| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148659842
Identifier: 148659842
GI number: 148659842
Start: 90380
End: 90838
Strand: Direct
Name: 148659842
Synonym: MRA_0084
Alternate gene names: NA
Gene position: 90380-90838 (Clockwise)
Preceding gene: 148659841
Following gene: 148659843
Centisome position: 2.04
GC content: 68.85
Gene sequence:
>459_bases ATGAGCCCGGGCTCGCGGCGCGCCAGCCCGCAAAGCGCCCGGGAGGTGGTCGAGCTCGACCGTGACGAGGCGATGCGGTT GCTGGCCAGCGTTGACCATGGGCGTGTGGTGTTCACCCGCGCGGCGCTGCCGGCGATCCGTCCAGTCAATCACCTCGTGG TCGACGGTCGGGTGATCGGGCGCACCCGCCTGACGGCCAAGGTGTCCGTTGCGGTGCGATCGAGCGCCGATGCCGGTGTC GTGGTCGCCTACGAAGCCGACGACCTTGATCCGCGGCGTCGGACGGGGTGGAGTGTGGTGGTGACGGGACTGGCGACCGA GGTCAGCGATCCCGAGCAGGTTGCCCGCTACCAGCGGCTGCTACACCCGTGGGTGAACATGGCGATGGACACCGTGGTCG CGATCGAACCCGAGATCGTCACCGGCATCCGCATCGTTGCTGACTCGCGTACGCCGTAG
Upstream 100 bases:
>100_bases CCGACCAGGCCACCGGCCGCGGCCAGCTGCTCTACTCCCGCTACGACGGCAACCTCGGGTTGATCACCCCGACCGGTGAC GGCGTTGCCGACGGTCTGGC
Downstream 100 bases:
>100_bases CCGATTGGCCGCGGGCGGCCCGCACGCATCCGCACTATCTGATAAATTCTTCAACTCGTCAACCGATGTAACGCTGAAGC TCTCAGGAGACGCGGTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGV VVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Sequences:
>Translated_152_residues MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGV VVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP >Mature_151_residues SPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVV VAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRLLHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y0080_MYCTU (O53625)
Other databases:
- EMBL: BX842572 - EMBL: AE000516 - PIR: A70850 - RefSeq: NP_214594.1 - RefSeq: NP_334498.1 - ProteinModelPortal: O53625 - SMR: O53625 - EnsemblBacteria: EBMYCT00000000107 - EnsemblBacteria: EBMYCT00000072042 - GeneID: 886966 - GeneID: 922860 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0087 - KEGG: mtu:Rv0080 - TIGR: MT0087 - TubercuList: Rv0080 - GeneTree: EBGT00050000016633 - HOGENOM: HBG572403 - OMA: RVIVRTR - ProtClustDB: CLSK790245 - InterPro: IPR012349 - InterPro: IPR009002 - Gene3D: G3DSA:2.30.110.10
Pfam domain/function: SSF50475 FMN_binding
EC number: NA
Molecular weight: Translated: 16574; Mature: 16443
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCEEEC RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL CEEEEEEEEEEEECCCCCCEEEEEECCCCCCCHHCCCEEEEEEHHCCCCCHHHHHHHHHH LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP HHHHHHHHHHHHEEECCCHHEEEEEEECCCCC >Mature Secondary Structure SPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIG CCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCEEEC RTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL CEEEEEEEEEEEECCCCCCEEEEEECCCCCCCHHCCCEEEEEEHHCCCCCHHHHHHHHHH LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP HHHHHHHHHHHHEEECCCHHEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036