Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
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Accession | NC_009525 |
Length | 4,419,977 |
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The map label for this gene is 148660001
Identifier: 148660001
GI number: 148660001
Start: 288260
End: 288433
Strand: Reverse
Name: 148660001
Synonym: MRA_0245
Alternate gene names: NA
Gene position: 288433-288260 (Counterclockwise)
Preceding gene: 148660006
Following gene: 148660000
Centisome position: 6.53
GC content: 64.94
Gene sequence:
>174_bases ATGAACCGGATCGTCGCGCCCGCCGCCGCAAGCGTGGTGGTTGGTCTGTTGCTGGGCGCGGCCGCGATCTTCGGAGTGAC CCTGATGGTGCAGCAGGACAAGAAACCGCCACTCCCCGGGGGCGATCCGTCGTCATCAGTGCTCAACCGGGTCGAGTACG GTAACCGTAGCTAG
Upstream 100 bases:
>100_bases ACGGTGGCGCATACGCTCCGGGTTGGGGGGCCAGGCCCACGCTTCTGCTAAGTTGCCTCTAGCCTCTCAAGCCGCACCCA CAGCCGTCGAGGAGCCACCG
Downstream 100 bases:
>100_bases CCCCGCGACCCGGGCGCCGCAGGCTGAGGCGGCCTCCGGGTCGCAGGTGGCGCCGTTGTCTCGCAAATGGCTGCCGGTGG TCGGCGCGGTAGCGTTGGCG
Product: small secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 57; Mature: 57
Protein sequence:
>57_residues MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS
Sequences:
>Translated_57_residues MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS >Mature_57_residues MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y236A_MYCTU (P0A5C5)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - RefSeq: NP_334654.1 - RefSeq: YP_177619.1 - EnsemblBacteria: EBMYCT00000001746 - EnsemblBacteria: EBMYCT00000071117 - GeneID: 3205106 - GeneID: 923148 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0250 - KEGG: mtu:Rv0236A - TIGR: MT0250 - TubercuList: Rv0236A - GeneTree: EBGT00050000017178 - HOGENOM: HBG567351 - OMA: FGITVMV - ProtClustDB: CLSK799408 - InterPro: IPR022566
Pfam domain/function: PF11021 DUF2613
EC number: NA
Molecular weight: Translated: 5834; Mature: 5834
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MNRIVAPAAASVVVGLLLGAAAIFGVTLMVQQDKKPPLPGGDPSSSVLNRVEYGNRS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036; 12368430