWASNPVQRGAANPRQLPRSPQCASLAAIESALSAQSGSSWEVTMLYVVASPDLMT CCCCCCCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH AAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGADGSTPGQAGG HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC PGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKGGTGGLLFGNGGA CCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC GGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNPTPIGTAAPGSD CCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVNQIGNGGNTDLTGGAGGDGNAGSTTVNGGNGGTGGAARNSSGGTGNSFGGAGGAGGDG CHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANGGDGGAGGEALTEGGATAVSGAGGKGGNAEASGGAGGNGGKGGFAQATTSVTGGNGGN CCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC GGNGHDSNAPGGAGGSGGVGGDGGRGGLLAGNGGTGGAGGNGGTGGAGAPGGAGGAGGKA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH DIANSLGDNATVTGGNGGTGGDGGSALGTGGAGGAGGLGGHGGAGGLLIGNGGAGGAGGL HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC GGAGGAGGAGGEGGAGGAGGEAIPGGASTNSAGGDGGAGGTGGNGGDGGAGGAPGLGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGWLIGQSGSTGGGGAGGAGGAGGAGGAGGSGGAGGHGDTTSGKNGSSGTAGFDGNPG CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPG CCC >Mature Secondary Structure TSASWASNPVQRGAANPRQLPRSPQCASLAAIESALSAQSGSSWEVTMLYVVASPDLMT CCCCCCCCHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHH AAATNLAEIGSAISTANGAAALPTVEVVAAAADEVSTQIAALFGAHARSYQTLSTQAAAF HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSRFVQALTTAAASYASVEAANASPLQVALDVINAPAQTLLGRPLIGNGADGSTPGQAGG HHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC PGGLLYGNGGNGAAGGPNQAGGAGGNAGLIGNGGAGGAGGVGAVGGKGGTGGLLFGNGGA CCCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC GGQGGLGLAGINGGSGGQGGHGGNAILFGQGGAGGPGGTGAMGVAGTNPTPIGTAAPGSD CCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVNQIGNGGNTDLTGGAGGDGNAGSTTVNGGNGGTGGAARNSSGGTGNSFGGAGGAGGDG CHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ANGGDGGAGGEALTEGGATAVSGAGGKGGNAEASGGAGGNGGKGGFAQATTSVTGGNGGN CCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC GGNGHDSNAPGGAGGSGGVGGDGGRGGLLAGNGGTGGAGGNGGTGGAGAPGGAGGAGGKA CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHH DIANSLGDNATVTGGNGGTGGDGGSALGTGGAGGAGGLGGHGGAGGLLIGNGGAGGAGGL HHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC GGAGGAGGAGGEGGAGGAGGEAIPGGASTNSAGGDGGAGGTGGNGGDGGAGGAPGLGGAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GAGGWLIGQSGSTGGGGAGGAGGAGGAGGAGGSGGAGGHGDTTSGKNGSSGTAGFDGNPG CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]