| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148661064
Identifier: 148661064
GI number: 148661064
Start: 1427474
End: 1428727
Strand: Direct
Name: 148661064
Synonym: MRA_1285
Alternate gene names: NA
Gene position: 1427474-1428727 (Clockwise)
Preceding gene: 148661062
Following gene: 148661065
Centisome position: 32.3
GC content: 66.59
Gene sequence:
>1254_bases GTGAGTCCGCGCCCGGGACCTGCCGGGCGAGGTCCCGCGCCTTGTCGGTGTGCAGACCTACACTCGCTTTGCGTTGACAG CCACGCACTCAGGAGGGATGGGATGCGATTCCTGCACACTGCCGACTGGCAGCTCGGCATGACGCGTCACTTTCTCGCCG GTGACGCCCAGCCGCGATATTCTGCTGCCCGCCGTGACGCAGTCGCTGGACTAAAAGCGCTGGCCGCCGATGTGGGCGCC GAATTCGTCGTAGTCGCCGGTGACGTCTTCGAACACAATCAGCTCGCGCCACAGATAGTCGGTCAATCCTTGGAAGCCAT GCGCGTGATCGGCCTTCCGGTCTATCTGCTGCCGGGTAACCATGACCCGCTGGACGCTTCGTCGGTGTACACCAGCACGC TGTTTCGAGCCGAACGGCCGGACAACGTTGTGGTGCTCGACCGAGCTGGCGTCCACGAGGTCCGGCCGGGAGTCCAGATC GTCGCGGCGCCGTGGCGGTCCAAGGCGCCCACCACCGACCCGGTTGCCGAGGTGCTGGCCGGCCTGCCCACAGACGCCGC TATTCGGCTGCTCGTCGCCCATGGGGGTGTCGACGCGCTGGACCCCGACCACGACAAACCGTCGCTGATCAGGCTCGCCG CACTCGACGACGCGCTGACTCGACAGGCGATTCATTATGTGGCCCTAGGTGACAAACATTCGCTTACCCAGGTCGGCAGC AGCGGGCGGGTCTGGTACTCCGGTGCACCGGAAGTCACCAACTTCGACGACGTCGAACCGGACCCCGGTCACGTCCTAGT GGTCGACATCGACGAAAGCGACCCGCGACATCCCGTCACCGTCGACGCCCGTCGCATCGGCCGCTGGCGGTTCGTTACGT TGCACCACCAGGTCGACACCAGCCGGGACATCGCCGACCTGGACCTGAACCTGGATCTGATGACGGACAAGGACCGCACC GTGGTGCGGCTGGCCCTGACCGGTTCGCTGACGGTCACTGACCGCGCCGCATTGGATACCTGTCTGGACAAGTACGCGCG GTTGTTCGCCTGGCTGGGTCTGTGGGAACGTCACACCGACCTAGCGGTGATACCCGTCGACGCCGAGTTCACCGACCTCG GCATCGGGGGGTTCGCCGCCGCGGCCGTCGACGAGCTAGTCGCGACCGCGCGCGGGGGTGACGACGAGTCCGCCGTCGAT GCCCAGGCGGCGCTGGCACTGTTGCTGCGGCTCGCTGACCGGGGAGCGGCGTGA
Upstream 100 bases:
>100_bases GCGTCAGCCATAGGGCGCTGATAGGTAGGGCGAGCATTCTGTGCCCAAAGGATAGGGCTGGCATCGCCCGGGCAAGCACG GGCGGCATGCTGCCCCGCCG
Downstream 100 bases:
>100_bases AGCTGCACCGGCTGGCCCTGACCAATTACCGCGGCATCGCACACCGTGACGTCGAATTCCCCGATCATGGAGTGGTGGTG GTGTGCGGCGCCAACGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: DNA Repair Exonuclease; Exonuclease; Exonuclease SbcD; DNA Repair Protein RAD; Ser/Thr Protein Phosphatase Family Protein; Calcineurin-Like Phosphoesterase Family; Exonuclease SbcD Family Protein; DNA Repair Exonuclease Or Phosphoesterase; DNA Repair Exonuclease SbcD
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MSPRPGPAGRGPAPCRCADLHSLCVDSHALRRDGMRFLHTADWQLGMTRHFLAGDAQPRYSAARRDAVAGLKALAADVGA EFVVVAGDVFEHNQLAPQIVGQSLEAMRVIGLPVYLLPGNHDPLDASSVYTSTLFRAERPDNVVVLDRAGVHEVRPGVQI VAAPWRSKAPTTDPVAEVLAGLPTDAAIRLLVAHGGVDALDPDHDKPSLIRLAALDDALTRQAIHYVALGDKHSLTQVGS SGRVWYSGAPEVTNFDDVEPDPGHVLVVDIDESDPRHPVTVDARRIGRWRFVTLHHQVDTSRDIADLDLNLDLMTDKDRT VVRLALTGSLTVTDRAALDTCLDKYARLFAWLGLWERHTDLAVIPVDAEFTDLGIGGFAAAAVDELVATARGGDDESAVD AQAALALLLRLADRGAA
Sequences:
>Translated_417_residues MSPRPGPAGRGPAPCRCADLHSLCVDSHALRRDGMRFLHTADWQLGMTRHFLAGDAQPRYSAARRDAVAGLKALAADVGA EFVVVAGDVFEHNQLAPQIVGQSLEAMRVIGLPVYLLPGNHDPLDASSVYTSTLFRAERPDNVVVLDRAGVHEVRPGVQI VAAPWRSKAPTTDPVAEVLAGLPTDAAIRLLVAHGGVDALDPDHDKPSLIRLAALDDALTRQAIHYVALGDKHSLTQVGS SGRVWYSGAPEVTNFDDVEPDPGHVLVVDIDESDPRHPVTVDARRIGRWRFVTLHHQVDTSRDIADLDLNLDLMTDKDRT VVRLALTGSLTVTDRAALDTCLDKYARLFAWLGLWERHTDLAVIPVDAEFTDLGIGGFAAAAVDELVATARGGDDESAVD AQAALALLLRLADRGAA >Mature_416_residues SPRPGPAGRGPAPCRCADLHSLCVDSHALRRDGMRFLHTADWQLGMTRHFLAGDAQPRYSAARRDAVAGLKALAADVGAE FVVVAGDVFEHNQLAPQIVGQSLEAMRVIGLPVYLLPGNHDPLDASSVYTSTLFRAERPDNVVVLDRAGVHEVRPGVQIV AAPWRSKAPTTDPVAEVLAGLPTDAAIRLLVAHGGVDALDPDHDKPSLIRLAALDDALTRQAIHYVALGDKHSLTQVGSS GRVWYSGAPEVTNFDDVEPDPGHVLVVDIDESDPRHPVTVDARRIGRWRFVTLHHQVDTSRDIADLDLNLDLMTDKDRTV VRLALTGSLTVTDRAALDTCLDKYARLFAWLGLWERHTDLAVIPVDAEFTDLGIGGFAAAAVDELVATARGGDDESAVDA QAALALLLRLADRGAA
Specific function: Unknown
COG id: COG0420
COG function: function code L; DNA repair exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44791; Mature: 44660
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPRPGPAGRGPAPCRCADLHSLCVDSHALRRDGMRFLHTADWQLGMTRHFLAGDAQPRY CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCHH SAARRDAVAGLKALAADVGAEFVVVAGDVFEHNQLAPQIVGQSLEAMRVIGLPVYLLPGN HHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHCHHHHHHHHCCEEEEECCC HDPLDASSVYTSTLFRAERPDNVVVLDRAGVHEVRPGVQIVAAPWRSKAPTTDPVAEVLA CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCHHHHHHH GLPTDAAIRLLVAHGGVDALDPDHDKPSLIRLAALDDALTRQAIHYVALGDKHSLTQVGS CCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHEEEEEECCCCCHHHCCC SGRVWYSGAPEVTNFDDVEPDPGHVLVVDIDESDPRHPVTVDARRIGRWRFVTLHHQVDT CCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECHHHCCCEEEEEEEEECCC SRDIADLDLNLDLMTDKDRTVVRLALTGSLTVTDRAALDTCLDKYARLFAWLGLWERHTD CCCEEEEEEEEEEEECCCCEEEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC LAVIPVDAEFTDLGIGGFAAAAVDELVATARGGDDESAVDAQAALALLLRLADRGAA EEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SPRPGPAGRGPAPCRCADLHSLCVDSHALRRDGMRFLHTADWQLGMTRHFLAGDAQPRY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCHH SAARRDAVAGLKALAADVGAEFVVVAGDVFEHNQLAPQIVGQSLEAMRVIGLPVYLLPGN HHHHHHHHHHHHHHHHHCCCCEEEEECCHHCCCCCCHHHHHCHHHHHHHHCCEEEEECCC HDPLDASSVYTSTLFRAERPDNVVVLDRAGVHEVRPGVQIVAAPWRSKAPTTDPVAEVLA CCCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCHHHHHHH GLPTDAAIRLLVAHGGVDALDPDHDKPSLIRLAALDDALTRQAIHYVALGDKHSLTQVGS CCCCHHHEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHHHEEEEEECCCCCHHHCCC SGRVWYSGAPEVTNFDDVEPDPGHVLVVDIDESDPRHPVTVDARRIGRWRFVTLHHQVDT CCCEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECHHHCCCEEEEEEEEECCC SRDIADLDLNLDLMTDKDRTVVRLALTGSLTVTDRAALDTCLDKYARLFAWLGLWERHTD CCCEEEEEEEEEEEECCCCEEEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCC LAVIPVDAEFTDLGIGGFAAAAVDELVATARGGDDESAVDAQAALALLLRLADRGAA EEEEEECCCEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA