Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is ppsA [C]
Identifier: 148823263
GI number: 148823263
Start: 2306574
End: 2309138
Strand: Reverse
Name: ppsA [C]
Synonym: TBFG_12084
Alternate gene names: 148823263
Gene position: 2309138-2306574 (Counterclockwise)
Preceding gene: 148823264
Following gene: 148823261
Centisome position: 52.19
GC content: 67.37
Gene sequence:
>2565_bases GTGAGAATCGCCGTCACCGGGGCCAGCGGAGTTCTCGGCCGCGGCCTGACCGCCAGATTGCTGAGTCAGGGTCACGAGGT CGTCGGAATCGCACGTCATCGACCGGACAGCTGGCCGAGCTCAGCGGATTTCATTGCGGCCGATATCCGGGATGCCACCG CCGTCGAAAGTGCTATGACAGGTGCGGATGTGGTCGCGCATTGTGCGTGGGTGCGTGGCCGAAACGACCACATCAATATC GACGGCACCGCCAATGTCCTCAAGGCGATGGCCGAGACCGGAACCGGGCGCATCGTTTTCACGTCCAGCGGTCACCAACC CCGCGTCGAGCAGATGCTGGCCGACTGCGGCCTGGAATGGGTCGCCGTGCGCTGCGCGCTCATTTTCGGTCGAAATGTCG ACAACTGGGTGCAGCGGCTGTTTGCTCTGCCGGTGTTACCCGCCGGGTATGCTGATCGCGTCGTACAAGTCGTCCACTCC GACGACGCGCAGCGGCTGTTGGTTCGCGCGCTACTGGACACGGTAATCGACAGCGGCCCTGTTAATCTCGCCGCCCCTGG CGAGTTGACGTTTCGGCGCATTGCGGCCGCGCTCGGGCGGCCCATGGTGCCTATTGGCTCCCCAGTGCTACGACGTGTCA CCTCGTTCGCCGAACTCGAACTCCTGCACAGCGCGCCATTGATGGATGTCACGCTCCTGCGTGACCGCTGGGGATTCCAG CCGGCCTGGAACGCCGAGGAGTGTCTCGAAGACTTCACCCTGGCGGTGCGTGGCCGGATCGGTCTGGGAAAGCGAACATT TTCCCTGCCTTGGCGGCTGGCTAACATCCAGGACCTTCCGGCGGTCGACTCCCCGGCAGACGACGGTGTCGCACCCAGAT TGGCCGGCCCAGAAGGGGCCAACGGCGAGTTCGACACGCCGATCGACCCGCGCTTCCCGACCTATCTGGCCACCAACCTC TCGGAGGCGCTGCCCGGCCCGTTCTCGCCGTCGTCGGCATCGGTGACTGTGCGGGGCCTGCGTGCCGGCGGGGTGGGCAT CGCCGAGCGGCTGCGGCCCAGCGGGGTGATCCAGCGCGAAATCGCCATGCGGACCGTCGCGGTGTTCGCCCACCGGCTGT ACGGGGCCATCACGTCGGCGCATTTCATGGCAGCAACCGTCCCCTTCGCCAAGCCGGCGACGATCGTCAGCAACAGCGGG TTCTTCGGACCCAGCATGGCTTCGCTGCCCATCTTTGGCGCGCAGCGACCGCCATCGGAATCCAGCCGTGCCCGCAGGTG GTTACGTACGCTACGCAATATCGGGGTGTTCGGCGTCAACCTGGTGGGCCTGTCCGCCGGCTCACCCCGCGACACCGATG CCTATGTCGCCGACGTCGATCGCCTGGAGCGTCTCGCCTTCGATAACCTCGCTACCCACGACGACCGCCGGTTGTTGAGC CTGATCTTGTTGGCACGTGACCACGTCGTGCACGGCTGGGTGCTGGCCTCGGGGTCGTTCATGCTGTGTGCGGCGTTCAA CGTGTTGTTGCGAGGATTGTGCGGGCGGGACACCGCACCGGCGGCCGGGCCGGAGTTGGTCAGCGCGCGATCGGTGGAGG CGGTGCAGCGGCTGGTGGCCGCGGCACGGCGGGATCCGGTCGTGATTCGGTTGCTGGCCGAGCCGGGGGAGCGTCTGGAC AAGCTAGCTGTCGAGGCGCCGGAGTTCCATTCCGCGGTGCTGGCCGAGCTGACGCTGATCGGGCACCGCGGTCCGGCGGA AGTCGAGATGGCCGCCACCAGCTATGCCGACAACCCCGAGTTGCTGGTGCGGATGGTAGCCAAGACGCTACGTGCGGTGC CAGCGCCGCAACCGCCGACGCCGGTGATTCCGTTGCGGGCCAAGCCCGTTGCGTTGCTGGCGGCCCGCCAGCTCCGCGAC CGCGAGGTCCGCCGCGACAGGATGGTGCGTGCCATCTGGGTGCTGCGTGCTCTGCTGCGGGAGTACGGGCGCCGGCTGAC CGAGGCCGGCGTCTTCGACACCCCGGACGATGTGTTCTACCTCTTGGTCGATGAAATCGATGCGCTGCCGGCAGACGTGT CGGGGCTGGTGGCTCGGCGCCGTGCCGAACAGCGCAGGCTTGCCGGCATCGTTCCGCCCACGGTGTTCAGCGGAAGCTGG GAACCGTCGCCTTCGTCGGCGGCGGCGCTGGCAGCCGGGGACACTCTACGCGGAGTCGGCGTCTGCGGCGGACGGGTGCG CGGCCGGGTGCGGATCGTGCGTCCGGAGACCATCGACGATTTGCAGCCCGGCGAGATTCTGGTCGCCGAGGTCACCGACG TCGGATACACCGCGGCCTTCTGCTACGCCGCCGCCGTGGTGACCGAGCTCGGCGGCCCGATGTCACATGCCGCGGTGGTC GCCCGCGAGTTCGGATTCCCTTGCGTGGTCGACGCCCAGGGAGCTACCCGGTTTCTGCCACCAGGAGCATTGGTGGAGGT CGACGGGGCTACCGGGGAAATTCATGTGGTTGAGCTGGCGTCCGAAGATGGGCCGGCGCTTCCGGGAAGCGATCTCAGTC GCTGA
