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The map label for this gene is ycdQ [C]

Identifier: 148660471

GI number: 148660471

Start: 796825

End: 798237

Strand: Direct

Name: ycdQ [C]

Synonym: MRA_0704

Alternate gene names: 148660471

Gene position: 796825-798237 (Clockwise)

Preceding gene: 148660470

Following gene: 148660472

Centisome position: 18.03

GC content: 66.38

Gene sequence:

>1413_bases
ATGACCGCGACCCGACTGCCTGACGGGTTCGCCGTCCAGGTTGACCGTCGCGTGCGAGTGCTTGGCGACGGCTCGGCCCT
GCTCGGTGGCTCACCGACCCGGTTGCTGCGGCTGGCTCCCGCCGCACGAGGCCTGCTCTGTGACGGCCGCCTTAAGGTCC
GCGACGAGGTCAGCGCGGAGCTGGCCCGCATCCTGCTGGACGCCACGGTGGCGCATCCACGGCCGCCGAGTGGGCCGTCA
CATCGTGACGTCACCGTCGTTATACCAGTACGGAACAACGCATCTGGTCTGCGGCGTCTGGTGACCTCGTTACGCGGATT
ACGCGTCATCGTGGTCGACGACGGTTCGGCGTGCCCGGTCGAGTCGGACGACTTTGTCGGCGCACATTGCGACATCGAAG
TACTCCACCACCCCCACAGCAAGGGGCCGGCCGCGGCTCGCAACACCGGGCTAGCGGCCTGCACCACCGACTTCGTGGCG
TTCCTGGATTCCGACGTGACGCCGCGGCGGGGATGGTTGGAATCCTTACTCGGCCACTTCTGCGATCCCACCGTCGCACT
CGTCGCACCTCGCATCGTCAGCTTGGTGGAAGGCGAGAACCCGGTAGCTCGCTATGAGGCCCTGCACTCGTCGTTGGACC
TTGGTCAGCGCGAAGCGCCGGTGTTACCGCATAGCACAGTCTCTTACGTGCCGAGCGCCGCCATCGTTTGCCGGAGTTCA
GCCATCCGCGACGTCGGCGGCTTCGACGAGACCATGCACTCCGGGGAAGATGTCGACTTGTGCTGGCGGCTCATCGAGGC
TGGTGCTCGGCTGCGCTACGAGCCAATTGCGCTGGTCGCCCATGACCATCGGACCCAATTGCGGGACTGGATCGCGCGCA
AGGCGTTTTACGGCGGTTCGGCGGCTCCGCTAGCTGTGCGGCACCCGGACAAGACCGCGCCGCTGGTGATTTCGGGCGGG
GCGCTGATGGCGTGGATCCTCATGTCGATCGGCACAGGCCTTGGTCGACTGGCGTCGTTGGTGATCGCGGTGCTGACTGG
TCGCCGGATCGCCAGGGCCATGCGCTGCGCCGAGACGTCGTTCTTGGATGTGCTTGCCGTCGCCACCCGCGGGTTGTGGG
CGGCCGCGCTGCAGCTGGCGTCGGCCATCTGCCGGCACTATTGGCCACTGGCATTGCTCGCGGCCATCCTGTCGCGCCGC
TGTAGGCGGGTGGTGTTGATTGCGGCGGTAGTGGACGGTGTGGTGGATTGGCTTCGCCGCAGGGAGGGCGCCGACGATGA
TGCTGAACCGATTGGGCCGCTGACCTACCTAGTGCTGAAGCGCGTGGACGACTTGGCTTATGGCGCTGGCCTGTGGTACG
GGGTGGTGCGCGAACGTAACATCGGCGCGCTCAAGCCGCAGATTCGTACCTAG

Upstream 100 bases:

>100_bases
TGTGCGCCGAGTCGCCCGGTGGATGCCACAGCCCGACGGGATGTTGACATGACCGCGCCGGCGACGATGCAGAGCGAAGC
GATGAGGAGAAGCGGCGCAG

Downstream 100 bases:

>100_bases
TGTGACTGCGGCGGTCCGGCATAGCGATGTGCTGGTCGTCGGTGCTGGAAGTGCTGGATCGGTTGTTGCCGAGCGTCTTT
CCATGGACTCGAGCTGTGTG

Product: glycosyl transferase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MTATRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLRLAPAARGLLCDGRLKVRDEVSAELARILLDATVAHPRPPSGPS
HRDVTVVIPVRNNASGLRRLVTSLRGLRVIVVDDGSACPVESDDFVGAHCDIEVLHHPHSKGPAAARNTGLAACTTDFVA
FLDSDVTPRRGWLESLLGHFCDPTVALVAPRIVSLVEGENPVARYEALHSSLDLGQREAPVLPHSTVSYVPSAAIVCRSS
AIRDVGGFDETMHSGEDVDLCWRLIEAGARLRYEPIALVAHDHRTQLRDWIARKAFYGGSAAPLAVRHPDKTAPLVISGG
ALMAWILMSIGTGLGRLASLVIAVLTGRRIARAMRCAETSFLDVLAVATRGLWAAALQLASAICRHYWPLALLAAILSRR
CRRVVLIAAVVDGVVDWLRRREGADDDAEPIGPLTYLVLKRVDDLAYGAGLWYGVVRERNIGALKPQIRT

Sequences:

>Translated_470_residues
MTATRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLRLAPAARGLLCDGRLKVRDEVSAELARILLDATVAHPRPPSGPS
HRDVTVVIPVRNNASGLRRLVTSLRGLRVIVVDDGSACPVESDDFVGAHCDIEVLHHPHSKGPAAARNTGLAACTTDFVA
FLDSDVTPRRGWLESLLGHFCDPTVALVAPRIVSLVEGENPVARYEALHSSLDLGQREAPVLPHSTVSYVPSAAIVCRSS
AIRDVGGFDETMHSGEDVDLCWRLIEAGARLRYEPIALVAHDHRTQLRDWIARKAFYGGSAAPLAVRHPDKTAPLVISGG
ALMAWILMSIGTGLGRLASLVIAVLTGRRIARAMRCAETSFLDVLAVATRGLWAAALQLASAICRHYWPLALLAAILSRR
CRRVVLIAAVVDGVVDWLRRREGADDDAEPIGPLTYLVLKRVDDLAYGAGLWYGVVRERNIGALKPQIRT
>Mature_469_residues
TATRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLRLAPAARGLLCDGRLKVRDEVSAELARILLDATVAHPRPPSGPSH
RDVTVVIPVRNNASGLRRLVTSLRGLRVIVVDDGSACPVESDDFVGAHCDIEVLHHPHSKGPAAARNTGLAACTTDFVAF
LDSDVTPRRGWLESLLGHFCDPTVALVAPRIVSLVEGENPVARYEALHSSLDLGQREAPVLPHSTVSYVPSAAIVCRSSA
IRDVGGFDETMHSGEDVDLCWRLIEAGARLRYEPIALVAHDHRTQLRDWIARKAFYGGSAAPLAVRHPDKTAPLVISGGA
LMAWILMSIGTGLGRLASLVIAVLTGRRIARAMRCAETSFLDVLAVATRGLWAAALQLASAICRHYWPLALLAAILSRRC
RRVVLIAAVVDGVVDWLRRREGADDDAEPIGPLTYLVLKRVDDLAYGAGLWYGVVRERNIGALKPQIRT

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 50667; Mature: 50536

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLRLAPAARGLLCDGRLKVRDEVSAE
CCCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHCHHHCCEEECCCCCHHHHHHHH
LARILLDATVAHPRPPSGPSHRDVTVVIPVRNNASGLRRLVTSLRGLRVIVVDDGSACPV
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCC
ESDDFVGAHCDIEVLHHPHSKGPAAARNTGLAACTTDFVAFLDSDVTPRRGWLESLLGHF
CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
CDPTVALVAPRIVSLVEGENPVARYEALHSSLDLGQREAPVLPHSTVSYVPSAAIVCRSS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH
AIRDVGGFDETMHSGEDVDLCWRLIEAGARLRYEPIALVAHDHRTQLRDWIARKAFYGGS
HHHHCCCCHHHHCCCCCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCC
AAPLAVRHPDKTAPLVISGGALMAWILMSIGTGLGRLASLVIAVLTGRRIARAMRCAETS
CCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLDVLAVATRGLWAAALQLASAICRHYWPLALLAAILSRRCRRVVLIAAVVDGVVDWLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGADDDAEPIGPLTYLVLKRVDDLAYGAGLWYGVVRERNIGALKPQIRT
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TATRLPDGFAVQVDRRVRVLGDGSALLGGSPTRLLRLAPAARGLLCDGRLKVRDEVSAE
CCCCCCCCCEEEECCEEEEEECCCEECCCCHHHHHHHCHHHCCEEECCCCCHHHHHHHH
LARILLDATVAHPRPPSGPSHRDVTVVIPVRNNASGLRRLVTSLRGLRVIVVDDGSACPV
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCC
ESDDFVGAHCDIEVLHHPHSKGPAAARNTGLAACTTDFVAFLDSDVTPRRGWLESLLGHF
CCCCCCCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
CDPTVALVAPRIVSLVEGENPVARYEALHSSLDLGQREAPVLPHSTVSYVPSAAIVCRSS
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHH
AIRDVGGFDETMHSGEDVDLCWRLIEAGARLRYEPIALVAHDHRTQLRDWIARKAFYGGS
HHHHCCCCHHHHCCCCCHHHHHHHHHHCCCEEECCEEEEECCHHHHHHHHHHHHHHCCCC
AAPLAVRHPDKTAPLVISGGALMAWILMSIGTGLGRLASLVIAVLTGRRIARAMRCAETS
CCCEEEECCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLDVLAVATRGLWAAALQLASAICRHYWPLALLAAILSRRCRRVVLIAAVVDGVVDWLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REGADDDAEPIGPLTYLVLKRVDDLAYGAGLWYGVVRERNIGALKPQIRT
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7836301 [H]