| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is rsfB
Identifier: 148663550
GI number: 148663550
Start: 4137769
End: 4138137
Strand: Reverse
Name: rsfB
Synonym: MRA_3722
Alternate gene names: NA
Gene position: 4138137-4137769 (Counterclockwise)
Preceding gene: 148663551
Following gene: 148663549
Centisome position: 93.62
GC content: 58.27
Gene sequence:
>369_bases TTGTCAGCTCCCGACTCGATCACCGTCACGGTTGCCGACCATAACGGGGTCGCCGTGCTCAGCATCGGTGGTGAGATTGA TTTGATCACCGCTGCGGCACTTGAAGAGGCCATCGGCGAAGTTGTGGCCGACAATCCGACGGCGCTAGTCATCGACCTTT CCGCGGTGGAGTTTCTGGGGTCGGTGGGGCTGAAGATTTTGGCGGCAACATCCGAAAAGATAGGCCAATCCGTCAAGTTC GGGGTGGTTGCACGGGGTTCGGTAACCAGAAGGCCGATTCATCTGATGGGTCTGGACAAGACCTTTCGGTTGTTTTCCAC GCTCCACGATGCCTTGACTGGGGTACGGGGCGGCAGGATCGACCGGTAA
Upstream 100 bases:
>100_bases TCGTGTGCAGCCGGCAAATCCTACGCTGATGGGCCGCCGCCGCAGTTCGCAGGCGGGCTAGGCTTTCACCACACGGACGG CTCGGACAAGAGGATCGCCA
Downstream 100 bases:
>100_bases CGCCGTACAAACCGACGAGCATGCATGCTGTGATCGGCACCAGATAGTCGAGGCCTGCGGCGCACGCCACGTTGCCAGCG TGCCGCCGTGCGTGTCACGC
Product: anti-anti-sigma factor RsfB
Products: NA
Alternate protein names: Anti-Anti-Sigma Factor; Anti-Anti-Sigma Regulatory Factor; Anti-Anti-Sigma Factor RsfB
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MSAPDSITVTVADHNGVAVLSIGGEIDLITAAALEEAIGEVVADNPTALVIDLSAVEFLGSVGLKILAATSEKIGQSVKF GVVARGSVTRRPIHLMGLDKTFRLFSTLHDALTGVRGGRIDR
Sequences:
>Translated_122_residues MSAPDSITVTVADHNGVAVLSIGGEIDLITAAALEEAIGEVVADNPTALVIDLSAVEFLGSVGLKILAATSEKIGQSVKF GVVARGSVTRRPIHLMGLDKTFRLFSTLHDALTGVRGGRIDR >Mature_121_residues SAPDSITVTVADHNGVAVLSIGGEIDLITAAALEEAIGEVVADNPTALVIDLSAVEFLGSVGLKILAATSEKIGQSVKFG VVARGSVTRRPIHLMGLDKTFRLFSTLHDALTGVRGGRIDR
Specific function: Unknown
COG id: COG1366
COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12651; Mature: 12520
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDSITVTVADHNGVAVLSIGGEIDLITAAALEEAIGEVVADNPTALVIDLSAVEFLG CCCCCCEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH SVGLKILAATSEKIGQSVKFGVVARGSVTRRPIHLMGLDKTFRLFSTLHDALTGVRGGRI HCCEEEEEECCHHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC DR CC >Mature Secondary Structure SAPDSITVTVADHNGVAVLSIGGEIDLITAAALEEAIGEVVADNPTALVIDLSAVEFLG CCCCCEEEEEECCCCEEEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH SVGLKILAATSEKIGQSVKFGVVARGSVTRRPIHLMGLDKTFRLFSTLHDALTGVRGGRI HCCEEEEEECCHHHCCCEEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCC DR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA