Click here to switch to the map view.

The map label for this gene is rpmC [H]

Identifier: 148660484

GI number: 148660484

Start: 806832

End: 807065

Strand: Direct

Name: rpmC [H]

Synonym: MRA_0717

Alternate gene names: 148660484

Gene position: 806832-807065 (Clockwise)

Preceding gene: 148660483

Following gene: 148660485

Centisome position: 18.25

GC content: 61.97

Gene sequence:

>234_bases
ATGGCAGTGGGTGTCTCGCCGGGCGAACTGCGTGAGCTCACCGACGAGGAGCTGGCCGAGCGGTTGCGCGAGTCCAAGGA
AGAGTTGTTCAACTTGCGTTTCCAGATGGCGACCGGCCAGCTCAACAATAACCGCCGGCTCCGTACGGTGCGTCAGGAAA
TCGCGCGCATCTACACCGTGCTGCGCGAACGAGAACTGGGTCTGGCGACTGGGCCCGATGGTAAGGAATCGTGA

Upstream 100 bases:

>100_bases
TCAGTTACCCCAATGAAGGTGTCGCCCGGGCCGCGCTCACCCGAGCGATCCACAAGCTGCCGATCAAGGCACGCATTATT
ACTCGAGAGGAGCAGTTCTG

Downstream 100 bases:

>100_bases
TGGCAGAGGCTAAGACCGGCGCGAAGGCGGCGCCTAGGGTGGCTAAGGCCGCCAAGGCGGCCCCCAAGAAGGCCGCACCC
AACGACGCTGAGGCCATAGG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES

Sequences:

>Translated_77_residues
MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES
>Mature_76_residues
AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTVLRERELGLATGPDGKES

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001854
- InterPro:   IPR018254 [H]

Pfam domain/function: PF00831 Ribosomal_L29 [H]

EC number: NA

Molecular weight: Translated: 8859; Mature: 8728

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV
CCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRERELGLATGPDGKES
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AVGVSPGELRELTDEELAERLRESKEELFNLRFQMATGQLNNNRRLRTVRQEIARIYTV
CCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LRERELGLATGPDGKES
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA