Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
---|---|
Accession | NC_009525 |
Length | 4,419,977 |
Click here to switch to the map view.
The map label for this gene is 148659988
Identifier: 148659988
GI number: 148659988
Start: 269225
End: 269989
Strand: Reverse
Name: 148659988
Synonym: MRA_0232
Alternate gene names: NA
Gene position: 269989-269225 (Counterclockwise)
Preceding gene: 148659990
Following gene: 148659987
Centisome position: 6.11
GC content: 66.93
Gene sequence:
>765_bases GTGGCGGTCACCGATGTGTTCGCGCGACGGGCGACACTGCGGCGCTCGCTGCGACTGCTGGCAGACTTCCGCTACGAGCA GCGCGACCCGGCACGGTTCTATCGCACACTGGCGGCCGACACCGCAGCAATGATCGGCGATCTGTGGCTGGCCACACATA GCGAGCCGCCAGTTGGCCGTACGCTGCTCGACGTTGGCGGCGGGCCGGGGTATTTCGCGACGGCGTTCTCCGACGCCGGT GTCGGCTACATCGGCGTCGAGCCGGACCCTGATGAAATGCATGCCGCCGGACCTGCGTTCACCGGCCGGCCCGGCATGTT CGTCCGGGCGTCAGGCATGGCACTGCCGTTCGCCGACGACTCGGTAGACATCTGCTTGTCCTCCAATGTCGCCGAACACG TGCCGCGCCCCTGGCAGCTTGGCACCGAGATGCTGCGGGTGACCAAGCCAGGCGGGTTGGTCGTGCTGTCCTACACGGTT TGGCTGGGGCCATTCGGCGGGCACGAGATGGGCCTCAGCCACTACCTCGGCGGCGCCCGCGCCGCCGCCCGATATGTCCG CAAACACGGCCATCCGGCAAAGAACAACTATGGGTCGTCGTTGTTTGCCGTGTCCGCCGCCGAGGGTCTGCGCTGGGCTG CCGGCACCGGAGCCGCGTTAGCCGTATTTCCCCGCTACCACCCCAGATGGGCGTGGTGGCTGACATCCGTCCCGGTGCTG CGTGAGTTCCTGGTGAGCAATCTGGTATTGGTGCTCACACCCTAA
Upstream 100 bases:
>100_bases CCGCCCCCCTGGGGGTGCCCGATGTCGCGCCAGCACAGCAGCAACACCGAGCGCAGAGCAGACATTGGTCGATAGCCTAG CGGGCCGTAGGGTGTGCCAG
Downstream 100 bases:
>100_bases TAATGGAACACGTTCTCGTTTCGCGTTCGGCTTGGGTAGGGTGACGCCATGACCGCCGGCGACGATGCCGAGCGCAGCGA TGAGGAGGAGCGGCGCATAT
Product: putative methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MAVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMIGDLWLATHSEPPVGRTLLDVGGGPGYFATAFSDAG VGYIGVEPDPDEMHAAGPAFTGRPGMFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTV WLGPFGGHEMGLSHYLGGARAAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVFPRYHPRWAWWLTSVPVL REFLVSNLVLVLTP
Sequences:
>Translated_254_residues MAVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMIGDLWLATHSEPPVGRTLLDVGGGPGYFATAFSDAG VGYIGVEPDPDEMHAAGPAFTGRPGMFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTV WLGPFGGHEMGLSHYLGGARAAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVFPRYHPRWAWWLTSVPVL REFLVSNLVLVLTP >Mature_253_residues AVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMIGDLWLATHSEPPVGRTLLDVGGGPGYFATAFSDAGV GYIGVEPDPDEMHAAGPAFTGRPGMFVRASGMALPFADDSVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTVW LGPFGGHEMGLSHYLGGARAAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVFPRYHPRWAWWLTSVPVLR EFLVSNLVLVLTP
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y224_MYCTU (P96406)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: F70961 - RefSeq: NP_214738.1 - RefSeq: NP_334641.1 - ProteinModelPortal: P96406 - SMR: P96406 - EnsemblBacteria: EBMYCT00000002238 - EnsemblBacteria: EBMYCT00000069015 - GeneID: 886715 - GeneID: 923130 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0234 - KEGG: mtu:Rv0224c - TIGR: MT0234 - TubercuList: Rv0224c - GeneTree: EBGT00050000014604 - HOGENOM: HBG429288 - OMA: GHETGLW - ProtClustDB: CLSK871773 - GO: GO:0040007 - InterPro: IPR013216
Pfam domain/function: PF08241 Methyltransf_11
EC number: NA
Molecular weight: Translated: 27511; Mature: 27380
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMIGDLWLATHSEPPVGR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC TLLDVGGGPGYFATAFSDAGVGYIGVEPDPDEMHAAGPAFTGRPGMFVRASGMALPFADD EEEECCCCCCEEEEEECCCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEECCEEECCCCC SVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTVWLGPFGGHEMGLSHYLGGAR CEEEEECCCHHHHCCCCHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHCHHH AAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVFPRYHPRWAWWLTSVPVL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHH REFLVSNLVLVLTP HHHHHCCEEEEECC >Mature Secondary Structure AVTDVFARRATLRRSLRLLADFRYEQRDPARFYRTLAADTAAMIGDLWLATHSEPPVGR CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCC TLLDVGGGPGYFATAFSDAGVGYIGVEPDPDEMHAAGPAFTGRPGMFVRASGMALPFADD EEEECCCCCCEEEEEECCCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEECCEEECCCCC SVDICLSSNVAEHVPRPWQLGTEMLRVTKPGGLVVLSYTVWLGPFGGHEMGLSHYLGGAR CEEEEECCCHHHHCCCCHHHHHHHEEEECCCCEEEEEEEEEECCCCCCHHHHHHHHCHHH AAARYVRKHGHPAKNNYGSSLFAVSAAEGLRWAAGTGAALAVFPRYHPRWAWWLTSVPVL HHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEECCCCCEEEECCCCCCCHHHHHHHHHHH REFLVSNLVLVLTP HHHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036