Upstream 100 bases:
>100_bases CAGGACCCGGCGTTGGCGCCGACCGCAGAACAAGAGATCGCGGACATGGACCTCGACGACCTGGTCAACGCGGCGTTTCG GAACGACGACGAGTAGGACC
Downstream 100 bases:
>100_bases ACCTAGTTCGTCGTGTCAGCTTGTGACGGGTGCACCTCAGCAGCCGAACGCAACGCCCACGCCGTCGGGTGGCGGCGCCG GCTTCAGGCAGCCGAACGGC
Product: hypothetical protein
Products: AMP; H+; Phosphoenolpyruvate; Phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 854; Mature: 854
Protein sequence:
>854_residues MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINI DGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHS DDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQ PAWNAEECLEDFTLAVRGRIGLGKRTFSLPWRLANIQDLPAVDSPADDGVAPRLAGPEGANGEFDTPIDPRFPTYLATNL SEALPGPFSPSSASVTVRGLRAGGVGIAERLRPSGVIQREIAMRTVAVFAHRLYGAITSAHFMAATVPFAKPATIVSNSG FFGPSMASLPIFGAQRPPSESSRARRWLRTLRNIGVFGVNLVGLSAGSPRDTDAYVADVDRLERLAFDNLATHDDRRLLS LILLARDHVVHGWVLASGSFMLCAAFNVLLRGLCGRDTAPAAGPELVSARSVEAVQRLVAAARRDPVVIRLLAEPGERLD KLAVEAPEFHSAVLAELTLIGHRGPAEVEMAATSYADNPELLVRMVAKTLRAVPAPQPPTPVIPLRAKPVALLAARQLRD REVRRDRMVRAIWVLRALLREYGRRLTEAGVFDTPDDVFYLLVDEIDALPADVSGLVARRRAEQRRLAGIVPPTVFSGSW EPSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVTDVGYTAAFCYAAAVVTELGGPMSHAAVV AREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELASEDGPALPGSDLSR
Sequences:
>Translated_854_residues MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINI DGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHS DDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQ PAWNAEECLEDFTLAVRGRIGLGKRTFSLPWRLANIQDLPAVDSPADDGVAPRLAGPEGANGEFDTPIDPRFPTYLATNL SEALPGPFSPSSASVTVRGLRAGGVGIAERLRPSGVIQREIAMRTVAVFAHRLYGAITSAHFMAATVPFAKPATIVSNSG FFGPSMASLPIFGAQRPPSESSRARRWLRTLRNIGVFGVNLVGLSAGSPRDTDAYVADVDRLERLAFDNLATHDDRRLLS LILLARDHVVHGWVLASGSFMLCAAFNVLLRGLCGRDTAPAAGPELVSARSVEAVQRLVAAARRDPVVIRLLAEPGERLD KLAVEAPEFHSAVLAELTLIGHRGPAEVEMAATSYADNPELLVRMVAKTLRAVPAPQPPTPVIPLRAKPVALLAARQLRD REVRRDRMVRAIWVLRALLREYGRRLTEAGVFDTPDDVFYLLVDEIDALPADVSGLVARRRAEQRRLAGIVPPTVFSGSW EPSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVTDVGYTAAFCYAAAVVTELGGPMSHAAVV AREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELASEDGPALPGSDLSR >Mature_854_residues MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMTGADVVAHCAWVRGRNDHINI DGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHS DDAQRLLVRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQ PAWNAEECLEDFTLAVRGRIGLGKRTFSLPWRLANIQDLPAVDSPADDGVAPRLAGPEGANGEFDTPIDPRFPTYLATNL SEALPGPFSPSSASVTVRGLRAGGVGIAERLRPSGVIQREIAMRTVAVFAHRLYGAITSAHFMAATVPFAKPATIVSNSG FFGPSMASLPIFGAQRPPSESSRARRWLRTLRNIGVFGVNLVGLSAGSPRDTDAYVADVDRLERLAFDNLATHDDRRLLS LILLARDHVVHGWVLASGSFMLCAAFNVLLRGLCGRDTAPAAGPELVSARSVEAVQRLVAAARRDPVVIRLLAEPGERLD KLAVEAPEFHSAVLAELTLIGHRGPAEVEMAATSYADNPELLVRMVAKTLRAVPAPQPPTPVIPLRAKPVALLAARQLRD REVRRDRMVRAIWVLRALLREYGRRLTEAGVFDTPDDVFYLLVDEIDALPADVSGLVARRRAEQRRLAGIVPPTVFSGSW EPSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVTDVGYTAAFCYAAAVVTELGGPMSHAAVV AREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELASEDGPALPGSDLSR
