| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148659867
Identifier: 148659867
GI number: 148659867
Start: 123675
End: 125189
Strand: Direct
Name: 148659867
Synonym: MRA_0109
Alternate gene names: NA
Gene position: 123675-125189 (Clockwise)
Preceding gene: 148659865
Following gene: 148659869
Centisome position: 2.8
GC content: 63.83
Gene sequence:
>1515_bases GTGACGCCCGTCACAACGTTTCCTCTCGTGGACGCGATCCTCGCTGGTCGCGACCGCAACCTTGACGGCGTTATCTTGAT CGCCGCCCAACACCTGCTGCAAACAACGCACGCCATGCTGCGTTCGCTATTTCGGGTCGGCCTCGATCCGCGCAACGTCG CGGTGATCGGCAAGTGCTATTCCACTCACCCGGGAGTTGTCGACGCGATGCGGGCCGACGGCATCTATGTCGACGATTGC AGCGACGCCTACGCACCCCACGAATCATTCGACACCCAGTACACCCGCCACGTAGAACGGTTTTTCGCCGAATCCTGGGC GCGGCTTACGGCCGGGCGTACGGCTCGTGTCGTGCTCCTCGACGACGGCGGATCGCTGCTAGCCGTCGCCGGCGCCATGC TCGATGCGAGCGCCGACGTGATCGGAATCGAGCAGACGTCCGCCGGCTACGCCAAAATCGTCGGTTGTGCGCTGGGGTTT CCCGTCATCAACATCGCCCGCTCGTCGGCAAAGCTTCTATACGAGTCGCCGATCATCGCCGCACGCGTGACACAGACGGC ATTCGAGCGCACCGCGGGCATCGACTCAAGCGCAGCGATCCTGATCACCGGCGCGGGCGCAATCGGCACTGCCCTGGCCG ATGTGCTGCGTCCGCTGCATGACCGGGTGGACGTGTACGACACGCGCTCCGGCTGTATGACGCCCATCGATCTTCCGAAT GCGATCGGCGGCTATGACGTGATCATCGGTGCCACCGGCGCCACCAGTGTGCCCGCCAGCATGCACGAATTGCTGCGCCC CGGCGTATTGCTGATGTCGGCGTCTTCGTCCGATCGCGAGTTCGATGCCGTCGCGTTGCGTCGGCGCACGACGCCCAATC CTGACTGCCATGCCGACCTCAGGGTAGCCGACGGCAGTGTCGACGCTACCTTGTTGAATTCGGGCTTCCCGGTCAACTTT GACGGTTCGCCCATGTGCGGCGATGCGTCGATGGCGCTCACGATGGCGTTGTTGGCGGCCGCGGTGTTGTATGCGTCGGT CGCGGTCGCCGACGAAATGTCATCCGATCATCCGCATCTCGGGCTGATCGACCAGGGCGACATCGTGGCATCGTTTCTGA ACATCGACGTCCCGCTCCAAGCTCTCAGCCGGCTACCGTTGCTTTCGATCGATGGGTATCGCCGCCTTCAGGTGCGCTCC GGCTATACCTTGTTCCGCCAAGGTGAGCGGGCCGACCACTTCTTTGTCATCGAATCCGGCGAGCTTGAGGCGCTCGTCGA CGGGAAGGTCATCCTTAGACTCGGTGCCGGAGACCACTTCGGCGAGGCGTGTTTGCTCGGTGGCATGCGGCGCATAGCGA CGGTGCGGGCATGTGAGCCATCGGTCCTGTGGGAGCTCGACGGCAAGGCTTTCGGCGACGCGCTGCATGGGGACGCTGCA ATGCGTGAGATCGCCTACGGTGTCGCTCGCACCCGGCTCATGCACGCCGGCGCGTCCGAGTCCTTGATGGTGTAA
Upstream 100 bases:
>100_bases TCGTAAGCAGGCGGTAATCGGTTCCCTATGGCCCGCTGGATGCACTGGCGATGGATTCTTTTGGTCCGATTTCTGCGGTT GGCGTGCTAGGTTTCCGACT
Downstream 100 bases:
>100_bases CGGTCTTGCACTCGTGGGCTGTCGGCGGATCACGGGATCGTTATGCCGGTTCTTGCGAGTGACATAGGTTGACATACGTA TAACCGGTCCCTGCGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDC SDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGF PVINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNF DGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRS GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA MREIAYGVARTRLMHAGASESLMV
Sequences:
>Translated_504_residues MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDC SDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGF PVINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNF DGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRS GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA MREIAYGVARTRLMHAGASESLMV >Mature_503_residues TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCS DAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFP VINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNA IGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFD GSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSG YTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAM REIAYGVARTRLMHAGASESLMV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y104_MYCTU (Q10898)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: H70751 - RefSeq: NP_214618.1 - RefSeq: NP_334521.1 - ProteinModelPortal: Q10898 - SMR: Q10898 - EnsemblBacteria: EBMYCT00000002355 - EnsemblBacteria: EBMYCT00000071075 - GeneID: 886923 - GeneID: 922963 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0113 - KEGG: mtu:Rv0104 - TIGR: MT0113 - TubercuList: Rv0104 - GeneTree: EBGT00050000014789 - HOGENOM: HBG565119 - OMA: LETTHAM - ProtClustDB: CLSK871756 - GO: GO:0005488 - InterPro: IPR018490 - InterPro: IPR000595 - InterPro: IPR016040 - InterPro: IPR014710 - Gene3D: G3DSA:3.40.50.720 - Gene3D: G3DSA:2.60.120.10 - SMART: SM00100
Pfam domain/function: PF00027 cNMP_binding; SSF51206 cNMP_binding
EC number: NA
Molecular weight: Translated: 53452; Mature: 53320
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1bc841d4)-; HASH(0x1bdf2cbc)-; HASH(0x1bdd767c)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY CCCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL CCCCCHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEE DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA ECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL CCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEE RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL EEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG EEECCCHHHHHHHCCCCCHHHHHCCCEEECCCCEEEEEECCCCEEECCCCCCEEEEEECC ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA CEEEEECCEEEEEECCCCCCCHHHHHCCHHHHHHHHCCCCCEEEEECCCHHCCHHCCHHH MREIAYGVARTRLMHAGASESLMV HHHHHHHHHHHHHHHCCCCCCCCH >Mature Secondary Structure TPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCY CCCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEC STHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLL CCCCCHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEE DDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIA ECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPN HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC AIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADL CCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEE RVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHL EEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE GLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESG EEECCCHHHHHHHCCCCCHHHHHCCCEEECCCCEEEEEECCCCEEECCCCCCEEEEEECC ELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAA CEEEEECCEEEEEECCCCCCCHHHHHCCHHHHHHHHCCCCCEEEEECCCHHCCHHCCHHH MREIAYGVARTRLMHAGASESLMV HHHHHHHHHHHHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036