Specific function: ESSENTIAL STEP IN GLUCONEOGENESIS WHEN PYRUVATE AND LACTATE ARE USED AS A CARBON SOURCE. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family
Homologues:
Organism=Caenorhabditis elegans, GI17564524, Length=446, Percent_Identity=25.7847533632287, Blast_Score=142, Evalue=8e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2047_MYCTU (P65684)
Other databases:
- EMBL: BX842578 - EMBL: AE000516 - PIR: F70944 - RefSeq: NP_216563.1 - RefSeq: NP_336572.1 - ProteinModelPortal: P65684 - EnsemblBacteria: EBMYCT00000002549 - EnsemblBacteria: EBMYCT00000071835 - GeneID: 888529 - GeneID: 924639 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT2107 - KEGG: mtu:Rv2047c - TIGR: MT2107 - TubercuList: Rv2047c - GeneTree: EBGT00050000015187 - HOGENOM: HBG565212 - OMA: FIADVDR - ProtClustDB: PRK05865 - GO: GO:0016310 - InterPro: IPR001509 - InterPro: IPR016040 - InterPro: IPR008279 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:3.50.30.10
Pfam domain/function: PF01370 Epimerase; PF00391 PEP-utilizers; SSF52009 PEP_mobile
EC number: 2.7.9.2 [C]
Molecular weight: Translated: 91386; Mature: 91386
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMT CEEEEECCCCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHH GADVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEW HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHH VAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGP HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC VNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQ CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC PAWNAEECLEDFTLAVRGRIGLGKRTFSLPWRLANIQDLPAVDSPADDGVAPRLAGPEGA CCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC NGEFDTPIDPRFPTYLATNLSEALPGPFSPSSASVTVRGLRAGGVGIAERLRPSGVIQRE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCHHHHH IAMRTVAVFAHRLYGAITSAHFMAATVPFAKPATIVSNSGFFGPSMASLPIFGAQRPPSE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH SSRARRWLRTLRNIGVFGVNLVGLSAGSPRDTDAYVADVDRLERLAFDNLATHDDRRLLS HHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LILLARDHVVHGWVLASGSFMLCAAFNVLLRGLCGRDTAPAAGPELVSARSVEAVQRLVA HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AARRDPVVIRLLAEPGERLDKLAVEAPEFHSAVLAELTLIGHRGPAEVEMAATSYADNPE HHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCHH LLVRMVAKTLRAVPAPQPPTPVIPLRAKPVALLAARQLRDREVRRDRMVRAIWVLRALLR HHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYGRRLTEAGVFDTPDDVFYLLVDEIDALPADVSGLVARRRAEQRRLAGIVPPTVFSGSW HHHHHHHHCCCCCCCCHHEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVTDVGYTAAF CCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHH CYAAAVVTELGGPMSHAAVVAREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELA HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCCEEEECCCCCEEEEEEEE SEDGPALPGSDLSR CCCCCCCCCCCCCC >Mature Secondary Structure MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSADFIAADIRDATAVESAMT CEEEEECCCCCHHCCHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHH GADVVAHCAWVRGRNDHINIDGTANVLKAMAETGTGRIVFTSSGHQPRVEQMLADCGLEW HHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCHHH VAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGP HHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC VNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQ CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC PAWNAEECLEDFTLAVRGRIGLGKRTFSLPWRLANIQDLPAVDSPADDGVAPRLAGPEGA CCCCHHHHHHHHHHHHCCCCCCCCEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC NGEFDTPIDPRFPTYLATNLSEALPGPFSPSSASVTVRGLRAGGVGIAERLRPSGVIQRE CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHCCCCCHHHHH IAMRTVAVFAHRLYGAITSAHFMAATVPFAKPATIVSNSGFFGPSMASLPIFGAQRPPSE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCH SSRARRWLRTLRNIGVFGVNLVGLSAGSPRDTDAYVADVDRLERLAFDNLATHDDRRLLS HHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LILLARDHVVHGWVLASGSFMLCAAFNVLLRGLCGRDTAPAAGPELVSARSVEAVQRLVA HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH AARRDPVVIRLLAEPGERLDKLAVEAPEFHSAVLAELTLIGHRGPAEVEMAATSYADNPE HHCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCHH LLVRMVAKTLRAVPAPQPPTPVIPLRAKPVALLAARQLRDREVRRDRMVRAIWVLRALLR HHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYGRRLTEAGVFDTPDDVFYLLVDEIDALPADVSGLVARRRAEQRRLAGIVPPTVFSGSW HHHHHHHHCCCCCCCCHHEEEEEHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC EPSPSSAAALAAGDTLRGVGVCGGRVRGRVRIVRPETIDDLQPGEILVAEVTDVGYTAAF CCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCHHHHH CYAAAVVTELGGPMSHAAVVAREFGFPCVVDAQGATRFLPPGALVEVDGATGEIHVVELA HHHHHHHHHHCCCHHHHHHHHHHCCCCEEEECCCCCEECCCCCEEEECCCCCEEEEEEEE SEDGPALPGSDLSR CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+; Mn2+ [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 10.5 {phosphate}} 0.028 {ATP}} 0.083 {pyruvate}} [C]
Substrates: ATP; H2O; Pyruvate [C]
Specific reaction: ATP + H2O + Pyruvate --> AMP + (2) H+ + Phosphoenolpyruvate + Phosphate [C]
General reaction: Phospho group transfer [C]
Inhibitor: 2-Oxoglutarate; 3-Phosphoglyceraldehyde; 5'-Adenylyl methylen ediphosphonate; ADP; ADP glucose; AMP; ATP; Ca2+; F-; Iodoacetate; Malate; Mg2+; Mn2+; Oxalacetate; PCMB; Phosphoenolpyruvate; Sulfhydryl reagents [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036